RNA–Protein interactions for RNA: ENST00000581536.5

TOP3A-211, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 766 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-211ENST00000581536 IFITM1P13164 125 aa5.45□□□□□ -1.54
TOP3A-211ENST00000581536 ELOF1P60002 83 aaKnown RBP5.45□□□□□ -1.54
TOP3A-211ENST00000581536 Q8N377 158 aa5.45□□□□□ -1.54
TOP3A-211ENST00000581536 VAMP8Q9BV40 100 aa5.45□□□□□ -1.54
TOP3A-211ENST00000581536 CBY1Q9Y3M2 126 aa5.45□□□□□ -1.54
TOP3A-211ENST00000581536 SPRR1BP22528 89 aa5.44□□□□□ -1.54
TOP3A-211ENST00000581536 HRCT1Q6UXD1 115 aa5.44□□□□□ -1.54
TOP3A-211ENST00000581536 DHRS4-AS1Q9P1J3 65 aa5.44□□□□□ -1.54
TOP3A-211ENST00000581536 TAL2Q16559 108 aa5.43□□□□□ -1.54
TOP3A-211ENST00000581536 Q6ZVH6 145 aa5.43□□□□□ -1.54
TOP3A-211ENST00000581536 A0A0G2JQZ4 141 aa5.42□□□□□ -1.54
TOP3A-211ENST00000581536 Q1RN00 199 aa5.42□□□□□ -1.54
TOP3A-211ENST00000581536 KRTAP13-3Q3SY46 172 aa5.42□□□□□ -1.54
TOP3A-211ENST00000581536 FP248Q71RG6 208 aaPredicted RBP5.42□□□□□ -1.54
TOP3A-211ENST00000581536 SMIM11BQ8TCY0 68 aa5.42□□□□□ -1.54
TOP3A-211ENST00000581536 FAT4Q6V0I7 4981 aa5.41□□□□□ -1.54
TOP3A-211ENST00000581536 TRBV7-6A0A0J9YX20 115 aa5.41□□□□□ -1.54
TOP3A-211ENST00000581536 LINC01547P58512 204 aaPredicted RBP5.41□□□□□ -1.54
TOP3A-211ENST00000581536 SMIM29Q86T20 159 aa5.41□□□□□ -1.54
TOP3A-211ENST00000581536 COPS9Q8WXC6 57 aa5.41□□□□□ -1.54
TOP3A-211ENST00000581536 SNHG12Q9BXW3 62 aa5.41□□□□□ -1.54
TOP3A-211ENST00000581536 A4D1N5 150 aa5.4□□□□□ -1.54
TOP3A-211ENST00000581536 HSBP1L1C9JCN9 74 aa5.4□□□□□ -1.54
TOP3A-211ENST00000581536 SLC25A20O43772 301 aa5.4□□□□□ -1.54
TOP3A-211ENST00000581536 UQCR10Q9UDW1 63 aa5.4□□□□□ -1.54
TOP3A-211ENST00000581536 LAMTOR3Q9UHA4 124 aa5.4□□□□□ -1.54
TOP3A-211ENST00000581536 TRAV13-2A0A0B4J235 113 aa5.39□□□□□ -1.55
TOP3A-211ENST00000581536 TEX49A0A1B0GTD5 131 aa5.39□□□□□ -1.55
TOP3A-211ENST00000581536 A0A1B0GWB2 263 aa5.39□□□□□ -1.55
TOP3A-211ENST00000581536 RPS29P62273 56 aaKnown RBP5.39□□□□□ -1.55
TOP3A-211ENST00000581536 COL5A1-AS1Q5SY13 56 aa5.39□□□□□ -1.55
TOP3A-211ENST00000581536 PAM16Q9Y3D7 125 aa5.39□□□□□ -1.55
TOP3A-211ENST00000581536 SPATA45Q537H7 98 aa5.38□□□□□ -1.55
TOP3A-211ENST00000581536 H7C2G1 150 aa5.37□□□□□ -1.55
TOP3A-211ENST00000581536 SLC25A34Q6PIV7 304 aa5.37□□□□□ -1.55
TOP3A-211ENST00000581536 KRTAP4-1Q9BYQ7 146 aa5.37□□□□□ -1.55
TOP3A-211ENST00000581536 IGLV5-48A0A075B6I7 105 aa5.36□□□□□ -1.55
TOP3A-211ENST00000581536 DLEU1O43261 78 aa5.36□□□□□ -1.55
TOP3A-211ENST00000581536 COX8AP10176 69 aa5.36□□□□□ -1.55
TOP3A-211ENST00000581536 LINC00575Q6W349 94 aa5.35□□□□□ -1.55
TOP3A-211ENST00000581536 HIST1H4GQ99525 98 aa5.35□□□□□ -1.55
TOP3A-211ENST00000581536 ASB16-AS1Q495Z4 193 aa5.34□□□□□ -1.55
TOP3A-211ENST00000581536 VAMP3Q15836 100 aa5.33□□□□□ -1.56
TOP3A-211ENST00000581536 BATFQ16520 125 aa5.33□□□□□ -1.56
TOP3A-211ENST00000581536 MPLKIPQ8TAP9 179 aa5.33□□□□□ -1.56
TOP3A-211ENST00000581536 hADV29S1A0JD25 119 aa5.32□□□□□ -1.56
TOP3A-211ENST00000581536 C9orf92A6NGG3 77 aa5.32□□□□□ -1.56
TOP3A-211ENST00000581536 CFC1BP0CG36 223 aa5.32□□□□□ -1.56
TOP3A-211ENST00000581536 CFC1P0CG37 223 aa5.32□□□□□ -1.56
TOP3A-211ENST00000581536 CD164Q04900 197 aa5.32□□□□□ -1.56
TOP3A-211ENST00000581536 Q8N9P0 234 aaPredicted RBP5.32□□□□□ -1.56
TOP3A-211ENST00000581536 A0A0U1RQV1 116 aa5.31□□□□□ -1.56
TOP3A-211ENST00000581536 IGKV2-30P06310 120 aa5.31□□□□□ -1.56
TOP3A-211ENST00000581536 Q6ZQY7 126 aa5.31□□□□□ -1.56
TOP3A-211ENST00000581536 LIMD2Q9BT23 127 aa5.31□□□□□ -1.56
TOP3A-211ENST00000581536 NHP2Q9NX24 153 aaKnown RBP5.31□□□□□ -1.56
TOP3A-211ENST00000581536 C1orf195Q5TG92 126 aa5.3□□□□□ -1.56
TOP3A-211ENST00000581536 C2orf91Q6ZV80 131 aa5.3□□□□□ -1.56
TOP3A-211ENST00000581536 SEC61BP60468 96 aaKnown RBP5.29□□□□□ -1.56
TOP3A-211ENST00000581536 KRTAP5-3Q6L8H2 238 aa5.29□□□□□ -1.56
TOP3A-211ENST00000581536 HIGD1BQ9P298 99 aa5.28□□□□□ -1.56
TOP3A-211ENST00000581536 Q5XG85 94 aa5.27□□□□□ -1.57
TOP3A-211ENST00000581536 UBE2V1Q13404 147 aa5.26□□□□□ -1.57
TOP3A-211ENST00000581536 OCIAD2Q56VL3 154 aa5.26□□□□□ -1.57
TOP3A-211ENST00000581536 BVES-AS1Q5T3Y7 98 aa5.26□□□□□ -1.57
TOP3A-211ENST00000581536 IGFL1Q6UW32 110 aa5.26□□□□□ -1.57
TOP3A-211ENST00000581536 CEND1Q8N111 149 aa5.26□□□□□ -1.57
TOP3A-211ENST00000581536 RAB37Q96AX2 223 aa5.26□□□□□ -1.57
TOP3A-211ENST00000581536 FAM218AQ96MZ4 157 aa5.26□□□□□ -1.57
TOP3A-211ENST00000581536 PCOTHQ58A44 107 aa5.25□□□□□ -1.57
TOP3A-211ENST00000581536 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.25□□□□□ -1.57
TOP3A-211ENST00000581536 IGLV8-61A0A075B6I0 122 aa5.24□□□□□ -1.57
TOP3A-211ENST00000581536 F8WEM9 126 aa5.24□□□□□ -1.57
TOP3A-211ENST00000581536 FXYD2P54710 66 aa5.24□□□□□ -1.57
TOP3A-211ENST00000581536 A0A0B4J2C4 111 aa5.23□□□□□ -1.57
TOP3A-211ENST00000581536 H3BUT2 72 aa5.23□□□□□ -1.57
TOP3A-211ENST00000581536 PCP4P48539 62 aa5.22□□□□□ -1.57
TOP3A-211ENST00000581536 PRO1854Q9UHT4 67 aa5.22□□□□□ -1.57
TOP3A-211ENST00000581536 TRBV7-7A0A0K0K1E9 115 aa5.21□□□□□ -1.58
TOP3A-211ENST00000581536 H0YGX0 51 aa5.21□□□□□ -1.58
TOP3A-211ENST00000581536 TCL1BO95988 128 aa5.21□□□□□ -1.58
TOP3A-211ENST00000581536 HSD52Q0P140 79 aa5.21□□□□□ -1.58
TOP3A-211ENST00000581536 Q6JHZ5 121 aa5.21□□□□□ -1.58
TOP3A-211ENST00000581536 CLEC2BQ92478 149 aa5.21□□□□□ -1.58
TOP3A-211ENST00000581536 TAX1BP3O14907 124 aa5.2□□□□□ -1.58
TOP3A-211ENST00000581536 NDUFV3P56181 108 aaKnown RBP5.19□□□□□ -1.58
TOP3A-211ENST00000581536 KRTAP19-2Q3LHN2 52 aa5.19□□□□□ -1.58
TOP3A-211ENST00000581536 GTF2H5Q6ZYL4 71 aa5.19□□□□□ -1.58
TOP3A-211ENST00000581536 PPDPFLQ8WWR9 84 aa5.19□□□□□ -1.58
TOP3A-211ENST00000581536 K7ERJ3 54 aa5.18□□□□□ -1.58
TOP3A-211ENST00000581536 K7ERU9 68 aa5.17□□□□□ -1.58
TOP3A-211ENST00000581536 RPL37P61927 97 aaKnown RBP5.17□□□□□ -1.58
TOP3A-211ENST00000581536 FABP2P12104 132 aa5.16□□□□□ -1.58
TOP3A-211ENST00000581536 H3BMG7 143 aa5.15□□□□□ -1.59
TOP3A-211ENST00000581536 SNCGO76070 127 aa5.15□□□□□ -1.59
TOP3A-211ENST00000581536 FLGP20930 4061 aaPredicted RBP5.14□□□□□ -1.59
TOP3A-211ENST00000581536 K7EP34 96 aa5.14□□□□□ -1.59
TOP3A-211ENST00000581536 LST1O00453 97 aa5.14□□□□□ -1.59
TOP3A-211ENST00000581536 OBSCN-AS1Q96MR7 158 aa5.14□□□□□ -1.59
TOP3A-211ENST00000581536 A0A1B0GV72 72 aa5.13□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms