RNA–Protein interactions for RNA: ENST00000580798.1

SMG8-205, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG8, Length 583 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-205ENST00000580798 PTPRQQ9UMZ3 2332 aa1.62□□□□□ -2.15
SMG8-205ENST00000580798 FLG2Q5D862 2391 aaPredicted RBP1.62□□□□□ -2.15
SMG8-205ENST00000580798 OTOGLQ3ZCN5 2332 aa1.61□□□□□ -2.15
SMG8-205ENST00000580798 KNL1Q8NG31 2342 aa1.61□□□□□ -2.15
SMG8-205ENST00000580798 COL6A6A6NMZ7 2263 aa1.6□□□□□ -2.15
SMG8-205ENST00000580798 CACNA1GO43497 2377 aa1.6□□□□□ -2.15
SMG8-205ENST00000580798 A0A0D9SG42 100 aa1.59□□□□□ -2.15
SMG8-205ENST00000580798 J3QKU1 62 aa1.58□□□□□ -2.16
SMG8-205ENST00000580798 HMCN1Q96RW7 5635 aa1.58□□□□□ -2.16
SMG8-205ENST00000580798 KRTAP13-1Q8IUC0 172 aa1.57□□□□□ -2.16
SMG8-205ENST00000580798 NAV3Q8IVL0 2385 aa1.56□□□□□ -2.16
SMG8-205ENST00000580798 H3BUX3 64 aa1.56□□□□□ -2.16
SMG8-205ENST00000580798 TPRP12270 2363 aaKnown RBP1.55□□□□□ -2.16
SMG8-205ENST00000580798 JMJD1CQ15652 2540 aa1.55□□□□□ -2.16
SMG8-205ENST00000580798 CNTRLQ7Z7A1 2325 aa1.55□□□□□ -2.16
SMG8-205ENST00000580798 H0YGG7 62 aa1.54□□□□□ -2.16
SMG8-205ENST00000580798 M0QZ58 72 aa1.54□□□□□ -2.16
SMG8-205ENST00000580798 APELAP0DMC3 54 aa1.54□□□□□ -2.16
SMG8-205ENST00000580798 KRTAP12-4P60329 112 aa1.53□□□□□ -2.16
SMG8-205ENST00000580798 ZDBF2Q9HCK1 2354 aa1.52□□□□□ -2.17
SMG8-205ENST00000580798 BAHCC1Q9P281 2608 aa1.52□□□□□ -2.17
SMG8-205ENST00000580798 STATHP02808 62 aa1.52□□□□□ -2.17
SMG8-205ENST00000580798 PTPRZ1P23471 2315 aaPredicted RBP1.52□□□□□ -2.17
SMG8-205ENST00000580798 FBN1P35555 2871 aaKnown RBP1.52□□□□□ -2.17
SMG8-205ENST00000580798 ROS1P08922 2347 aa1.51□□□□□ -2.17
SMG8-205ENST00000580798 PCNX1Q96RV3 2341 aa1.5□□□□□ -2.17
SMG8-205ENST00000580798 USF3Q68DE3 2245 aa1.5□□□□□ -2.17
SMG8-205ENST00000580798 HTN1P15515 57 aa1.5□□□□□ -2.17
SMG8-205ENST00000580798 RHPN1-AS1Q9BWJ2 59 aa1.5□□□□□ -2.17
SMG8-205ENST00000580798 ALMS1Q8TCU4 4167 aa1.5□□□□□ -2.17
SMG8-205ENST00000580798 PKDREJQ9NTG1 2253 aa1.5□□□□□ -2.17
SMG8-205ENST00000580798 KRTAP12-3P60328 96 aa1.49□□□□□ -2.17
SMG8-205ENST00000580798 PIEZO2Q9H5I5 2752 aa1.49□□□□□ -2.17
SMG8-205ENST00000580798 PLCE1Q9P212 2302 aa1.49□□□□□ -2.17
SMG8-205ENST00000580798 KRTAP6-3Q3LI67 103 aa1.48□□□□□ -2.17
SMG8-205ENST00000580798 COX14Q96I36 57 aa1.47□□□□□ -2.17
SMG8-205ENST00000580798 KRTAP21-3Q3LHN1 58 aa1.46□□□□□ -2.18
SMG8-205ENST00000580798 ZNF462Q96JM2 2506 aa1.45□□□□□ -2.18
SMG8-205ENST00000580798 DEFB135Q30KP9 77 aa1.43□□□□□ -2.18
SMG8-205ENST00000580798 SPART-AS1P0CW21 52 aa1.42□□□□□ -2.18
SMG8-205ENST00000580798 DEFB1P60022 68 aa1.42□□□□□ -2.18
SMG8-205ENST00000580798 IGF2RP11717 2491 aa1.42□□□□□ -2.18
SMG8-205ENST00000580798 TNP1P09430 55 aa1.4□□□□□ -2.19
SMG8-205ENST00000580798 SPINK6Q6UWN8 80 aa1.4□□□□□ -2.19
SMG8-205ENST00000580798 DEFB108BQ8NET1 73 aa1.4□□□□□ -2.19
SMG8-205ENST00000580798 C2CD3Q4AC94 2353 aa1.39□□□□□ -2.19
SMG8-205ENST00000580798 FBN3Q75N90 2809 aa1.38□□□□□ -2.19
SMG8-205ENST00000580798 Q9Y3F1 56 aa1.38□□□□□ -2.19
SMG8-205ENST00000580798 A0A096LNI7 61 aa1.37□□□□□ -2.19
SMG8-205ENST00000580798 SPTBN2O15020 2390 aa1.37□□□□□ -2.19
SMG8-205ENST00000580798 ABCA2Q9BZC7 2435 aa1.36□□□□□ -2.19
SMG8-205ENST00000580798 M0R2T5 61 aa1.36□□□□□ -2.19
SMG8-205ENST00000580798 DEFB136Q30KP8 78 aa1.36□□□□□ -2.19
SMG8-205ENST00000580798 WNK1Q9H4A3 2382 aa1.36□□□□□ -2.19
SMG8-205ENST00000580798 CSPG4Q6UVK1 2322 aa1.35□□□□□ -2.19
SMG8-205ENST00000580798 C9orf92A6NGG3 77 aa1.35□□□□□ -2.19
SMG8-205ENST00000580798 MUC6Q6W4X9 2439 aa1.35□□□□□ -2.19
SMG8-205ENST00000580798 AKAP6Q13023 2319 aa1.34□□□□□ -2.19
SMG8-205ENST00000580798 SPTBN1Q01082 2364 aaKnown RBP1.34□□□□□ -2.19
SMG8-205ENST00000580798 RP1L1Q8IWN7 2480 aaPredicted RBP1.33□□□□□ -2.2
SMG8-205ENST00000580798 DEFB110Q30KQ9 67 aa1.33□□□□□ -2.2
SMG8-205ENST00000580798 CACNA1HO95180 2353 aa1.32□□□□□ -2.2
SMG8-205ENST00000580798 DEFB124Q8NES8 71 aa1.32□□□□□ -2.2
SMG8-205ENST00000580798 KRTAP10-4P60372 401 aaPredicted RBP1.31□□□□□ -2.2
SMG8-205ENST00000580798 DSPP15924 2871 aaKnown RBP1.3□□□□□ -2.2
SMG8-205ENST00000580798 H3BNG1 76 aa1.28□□□□□ -2.2
SMG8-205ENST00000580798 MEGF8Q7Z7M0 2845 aa1.27□□□□□ -2.21
SMG8-205ENST00000580798 F8P00451 2351 aa1.27□□□□□ -2.21
SMG8-205ENST00000580798 PKD1L2Q7Z442 2459 aa1.25□□□□□ -2.21
SMG8-205ENST00000580798 A0A096LPF7 62 aa1.25□□□□□ -2.21
SMG8-205ENST00000580798 ABCA12Q86UK0 2595 aa1.25□□□□□ -2.21
SMG8-205ENST00000580798 ASH1LQ9NR48 2969 aaKnown RBP1.25□□□□□ -2.21
SMG8-205ENST00000580798 CELSR2Q9HCU4 2923 aa1.24□□□□□ -2.21
SMG8-205ENST00000580798 TTC28Q96AY4 2481 aa1.24□□□□□ -2.21
SMG8-205ENST00000580798 SPTA1P02549 2419 aa1.24□□□□□ -2.21
SMG8-205ENST00000580798 REV3LO60673 3130 aa1.24□□□□□ -2.21
SMG8-205ENST00000580798 EP300Q09472 2414 aaPredicted RBP1.23□□□□□ -2.21
SMG8-205ENST00000580798 LINC01556Q5JQF7 62 aa1.23□□□□□ -2.21
SMG8-205ENST00000580798 DEFB133Q30KQ1 61 aa1.22□□□□□ -2.21
SMG8-205ENST00000580798 ACACAQ13085 2346 aa1.22□□□□□ -2.21
SMG8-205ENST00000580798 TRANK1O15050 2925 aa1.21□□□□□ -2.22
SMG8-205ENST00000580798 U3KQA8 63 aa1.21□□□□□ -2.22
SMG8-205ENST00000580798 KRTAP2-3P0C7H8 128 aa1.2□□□□□ -2.22
SMG8-205ENST00000580798 SMR3AQ99954 134 aa1.2□□□□□ -2.22
SMG8-205ENST00000580798 KRTAP2-4Q9BYR9 128 aa1.2□□□□□ -2.22
SMG8-205ENST00000580798 KRTAP2-1Q9BYU5 128 aa1.2□□□□□ -2.22
SMG8-205ENST00000580798 A0A0C4DFX4 3053 aa1.2□□□□□ -2.22
SMG8-205ENST00000580798 GVINP1Q7Z2Y8 2422 aa1.19□□□□□ -2.22
SMG8-205ENST00000580798 PRRC2CQ9Y520 2896 aaKnown RBP1.19□□□□□ -2.22
SMG8-205ENST00000580798 CEP290O15078 2479 aa1.19□□□□□ -2.22
SMG8-205ENST00000580798 COL6A5A8TX70 2615 aa1.18□□□□□ -2.22
SMG8-205ENST00000580798 RPS29P62273 56 aaKnown RBP1.18□□□□□ -2.22
SMG8-205ENST00000580798 APC2O95996 2303 aa1.18□□□□□ -2.22
SMG8-205ENST00000580798 NCOR1O75376 2440 aa1.17□□□□□ -2.22
SMG8-205ENST00000580798 CD52P31358 61 aa1.17□□□□□ -2.22
SMG8-205ENST00000580798 ZNF292O60281 2723 aa1.17□□□□□ -2.22
SMG8-205ENST00000580798 DMBT1Q9UGM3 2413 aaPredicted RBP1.16□□□□□ -2.22
SMG8-205ENST00000580798 TENM1Q9UKZ4 2725 aa1.15□□□□□ -2.23
SMG8-205ENST00000580798 HECTD1Q9ULT8 2610 aa1.15□□□□□ -2.23
SMG8-205ENST00000580798 CHD7Q9P2D1 2997 aa1.14□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms