RNA–Protein interactions for RNA: ENST00000583800.1

SMCHD1-210, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 5

Gene SMCHD1, Length 865 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-210ENST00000583800 NDUFC2O95298 119 aa4.19□□□□□ -1.74
SMCHD1-210ENST00000583800 SOSTDC1Q6X4U4 206 aa4.19□□□□□ -1.74
SMCHD1-210ENST00000583800 J3QQQ9 107 aa4.18□□□□□ -1.74
SMCHD1-210ENST00000583800 M0R2T5 61 aa4.18□□□□□ -1.74
SMCHD1-210ENST00000583800 Q1RN00 199 aa4.18□□□□□ -1.74
SMCHD1-210ENST00000583800 LGALS3P17931 250 aaKnown RBP4.17□□□□□ -1.74
SMCHD1-210ENST00000583800 SPRR1BP22528 89 aa4.17□□□□□ -1.74
SMCHD1-210ENST00000583800 APOC3P02656 99 aa4.16□□□□□ -1.74
SMCHD1-210ENST00000583800 NMUP48645 174 aa4.16□□□□□ -1.74
SMCHD1-210ENST00000583800 HERVK_113P61574 105 aa4.16□□□□□ -1.74
SMCHD1-210ENST00000583800 LCE1EQ5T753 118 aa4.16□□□□□ -1.74
SMCHD1-210ENST00000583800 PMCHL2Q9BQD1 86 aa4.16□□□□□ -1.74
SMCHD1-210ENST00000583800 SMIM26A0A096LP01 95 aa4.15□□□□□ -1.75
SMCHD1-210ENST00000583800 H7C2G1 150 aa4.15□□□□□ -1.75
SMCHD1-210ENST00000583800 LEPROTL1O95214 131 aa4.15□□□□□ -1.75
SMCHD1-210ENST00000583800 PLNP26678 52 aa4.15□□□□□ -1.75
SMCHD1-210ENST00000583800 HINT1P49773 126 aaPredicted RBP4.15□□□□□ -1.75
SMCHD1-210ENST00000583800 SLC25A34Q6PIV7 304 aa4.15□□□□□ -1.75
SMCHD1-210ENST00000583800 COX6B2Q6YFQ2 88 aa4.15□□□□□ -1.75
SMCHD1-210ENST00000583800 YPEL4Q96NS1 127 aa4.15□□□□□ -1.75
SMCHD1-210ENST00000583800 LAMTOR3Q9UHA4 124 aa4.15□□□□□ -1.75
SMCHD1-210ENST00000583800 DPM2O94777 84 aa4.14□□□□□ -1.75
SMCHD1-210ENST00000583800 IGKCP01834 107 aa4.14□□□□□ -1.75
SMCHD1-210ENST00000583800 RPL37P61927 97 aaKnown RBP4.14□□□□□ -1.75
SMCHD1-210ENST00000583800 OR13C6PQ8NH95 151 aa4.14□□□□□ -1.75
SMCHD1-210ENST00000583800 SVBPQ8N300 66 aa4.13□□□□□ -1.75
SMCHD1-210ENST00000583800 SSPOA2VEC9 5147 aa4.12□□□□□ -1.75
SMCHD1-210ENST00000583800 A0A0G2JQZ4 141 aa4.12□□□□□ -1.75
SMCHD1-210ENST00000583800 PSPHP1O15172 72 aa4.12□□□□□ -1.75
SMCHD1-210ENST00000583800 NDUFS5O43920 106 aa4.12□□□□□ -1.75
SMCHD1-210ENST00000583800 FABP4P15090 132 aa4.12□□□□□ -1.75
SMCHD1-210ENST00000583800 ELOF1P60002 83 aaKnown RBP4.12□□□□□ -1.75
SMCHD1-210ENST00000583800 C1orf195Q5TG92 126 aa4.12□□□□□ -1.75
SMCHD1-210ENST00000583800 DEFB105AQ8NG35 78 aa4.12□□□□□ -1.75
SMCHD1-210ENST00000583800 PRO1933Q9H354 126 aa4.12□□□□□ -1.75
SMCHD1-210ENST00000583800 SPANXCQ9NY87 97 aa4.12□□□□□ -1.75
SMCHD1-210ENST00000583800 TRGC2P03986 189 aa4.11□□□□□ -1.75
SMCHD1-210ENST00000583800 COX7BP24311 80 aa4.11□□□□□ -1.75
SMCHD1-210ENST00000583800 NDUFA5Q16718 116 aa4.11□□□□□ -1.75
SMCHD1-210ENST00000583800 C4orf26Q17RF5 130 aa4.11□□□□□ -1.75
SMCHD1-210ENST00000583800 C6orf99Q4VX62 202 aa4.11□□□□□ -1.75
SMCHD1-210ENST00000583800 CEND1Q8N111 149 aa4.11□□□□□ -1.75
SMCHD1-210ENST00000583800 LINC00308Q8TCZ7 52 aa4.11□□□□□ -1.75
SMCHD1-210ENST00000583800 HSPB8Q9UJY1 196 aa4.11□□□□□ -1.75
SMCHD1-210ENST00000583800 USH2AO75445 5202 aa4.11□□□□□ -1.75
SMCHD1-210ENST00000583800 Q5XG85 94 aa4.1□□□□□ -1.75
SMCHD1-210ENST00000583800 SPANXDQ9BXN6 97 aa4.1□□□□□ -1.75
SMCHD1-210ENST00000583800 TEX49A0A1B0GTD5 131 aa4.09□□□□□ -1.75
SMCHD1-210ENST00000583800 AKR1D1P51857 326 aa4.09□□□□□ -1.75
SMCHD1-210ENST00000583800 PRO0628Q9UI54 55 aa4.08□□□□□ -1.76
SMCHD1-210ENST00000583800 KRTAP16-1A8MUX0 517 aa4.07□□□□□ -1.76
SMCHD1-210ENST00000583800 TIMM17BO60830 172 aa4.07□□□□□ -1.76
SMCHD1-210ENST00000583800 PSMB2P49721 201 aa4.07□□□□□ -1.76
SMCHD1-210ENST00000583800 Q6Q795 121 aa4.07□□□□□ -1.76
SMCHD1-210ENST00000583800 CAMK2N1Q7Z7J9 78 aa4.07□□□□□ -1.76
SMCHD1-210ENST00000583800 TTTY13Q9BZ97 58 aa4.07□□□□□ -1.76
SMCHD1-210ENST00000583800 IGLV5-48A0A075B6I7 105 aa4.06□□□□□ -1.76
SMCHD1-210ENST00000583800 ZNF815PA8K554 130 aa4.06□□□□□ -1.76
SMCHD1-210ENST00000583800 IGHV6-1A0A0B4J1U7 121 aa4.05□□□□□ -1.76
SMCHD1-210ENST00000583800 TRBV7-6A0A0J9YX20 115 aa4.04□□□□□ -1.76
SMCHD1-210ENST00000583800 SYS1-DBNDD2H3BUS1 97 aa4.04□□□□□ -1.76
SMCHD1-210ENST00000583800 TCL1BO95988 128 aa4.04□□□□□ -1.76
SMCHD1-210ENST00000583800 PCP2Q8IVA1 136 aa4.03□□□□□ -1.76
SMCHD1-210ENST00000583800 LINC01545Q5VT33 79 aa4.02□□□□□ -1.77
SMCHD1-210ENST00000583800 C8orf87E5RJ46 101 aa4.01□□□□□ -1.77
SMCHD1-210ENST00000583800 ATP11AUNQ6ZP68 121 aa4.01□□□□□ -1.77
SMCHD1-210ENST00000583800 OBSCN-AS1Q96MR7 158 aa4.01□□□□□ -1.77
