RNA–Protein interactions for RNA: ENST00000584550.1

GGA3-219, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 5

Gene GGA3, Length 598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-219ENST00000584550 C9orf153Q5TBE3 101 aa5.76□□□□□ -1.49
GGA3-219ENST00000584550 SEC61BP60468 96 aaKnown RBP5.75□□□□□ -1.49
GGA3-219ENST00000584550 HSD52Q0P140 79 aa5.75□□□□□ -1.49
GGA3-219ENST00000584550 RAB37Q96AX2 223 aa5.75□□□□□ -1.49
GGA3-219ENST00000584550 K7ERU9 68 aa5.74□□□□□ -1.49
GGA3-219ENST00000584550 CFC1BP0CG36 223 aa5.74□□□□□ -1.49
GGA3-219ENST00000584550 CFC1P0CG37 223 aa5.74□□□□□ -1.49
GGA3-219ENST00000584550 GTF2H5Q6ZYL4 71 aa5.74□□□□□ -1.49
GGA3-219ENST00000584550 CEND1Q8N111 149 aa5.74□□□□□ -1.49
GGA3-219ENST00000584550 SLC25A20O43772 301 aa5.73□□□□□ -1.49
GGA3-219ENST00000584550 MT1HP80294 61 aa5.73□□□□□ -1.49
GGA3-219ENST00000584550 SPAG11AQ6PDA7 123 aa5.73□□□□□ -1.49
GGA3-219ENST00000584550 SSBP3-AS1Q7Z2R9 100 aa5.73□□□□□ -1.49
GGA3-219ENST00000584550 C9orf118A6NHY6 69 aa5.72□□□□□ -1.49
GGA3-219ENST00000584550 SPRR1BP22528 89 aa5.72□□□□□ -1.49
GGA3-219ENST00000584550 Q1RN00 199 aa5.72□□□□□ -1.49
GGA3-219ENST00000584550 OCIAD2Q56VL3 154 aa5.72□□□□□ -1.49
GGA3-219ENST00000584550 FP248Q71RG6 208 aaPredicted RBP5.72□□□□□ -1.49
GGA3-219ENST00000584550 NHP2Q9NX24 153 aaKnown RBP5.72□□□□□ -1.49
GGA3-219ENST00000584550 LAMTOR3Q9UHA4 124 aa5.72□□□□□ -1.49
GGA3-219ENST00000584550 TEX49A0A1B0GTD5 131 aa5.71□□□□□ -1.5
GGA3-219ENST00000584550 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.71□□□□□ -1.5
GGA3-219ENST00000584550 FXYD2P54710 66 aa5.71□□□□□ -1.5
GGA3-219ENST00000584550 LINC00575Q6W349 94 aa5.71□□□□□ -1.5
GGA3-219ENST00000584550 A0A0B4J2C4 111 aa5.7□□□□□ -1.5
GGA3-219ENST00000584550 TMEM238LA0A1B0GVL6 79 aa5.7□□□□□ -1.5
GGA3-219ENST00000584550 hADV29S1A0JD25 119 aa5.7□□□□□ -1.5
GGA3-219ENST00000584550 A6NJY4 79 aa5.7□□□□□ -1.5
GGA3-219ENST00000584550 K7EP34 96 aa5.7□□□□□ -1.5
GGA3-219ENST00000584550 LORP23490 312 aaPredicted RBP5.69□□□□□ -1.5
GGA3-219ENST00000584550 KRTAP19-2Q3LHN2 52 aa5.69□□□□□ -1.5
GGA3-219ENST00000584550 HRCT1Q6UXD1 115 aa5.69□□□□□ -1.5
GGA3-219ENST00000584550 PRO1854Q9UHT4 67 aa5.69□□□□□ -1.5
GGA3-219ENST00000584550 SPINK1P00995 79 aa5.68□□□□□ -1.5
GGA3-219ENST00000584550 KRTAP10-6P60371 365 aaPredicted RBP5.68□□□□□ -1.5
GGA3-219ENST00000584550 Q6ZQY7 126 aa5.68□□□□□ -1.5
GGA3-219ENST00000584550 Q8N377 158 aa5.68□□□□□ -1.5
GGA3-219ENST00000584550 VPS25Q9BRG1 176 aa5.68□□□□□ -1.5
GGA3-219ENST00000584550 IGLV5-48A0A075B6I7 105 aa5.67□□□□□ -1.5
GGA3-219ENST00000584550 C21orf62-AS1Q17RA5 79 aa5.67□□□□□ -1.5
GGA3-219ENST00000584550 SMIM29Q86T20 159 aa5.67□□□□□ -1.5
GGA3-219ENST00000584550 A0A1W2PPM0 123 aa5.66□□□□□ -1.5
GGA3-219ENST00000584550 K7ERJ3 54 aa5.66□□□□□ -1.5
GGA3-219ENST00000584550 FABP2P12104 132 aa5.66□□□□□ -1.5
GGA3-219ENST00000584550 A0A0G2JQZ4 141 aa5.65□□□□□ -1.5
GGA3-219ENST00000584550 F8WEM9 126 aa5.64□□□□□ -1.51
GGA3-219ENST00000584550 H0YGX0 51 aa5.64□□□□□ -1.51
GGA3-219ENST00000584550 H3BUT2 72 aa5.64□□□□□ -1.51
GGA3-219ENST00000584550 SNCGO76070 127 aa5.64□□□□□ -1.51
GGA3-219ENST00000584550 PSMB2P49721 201 aa5.64□□□□□ -1.51
GGA3-219ENST00000584550 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.64□□□□□ -1.51
GGA3-219ENST00000584550 SPCS1Q9Y6A9 102 aa5.64□□□□□ -1.51
GGA3-219ENST00000584550 M0R2T5 61 aa5.63□□□□□ -1.51
GGA3-219ENST00000584550 FAM218AQ96MZ4 157 aa5.63□□□□□ -1.51
GGA3-219ENST00000584550 J3QR89 54 aa5.62□□□□□ -1.51
GGA3-219ENST00000584550 TRIAP1O43715 76 aa5.62□□□□□ -1.51
GGA3-219ENST00000584550 SCGB1A1P11684 91 aa5.62□□□□□ -1.51
GGA3-219ENST00000584550 RPS29P62273 56 aaKnown RBP5.62□□□□□ -1.51
GGA3-219ENST00000584550 XP32Q5T750 250 aa5.62□□□□□ -1.51
GGA3-219ENST00000584550 CLEC2BQ92478 149 aa5.61□□□□□ -1.51
GGA3-219ENST00000584550 IGLV8-61A0A075B6I0 122 aa5.6□□□□□ -1.51
GGA3-219ENST00000584550 F8W1H4 67 aa5.6□□□□□ -1.51
GGA3-219ENST00000584550 LIMD2Q9BT23 127 aa5.6□□□□□ -1.51
GGA3-219ENST00000584550 PCOTHQ58A44 107 aa5.59□□□□□ -1.51
GGA3-219ENST00000584550 COX6CP09669 75 aa5.58□□□□□ -1.52
GGA3-219ENST00000584550 CD164Q04900 197 aa5.58□□□□□ -1.52
GGA3-219ENST00000584550 LYRM7Q5U5X0 104 aa5.58□□□□□ -1.52
GGA3-219ENST00000584550 PPDPFLQ8WWR9 84 aa5.58□□□□□ -1.52
GGA3-219ENST00000584550 SCGB1C2P0DMR2 95 aa5.57□□□□□ -1.52
GGA3-219ENST00000584550 A0A1B0GX51 115 aa5.56□□□□□ -1.52
GGA3-219ENST00000584550 DNAL4O96015 105 aa5.56□□□□□ -1.52
GGA3-219ENST00000584550 NDUFV3P56181 108 aaKnown RBP5.56□□□□□ -1.52
GGA3-219ENST00000584550 Q6JHZ5 121 aa5.56□□□□□ -1.52
GGA3-219ENST00000584550 IGFL1Q6UW32 110 aa5.56□□□□□ -1.52
GGA3-219ENST00000584550 SSPOA2VEC9 5147 aa5.55□□□□□ -1.52
GGA3-219ENST00000584550 A0A1B0GV72 72 aa5.54□□□□□ -1.52
GGA3-219ENST00000584550 GHRHP01286 108 aa5.54□□□□□ -1.52
GGA3-219ENST00000584550 NAA38Q9BRA0 125 aaKnown RBP5.54□□□□□ -1.52
GGA3-219ENST00000584550 FLGP20930 4061 aaPredicted RBP5.53□□□□□ -1.52
GGA3-219ENST00000584550 USH2AO75445 5202 aa5.53□□□□□ -1.52
GGA3-219ENST00000584550 TCL1BO95988 128 aa5.53□□□□□ -1.52
GGA3-219ENST00000584550 SIGMAR1Q99720 223 aa5.53□□□□□ -1.52
GGA3-219ENST00000584550 ORMDL1Q9P0S3 153 aa5.53□□□□□ -1.52
GGA3-219ENST00000584550 H3BMG7 143 aa5.52□□□□□ -1.53
GGA3-219ENST00000584550 C1orf195Q5TG92 126 aa5.52□□□□□ -1.53
GGA3-219ENST00000584550 PRO0461Q9UI25 63 aa5.52□□□□□ -1.53
GGA3-219ENST00000584550 TRBV20-1A0A075B6N2 111 aa5.51□□□□□ -1.53
GGA3-219ENST00000584550 TRBV7-7A0A0K0K1E9 115 aa5.51□□□□□ -1.53
GGA3-219ENST00000584550 C9orf92A6NGG3 77 aa5.51□□□□□ -1.53
GGA3-219ENST00000584550 Q5XG85 94 aa5.51□□□□□ -1.53
GGA3-219ENST00000584550 COX6B2Q6YFQ2 88 aa5.51□□□□□ -1.53
GGA3-219ENST00000584550 MTURNQ8N3F0 131 aa5.5□□□□□ -1.53
GGA3-219ENST00000584550 H3BQ85 93 aa5.49□□□□□ -1.53
GGA3-219ENST00000584550 TMEM256-PLSCR3K7ERE1 68 aa5.49□□□□□ -1.53
GGA3-219ENST00000584550 LST1O00453 97 aa5.49□□□□□ -1.53
GGA3-219ENST00000584550 TRACP01848 142 aa5.49□□□□□ -1.53
GGA3-219ENST00000584550 ETDBQ3ZM63 59 aa5.47□□□□□ -1.53
GGA3-219ENST00000584550 ANKRD29Q8N6D5 301 aa5.47□□□□□ -1.53
GGA3-219ENST00000584550 BAALC-AS2P0C853 105 aa5.46□□□□□ -1.54
GGA3-219ENST00000584550 ATXN8Q156A1 80 aa5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms