RNA–Protein interactions for RNA: ENST00000582331.2

CCDC47-205, Transcript of coiled-coil domain containing 47, humanhuman

TSL 3

Gene CCDC47, Length 693 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-205ENST00000582331 ATXN8Q156A1 80 aa4.41□□□□□ -1.7
CCDC47-205ENST00000582331 TRAV13-2A0A0B4J235 113 aa4.4□□□□□ -1.71
CCDC47-205ENST00000582331 C9JAW5 83 aa4.4□□□□□ -1.71
CCDC47-205ENST00000582331 LST1O00453 97 aa4.4□□□□□ -1.71
CCDC47-205ENST00000582331 COX6CP09669 75 aa4.4□□□□□ -1.71
CCDC47-205ENST00000582331 RPL28P46779 137 aaKnown RBP4.4□□□□□ -1.71
CCDC47-205ENST00000582331 LINC00304Q8N9R0 145 aa4.4□□□□□ -1.71
CCDC47-205ENST00000582331 CLEC2BQ92478 149 aa4.4□□□□□ -1.71
CCDC47-205ENST00000582331 TRBV10-2A0A0K0K1G8 114 aa4.39□□□□□ -1.71
CCDC47-205ENST00000582331 NDUFC2-KCTD14E9PQ53 114 aa4.39□□□□□ -1.71
CCDC47-205ENST00000582331 SLC25A20O43772 301 aa4.39□□□□□ -1.71
CCDC47-205ENST00000582331 C9orf129Q5T035 196 aaKnown RBP4.39□□□□□ -1.71
CCDC47-205ENST00000582331 TEN1Q86WV5 123 aa4.39□□□□□ -1.71
CCDC47-205ENST00000582331 KRTAP9-8Q9BYQ0 159 aa4.39□□□□□ -1.71
CCDC47-205ENST00000582331 ANAPC11Q9NYG5 84 aa4.39□□□□□ -1.71
CCDC47-205ENST00000582331 C22orf24Q9Y442 160 aa4.39□□□□□ -1.71
CCDC47-205ENST00000582331 NDUFC2O95298 119 aa4.38□□□□□ -1.71
CCDC47-205ENST00000582331 KRTAP13-2Q52LG2 175 aa4.38□□□□□ -1.71
CCDC47-205ENST00000582331 ANKRD29Q8N6D5 301 aa4.38□□□□□ -1.71
CCDC47-205ENST00000582331 Q8NDZ9 215 aa4.38□□□□□ -1.71
CCDC47-205ENST00000582331 SMIM11BQ8TCY0 68 aa4.38□□□□□ -1.71
CCDC47-205ENST00000582331 PPDPFLQ8WWR9 84 aa4.38□□□□□ -1.71
CCDC47-205ENST00000582331 H3BT86 120 aa4.37□□□□□ -1.71
CCDC47-205ENST00000582331 BCE1O60756 84 aa4.37□□□□□ -1.71
CCDC47-205ENST00000582331 ASB16-AS1Q495Z4 193 aa4.37□□□□□ -1.71
CCDC47-205ENST00000582331 FAM218AQ96MZ4 157 aa4.37□□□□□ -1.71
CCDC47-205ENST00000582331 TRACP01848 142 aa4.36□□□□□ -1.71
CCDC47-205ENST00000582331 FAM229BQ4G0N7 80 aa4.36□□□□□ -1.71
CCDC47-205ENST00000582331 VPS25Q9BRG1 176 aa4.36□□□□□ -1.71
CCDC47-205ENST00000582331 KRTAP4-1Q9BYQ7 146 aa4.36□□□□□ -1.71
CCDC47-205ENST00000582331 H0YGX0 51 aa4.35□□□□□ -1.71
CCDC47-205ENST00000582331 J3QR89 54 aa4.35□□□□□ -1.71
CCDC47-205ENST00000582331 OR13C6PQ8NH95 151 aa4.35□□□□□ -1.71
CCDC47-205ENST00000582331 CBY1Q9Y3M2 126 aa4.35□□□□□ -1.71
CCDC47-205ENST00000582331 SEC61BP60468 96 aaKnown RBP4.34□□□□□ -1.71
CCDC47-205ENST00000582331 MRPL55Q7Z7F7 128 aaKnown RBP4.34□□□□□ -1.71
CCDC47-205ENST00000582331 BAALC-AS2P0C853 105 aa4.33□□□□□ -1.72
CCDC47-205ENST00000582331 FP248Q71RG6 208 aaPredicted RBP4.33□□□□□ -1.72
CCDC47-205ENST00000582331 TMEM126AQ9H061 195 aa4.33□□□□□ -1.72
CCDC47-205ENST00000582331 XAGE1AQ9HD64 81 aa4.33□□□□□ -1.72
CCDC47-205ENST00000582331 TEX49A0A1B0GTD5 131 aa4.32□□□□□ -1.72
CCDC47-205ENST00000582331 RPL37AP8A6NKH3 93 aa4.32□□□□□ -1.72
CCDC47-205ENST00000582331 NCR3O14931 201 aa4.32□□□□□ -1.72
CCDC47-205ENST00000582331 IGLV6-57P01721 117 aa4.32□□□□□ -1.72
CCDC47-205ENST00000582331 UBE2AP49459 152 aa4.32□□□□□ -1.72
CCDC47-205ENST00000582331 KRTAP13-3Q3SY46 172 aa4.32□□□□□ -1.72
CCDC47-205ENST00000582331 LINC00167Q96N53 147 aa4.32□□□□□ -1.72
CCDC47-205ENST00000582331 B5MCH6 92 aa4.31□□□□□ -1.72
CCDC47-205ENST00000582331 VPREB1P12018 145 aa4.31□□□□□ -1.72
CCDC47-205ENST00000582331 SPAG11AQ6PDA7 123 aa4.31□□□□□ -1.72
CCDC47-205ENST00000582331 KRTAP13-1Q8IUC0 172 aa4.31□□□□□ -1.72
CCDC47-205ENST00000582331 A0A1B0GX51 115 aa4.3□□□□□ -1.72
CCDC47-205ENST00000582331 TRBV10-3A0A0K0K1G6 114 aa4.29□□□□□ -1.72
CCDC47-205ENST00000582331 C6orf99Q4VX62 202 aa4.29□□□□□ -1.72
CCDC47-205ENST00000582331 S100A7L2Q5SY68 101 aa4.29□□□□□ -1.72
CCDC47-205ENST00000582331 SIGMAR1Q99720 223 aa4.29□□□□□ -1.72
CCDC47-205ENST00000582331 M0R378 163 aa4.28□□□□□ -1.72
CCDC47-205ENST00000582331 MT1HP80294 61 aa4.28□□□□□ -1.72
CCDC47-205ENST00000582331 LINC00575Q6W349 94 aa4.28□□□□□ -1.72
CCDC47-205ENST00000582331 C3orf22Q8N5N4 141 aa4.28□□□□□ -1.72
CCDC47-205ENST00000582331 OBSCN-AS1Q96MR7 158 aa4.28□□□□□ -1.72
CCDC47-205ENST00000582331 C21orf62-AS1Q17RA5 79 aa4.27□□□□□ -1.73
CCDC47-205ENST00000582331 TRAV23DV6A0A075B6W5 121 aa4.26□□□□□ -1.73
CCDC47-205ENST00000582331 TRBV7-6A0A0J9YX20 115 aa4.26□□□□□ -1.73
CCDC47-205ENST00000582331 FAM240AA0A1B0GVK7 77 aa4.26□□□□□ -1.73
CCDC47-205ENST00000582331 DNAL4O96015 105 aa4.26□□□□□ -1.73
CCDC47-205ENST00000582331 PRLHP81277 87 aa4.26□□□□□ -1.73
CCDC47-205ENST00000582331 NKAPP1Q8N9T2 125 aa4.26□□□□□ -1.73
CCDC47-205ENST00000582331 ORMDL1Q9P0S3 153 aa4.26□□□□□ -1.73
CCDC47-205ENST00000582331 IGLV5-37A0A075B6J1 123 aa4.25□□□□□ -1.73
CCDC47-205ENST00000582331 ZNF73O43830 326 aaPredicted RBP4.25□□□□□ -1.73
CCDC47-205ENST00000582331 MT-ATP8P03928 68 aa4.25□□□□□ -1.73
CCDC47-205ENST00000582331 PCP4P48539 62 aa4.25□□□□□ -1.73
CCDC47-205ENST00000582331 KRTAP19-2Q3LHN2 52 aa4.25□□□□□ -1.73
CCDC47-205ENST00000582331 FAM19A1Q7Z5A9 133 aa4.25□□□□□ -1.73
CCDC47-205ENST00000582331 hADV29S1A0JD25 119 aa4.24□□□□□ -1.73
CCDC47-205ENST00000582331 SCGB1A1P11684 91 aa4.24□□□□□ -1.73
CCDC47-205ENST00000582331 COX7BP24311 80 aa4.24□□□□□ -1.73
CCDC47-205ENST00000582331 ELOF1P60002 83 aaKnown RBP4.24□□□□□ -1.73
CCDC47-205ENST00000582331 KRTAP10-6P60371 365 aaPredicted RBP4.24□□□□□ -1.73
CCDC47-205ENST00000582331 SPINK1P00995 79 aa4.23□□□□□ -1.73
CCDC47-205ENST00000582331 ACYP1P07311 99 aa4.23□□□□□ -1.73
CCDC47-205ENST00000582331 KCNQ1DNQ9H478 68 aa4.23□□□□□ -1.73
CCDC47-205ENST00000582331 TMEM256-PLSCR3K7ERE1 68 aa4.22□□□□□ -1.73
CCDC47-205ENST00000582331 SNCGO76070 127 aa4.22□□□□□ -1.73
CCDC47-205ENST00000582331 Q8NBF4 154 aa4.22□□□□□ -1.73
CCDC47-205ENST00000582331 C14orf132Q9NPU4 83 aa4.22□□□□□ -1.73
CCDC47-205ENST00000582331 KRTAP4-16G5E9R7 235 aaPredicted RBP4.21□□□□□ -1.74
CCDC47-205ENST00000582331 SPRR1AP35321 89 aa4.21□□□□□ -1.74
CCDC47-205ENST00000582331 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.21□□□□□ -1.74
CCDC47-205ENST00000582331 Q6ZQY7 126 aa4.21□□□□□ -1.74
CCDC47-205ENST00000582331 SPRR4Q96PI1 79 aa4.21□□□□□ -1.74
CCDC47-205ENST00000582331 HIGD2AQ9BW72 106 aa4.21□□□□□ -1.74
CCDC47-205ENST00000582331 JMJD7-PLA2G4BH0Y9G9 81 aa4.2□□□□□ -1.74
CCDC47-205ENST00000582331 H3BQ85 93 aa4.2□□□□□ -1.74
CCDC47-205ENST00000582331 M0R2T5 61 aa4.2□□□□□ -1.74
CCDC47-205ENST00000582331 GAGE2AQ6NT46 116 aa4.2□□□□□ -1.74
CCDC47-205ENST00000582331 SMCR5Q8TEV8 140 aa4.2□□□□□ -1.74
CCDC47-205ENST00000582331 PRYO14603 147 aa4.19□□□□□ -1.74
CCDC47-205ENST00000582331 CCKP06307 115 aa4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 80.3 ms