RNA–Protein interactions for RNA: ENST00000581487.1

CMTM4-205, Transcript of CKLF like MARVEL transmembrane domain containing 4, humanhuman

Gene CMTM4, Length 7,026 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM4-205ENST00000581487 A0A0G2JQZ4 141 aa4.83□□□□□ -1.64
CMTM4-205ENST00000581487 Q8N9P0 234 aaPredicted RBP4.83□□□□□ -1.64
CMTM4-205ENST00000581487 FAM168BA1KXE4 195 aa4.82□□□□□ -1.64
CMTM4-205ENST00000581487 SPATA8Q6RVD6 105 aa4.82□□□□□ -1.64
CMTM4-205ENST00000581487 PRR34Q9NV39 138 aa4.82□□□□□ -1.64
CMTM4-205ENST00000581487 ZNF861PO60384 105 aa4.82□□□□□ -1.64
CMTM4-205ENST00000581487 KRTAP24-1Q3LI83 254 aa4.82□□□□□ -1.64
CMTM4-205ENST00000581487 SEC61BP60468 96 aaKnown RBP4.82□□□□□ -1.64
CMTM4-205ENST00000581487 KCNQ1DNQ9H478 68 aa4.82□□□□□ -1.64
CMTM4-205ENST00000581487 NDUFAF8A1L188 74 aa4.81□□□□□ -1.64
CMTM4-205ENST00000581487 M0QZ58 72 aa4.81□□□□□ -1.64
CMTM4-205ENST00000581487 CSMD1Q96PZ7 3565 aa4.81□□□□□ -1.64
CMTM4-205ENST00000581487 PKD1L2Q7Z442 2459 aa4.81□□□□□ -1.64
CMTM4-205ENST00000581487 CFAP54Q96N23 3096 aa4.8□□□□□ -1.64
CMTM4-205ENST00000581487 POLQO75417 2590 aa4.8□□□□□ -1.64
CMTM4-205ENST00000581487 PRRC2CQ9Y520 2896 aaKnown RBP4.79□□□□□ -1.64
CMTM4-205ENST00000581487 LINC01558Q9Y6Z2 57 aa4.79□□□□□ -1.64
CMTM4-205ENST00000581487 VPS13AQ96RL7 3174 aa4.79□□□□□ -1.64
CMTM4-205ENST00000581487 C15orf56Q8N910 161 aa4.78□□□□□ -1.64
CMTM4-205ENST00000581487 LAMA5O15230 3695 aa4.77□□□□□ -1.65
CMTM4-205ENST00000581487 ZFHX3Q15911 3703 aa4.77□□□□□ -1.65
CMTM4-205ENST00000581487 ANAPC11Q9NYG5 84 aa4.76□□□□□ -1.65
CMTM4-205ENST00000581487 DNAH10OSP0CZ25 163 aa4.76□□□□□ -1.65
CMTM4-205ENST00000581487 ZCCHC13Q8WW36 166 aaKnown RBP4.75□□□□□ -1.65
CMTM4-205ENST00000581487 EPG5Q9HCE0 2579 aa4.74□□□□□ -1.65
CMTM4-205ENST00000581487 SPENQ96T58 3664 aaKnown RBP4.74□□□□□ -1.65
CMTM4-205ENST00000581487 KRTAP10-3P60369 221 aa4.74□□□□□ -1.65
CMTM4-205ENST00000581487 FLNBO75369 2602 aaKnown RBP4.73□□□□□ -1.65
CMTM4-205ENST00000581487 ACANP16112 2415 aa4.72□□□□□ -1.65
CMTM4-205ENST00000581487 LOC400499M0QZD8 3231 aa4.71□□□□□ -1.66
CMTM4-205ENST00000581487 ANKRD17O75179 2603 aaKnown RBP4.71□□□□□ -1.66
CMTM4-205ENST00000581487 SMG1Q96Q15 3661 aaKnown RBP4.7□□□□□ -1.66
CMTM4-205ENST00000581487 PRUNE2Q8WUY3 3088 aa4.7□□□□□ -1.66
CMTM4-205ENST00000581487 RPL37P61927 97 aaKnown RBP4.69□□□□□ -1.66
CMTM4-205ENST00000581487 KRTAP1-3Q8IUG1 177 aa4.68□□□□□ -1.66
CMTM4-205ENST00000581487 CHD9Q3L8U1 2897 aa4.68□□□□□ -1.66
CMTM4-205ENST00000581487 KRTAP10-11P60412 298 aa4.68□□□□□ -1.66
CMTM4-205ENST00000581487 A0A087WTM6 91 aa4.68□□□□□ -1.66
CMTM4-205ENST00000581487 CASC10Q5T4H9 136 aa4.68□□□□□ -1.66
CMTM4-205ENST00000581487 Q8NDZ9 215 aa4.68□□□□□ -1.66
CMTM4-205ENST00000581487 MGAQ8IWI9 3026 aa4.67□□□□□ -1.66
CMTM4-205ENST00000581487 CHD7Q9P2D1 2997 aa4.67□□□□□ -1.66
CMTM4-205ENST00000581487 CNBPP62633 177 aaKnown RBP4.66□□□□□ -1.66
CMTM4-205ENST00000581487 ADM2Q7Z4H4 148 aa4.66□□□□□ -1.66
CMTM4-205ENST00000581487 TNP2Q05952 138 aa4.66□□□□□ -1.66
CMTM4-205ENST00000581487 KRTAP1-1Q07627 177 aa4.66□□□□□ -1.66
CMTM4-205ENST00000581487 CR1P17927 2039 aa4.66□□□□□ -1.66
CMTM4-205ENST00000581487 C10orf95Q9H7T3 257 aa4.65□□□□□ -1.66
CMTM4-205ENST00000581487 A6NN06 94 aa4.64□□□□□ -1.67
CMTM4-205ENST00000581487 ASB16-AS1Q495Z4 193 aa4.64□□□□□ -1.67
CMTM4-205ENST00000581487 HECTD1Q9ULT8 2610 aa4.63□□□□□ -1.67
CMTM4-205ENST00000581487 SPRR4Q96PI1 79 aa4.62□□□□□ -1.67
CMTM4-205ENST00000581487 TRIOO75962 3097 aa4.62□□□□□ -1.67
CMTM4-205ENST00000581487 CFAP47Q6ZTR5 3102 aa4.61□□□□□ -1.67
CMTM4-205ENST00000581487 K7EIL1 84 aa4.6□□□□□ -1.67
CMTM4-205ENST00000581487 A8MU10 97 aa4.59□□□□□ -1.67
CMTM4-205ENST00000581487 Q6ZR54 194 aa4.57□□□□□ -1.68
CMTM4-205ENST00000581487 MMP24-AS1A0A0U1RRL7 71 aa4.57□□□□□ -1.68
CMTM4-205ENST00000581487 KRTAP25-1Q3LHN0 102 aa4.57□□□□□ -1.68
CMTM4-205ENST00000581487 SPRR1AP35321 89 aa4.56□□□□□ -1.68
CMTM4-205ENST00000581487 SPRR1BP22528 89 aa4.54□□□□□ -1.68
CMTM4-205ENST00000581487 USP24Q9UPU5 2620 aa4.54□□□□□ -1.68
CMTM4-205ENST00000581487 TNP1P09430 55 aa4.53□□□□□ -1.68
CMTM4-205ENST00000581487 MGAM2Q2M2H8 2515 aa4.51□□□□□ -1.69
CMTM4-205ENST00000581487 KRTAP26-1Q6PEX3 210 aa4.51□□□□□ -1.69
CMTM4-205ENST00000581487 PP632Q6XCG6 107 aa4.51□□□□□ -1.69
CMTM4-205ENST00000581487 MAST4O15021 2626 aa4.51□□□□□ -1.69
CMTM4-205ENST00000581487 LAMA1P25391 3075 aa4.5□□□□□ -1.69
CMTM4-205ENST00000581487 Q5W150 140 aa4.5□□□□□ -1.69
CMTM4-205ENST00000581487 LINC00472Q9H8W2 130 aa4.48□□□□□ -1.69
CMTM4-205ENST00000581487 TRANK1O15050 2925 aa4.47□□□□□ -1.69
CMTM4-205ENST00000581487 ATRQ13535 2644 aa4.46□□□□□ -1.69
CMTM4-205ENST00000581487 ZNF292O60281 2723 aa4.46□□□□□ -1.7
CMTM4-205ENST00000581487 STAB1Q9NY15 2570 aa4.45□□□□□ -1.7
CMTM4-205ENST00000581487 A8MUU9 505 aa4.44□□□□□ -1.7
CMTM4-205ENST00000581487 KRTAP4-16G5E9R7 235 aaPredicted RBP4.43□□□□□ -1.7
CMTM4-205ENST00000581487 EYSQ5T1H1 3165 aa4.43□□□□□ -1.7
CMTM4-205ENST00000581487 FLNAP21333 2647 aaKnown RBP4.43□□□□□ -1.7
CMTM4-205ENST00000581487 CFAP46Q8IYW2 2715 aa4.43□□□□□ -1.7
CMTM4-205ENST00000581487 FRYLO94915 3013 aa4.43□□□□□ -1.7
CMTM4-205ENST00000581487 HELZ2Q9BYK8 2649 aaKnown RBP4.43□□□□□ -1.7
CMTM4-205ENST00000581487 KRTAP1-5Q9BYS1 174 aa4.42□□□□□ -1.7
CMTM4-205ENST00000581487 ITPR3Q14573 2671 aa4.41□□□□□ -1.7
CMTM4-205ENST00000581487 CUBNO60494 3623 aa4.41□□□□□ -1.7
CMTM4-205ENST00000581487 KRTAP29-1A8MX34 341 aaPredicted RBP4.4□□□□□ -1.7
CMTM4-205ENST00000581487 KRTAP10-8P60410 259 aa4.4□□□□□ -1.7
CMTM4-205ENST00000581487 FRYQ5TBA9 3013 aa4.4□□□□□ -1.7
CMTM4-205ENST00000581487 CENPEQ02224 2701 aa4.39□□□□□ -1.71
CMTM4-205ENST00000581487 PLAC8Q9NZF1 115 aa4.38□□□□□ -1.71
CMTM4-205ENST00000581487 SVEP1Q4LDE5 3571 aa4.37□□□□□ -1.71
CMTM4-205ENST00000581487 TEP1Q99973 2627 aaKnown RBP4.36□□□□□ -1.71
CMTM4-205ENST00000581487 LCE6AA0A183 80 aa4.35□□□□□ -1.71
CMTM4-205ENST00000581487 PANO1I0J062 215 aa4.35□□□□□ -1.71
CMTM4-205ENST00000581487 NBEAQ8NFP9 2946 aa4.35□□□□□ -1.71
CMTM4-205ENST00000581487 SETXQ7Z333 2677 aaKnown RBP4.35□□□□□ -1.71
CMTM4-205ENST00000581487 MAP1AP78559 2803 aaPredicted RBP4.34□□□□□ -1.71
CMTM4-205ENST00000581487 CSMD2Q7Z408 3487 aa4.34□□□□□ -1.71
CMTM4-205ENST00000581487 BOD1L1Q8NFC6 3051 aa4.33□□□□□ -1.72
CMTM4-205ENST00000581487 TNRC18O15417 2968 aaPredicted RBP4.33□□□□□ -1.72
CMTM4-205ENST00000581487 KRTAP7-1Q8IUC3 87 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 115.8 ms