SMCHD1-210ENST00000583800 SYNE2Q8WXH0 6885 aaKnown RBP4□□□□□ -1.77
SMCHD1-210ENST00000583800 FCGBPQ9Y6R7 5405 aaPredicted RBP4□□□□□ -1.77
SMCHD1-210ENST00000583800 F8WEM9 126 aa4□□□□□ -1.77
SMCHD1-210ENST00000583800 SCGB1D4Q6XE38 83 aa4□□□□□ -1.77
SMCHD1-210ENST00000583800 NHP2Q9NX24 153 aaKnown RBP4□□□□□ -1.77
SMCHD1-210ENST00000583800 RBM12B-AS1Q9P1G2 102 aa4□□□□□ -1.77
SMCHD1-210ENST00000583800 TRBV7-7A0A0K0K1E9 115 aa3.99□□□□□ -1.77
SMCHD1-210ENST00000583800 COLCA2A8K830 154 aa3.99□□□□□ -1.77
SMCHD1-210ENST00000583800 KRTAP5-1Q6L8H4 278 aa3.99□□□□□ -1.77
SMCHD1-210ENST00000583800 MUSTN1Q8IVN3 82 aa3.99□□□□□ -1.77
SMCHD1-210ENST00000583800 SMIM11BQ8TCY0 68 aa3.99□□□□□ -1.77
SMCHD1-210ENST00000583800 IFITM1P13164 125 aa3.98□□□□□ -1.77
SMCHD1-210ENST00000583800 IGFL1Q6UW32 110 aa3.98□□□□□ -1.77
SMCHD1-210ENST00000583800 COPS9Q8WXC6 57 aa3.98□□□□□ -1.77
SMCHD1-210ENST00000583800 CLEC2BQ92478 149 aa3.98□□□□□ -1.77
SMCHD1-210ENST00000583800 C20orf202A1L168 122 aa3.97□□□□□ -1.77
SMCHD1-210ENST00000583800 HIST1H2BKO60814 126 aa3.97□□□□□ -1.77
SMCHD1-210ENST00000583800 HIST1H2BJP06899 126 aa3.97□□□□□ -1.77
SMCHD1-210ENST00000583800 C3orf79P0CE67 100 aa3.97□□□□□ -1.77
SMCHD1-210ENST00000583800 HIST1H2BOP23527 126 aa3.97□□□□□ -1.77
SMCHD1-210ENST00000583800 HIST1H2BBP33778 126 aa3.97□□□□□ -1.77
SMCHD1-210ENST00000583800 HIST1H2BDP58876 126 aa3.97□□□□□ -1.77
SMCHD1-210ENST00000583800 HIST1H2BCP62807 126 aa3.97□□□□□ -1.77
SMCHD1-210ENST00000583800 HIST2H2BEQ16778 126 aa3.97□□□□□ -1.77
SMCHD1-210ENST00000583800 HIST2H2BFQ5QNW6 126 aaPredicted RBP3.97□□□□□ -1.77
SMCHD1-210ENST00000583800 Q6ZQY7 126 aa3.97□□□□□ -1.77
SMCHD1-210ENST00000583800 HIST1H2BHQ93079 126 aa3.97□□□□□ -1.77
SMCHD1-210ENST00000583800 HIST1H2BNQ99877 126 aa3.97□□□□□ -1.77
SMCHD1-210ENST00000583800 HIST1H2BMQ99879 126 aa3.97□□□□□ -1.77
SMCHD1-210ENST00000583800 MACF1Q9UPN3 7388 aaKnown RBP3.97□□□□□ -1.77
SMCHD1-210ENST00000583800 TRAV13-2A0A0B4J235 113 aa3.96□□□□□ -1.78
SMCHD1-210ENST00000583800 Q6JHZ5 121 aa3.96□□□□□ -1.78
SMCHD1-210ENST00000583800 Q96NJ1 140 aa3.96□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms