RNA–Protein interactions for RNA: ENST00000580565.1

CSNK1D-214, Transcript of casein kinase 1 delta, humanhuman

TSL 4

Gene CSNK1D, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-214ENST00000580565 C1orf195Q5TG92 126 aa9.45□□□□□ -0.9
CSNK1D-214ENST00000580565 A4D1N5 150 aa9.44□□□□□ -0.9
CSNK1D-214ENST00000580565 MT1HP80294 61 aa9.42□□□□□ -0.9
CSNK1D-214ENST00000580565 HIST1H4GQ99525 98 aa9.42□□□□□ -0.9
CSNK1D-214ENST00000580565 TRAV13-2A0A0B4J235 113 aa9.41□□□□□ -0.9
CSNK1D-214ENST00000580565 SMIM11BQ8TCY0 68 aa9.41□□□□□ -0.9
CSNK1D-214ENST00000580565 NHP2Q9NX24 153 aaKnown RBP9.41□□□□□ -0.9
CSNK1D-214ENST00000580565 C2orf91Q6ZV80 131 aa9.4□□□□□ -0.9
CSNK1D-214ENST00000580565 HIGD1BQ9P298 99 aa9.4□□□□□ -0.9
CSNK1D-214ENST00000580565 FSIP2Q5CZC0 6907 aa9.38□□□□□ -0.91
CSNK1D-214ENST00000580565 RPL37P61927 97 aaKnown RBP9.36□□□□□ -0.91
CSNK1D-214ENST00000580565 TCL1BO95988 128 aa9.35□□□□□ -0.91
CSNK1D-214ENST00000580565 CFC1BP0CG36 223 aa9.35□□□□□ -0.91
CSNK1D-214ENST00000580565 VAMP3Q15836 100 aa9.35□□□□□ -0.91
CSNK1D-214ENST00000580565 C12orf57Q99622 126 aa9.35□□□□□ -0.91
CSNK1D-214ENST00000580565 F8WEM9 126 aa9.33□□□□□ -0.92
CSNK1D-214ENST00000580565 LINC00575Q6W349 94 aa9.33□□□□□ -0.92
CSNK1D-214ENST00000580565 CRCT1Q9UGL9 99 aa9.33□□□□□ -0.92
CSNK1D-214ENST00000580565 CEND1Q8N111 149 aa9.3□□□□□ -0.92
CSNK1D-214ENST00000580565 CFC1P0CG37 223 aa9.29□□□□□ -0.92
CSNK1D-214ENST00000580565 Q6ZQY7 126 aa9.29□□□□□ -0.92
CSNK1D-214ENST00000580565 UQCR10Q9UDW1 63 aa9.29□□□□□ -0.92
CSNK1D-214ENST00000580565 hADV29S1A0JD25 119 aa9.28□□□□□ -0.92
CSNK1D-214ENST00000580565 Q6JHZ5 121 aa9.28□□□□□ -0.92
CSNK1D-214ENST00000580565 LORP23490 312 aaPredicted RBP9.27□□□□□ -0.93
CSNK1D-214ENST00000580565 A0A0B4J2C4 111 aa9.26□□□□□ -0.93
CSNK1D-214ENST00000580565 SMIM6P0DI80 62 aa9.26□□□□□ -0.93
CSNK1D-214ENST00000580565 FXYD2P54710 66 aa9.26□□□□□ -0.93
CSNK1D-214ENST00000580565 KRTAP10-6P60371 365 aaPredicted RBP9.26□□□□□ -0.93
CSNK1D-214ENST00000580565 HSD52Q0P140 79 aa9.26□□□□□ -0.93
CSNK1D-214ENST00000580565 RAB37Q96AX2 223 aa9.26□□□□□ -0.93
CSNK1D-214ENST00000580565 TRBV7-7A0A0K0K1E9 115 aa9.25□□□□□ -0.93
CSNK1D-214ENST00000580565 LOC105371267A0A1B0GV96 52 aa9.25□□□□□ -0.93
CSNK1D-214ENST00000580565 OCIAD2Q56VL3 154 aa9.25□□□□□ -0.93
CSNK1D-214ENST00000580565 CLEC2BQ92478 149 aa9.25□□□□□ -0.93
CSNK1D-214ENST00000580565 TMEM238LA0A1B0GVL6 79 aa9.24□□□□□ -0.93
CSNK1D-214ENST00000580565 A6NJY4 79 aa9.24□□□□□ -0.93
CSNK1D-214ENST00000580565 M0R2T5 61 aa9.24□□□□□ -0.93
CSNK1D-214ENST00000580565 IGFL1Q6UW32 110 aa9.24□□□□□ -0.93
CSNK1D-214ENST00000580565 COX6B2Q6YFQ2 88 aa9.24□□□□□ -0.93
CSNK1D-214ENST00000580565 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.22□□□□□ -0.93
CSNK1D-214ENST00000580565 PPDPFLQ8WWR9 84 aa9.19□□□□□ -0.94
CSNK1D-214ENST00000580565 PRO1854Q9UHT4 67 aa9.19□□□□□ -0.94
CSNK1D-214ENST00000580565 BVES-AS1Q5T3Y7 98 aa9.18□□□□□ -0.94
CSNK1D-214ENST00000580565 OBSCN-AS1Q96MR7 158 aa9.18□□□□□ -0.94
CSNK1D-214ENST00000580565 SNHG12Q9BXW3 62 aa9.18□□□□□ -0.94
CSNK1D-214ENST00000580565 FLGP20930 4061 aaPredicted RBP9.18□□□□□ -0.94
CSNK1D-214ENST00000580565 K7ERJ3 54 aa9.16□□□□□ -0.94
CSNK1D-214ENST00000580565 ATP11AUNQ6ZP68 121 aa9.16□□□□□ -0.94
CSNK1D-214ENST00000580565 Q75L30 129 aa9.15□□□□□ -0.94
CSNK1D-214ENST00000580565 H3BUT2 72 aa9.14□□□□□ -0.95
CSNK1D-214ENST00000580565 LST1O00453 97 aa9.13□□□□□ -0.95
CSNK1D-214ENST00000580565 H0YGX0 51 aa9.11□□□□□ -0.95
CSNK1D-214ENST00000580565 TRIAP1O43715 76 aa9.1□□□□□ -0.95
CSNK1D-214ENST00000580565 FAM218AQ96MZ4 157 aa9.1□□□□□ -0.95
CSNK1D-214ENST00000580565 TSTD3H0UI37 97 aa9.09□□□□□ -0.95
CSNK1D-214ENST00000580565 Q6Q795 121 aa9.09□□□□□ -0.95
CSNK1D-214ENST00000580565 Q96NJ1 140 aa9.09□□□□□ -0.95
CSNK1D-214ENST00000580565 SNCGO76070 127 aa9.07□□□□□ -0.96
CSNK1D-214ENST00000580565 SS18L2Q9UHA2 77 aa9.07□□□□□ -0.96
CSNK1D-214ENST00000580565 M0R143 59 aa9.06□□□□□ -0.96
CSNK1D-214ENST00000580565 PSMB2P49721 201 aa9.06□□□□□ -0.96
CSNK1D-214ENST00000580565 NDUFV3P56181 108 aaKnown RBP9.05□□□□□ -0.96
CSNK1D-214ENST00000580565 TEN1Q86WV5 123 aa9.05□□□□□ -0.96
CSNK1D-214ENST00000580565 A0A1B0GX51 115 aa9.03□□□□□ -0.96
CSNK1D-214ENST00000580565 C20orf166-AS1Q96NR2 134 aa9.02□□□□□ -0.97
CSNK1D-214ENST00000580565 COX6CP09669 75 aa9.01□□□□□ -0.97
CSNK1D-214ENST00000580565 A0A087WSZ3 146 aa9□□□□□ -0.97
CSNK1D-214ENST00000580565 A8MUU9 505 aa9□□□□□ -0.97
CSNK1D-214ENST00000580565 H3BMG7 143 aa8.99□□□□□ -0.97
CSNK1D-214ENST00000580565 GHRHP01286 108 aa8.96□□□□□ -0.98
CSNK1D-214ENST00000580565 SCGB1C2P0DMR2 95 aa8.96□□□□□ -0.98
CSNK1D-214ENST00000580565 FABP2P12104 132 aa8.96□□□□□ -0.98
CSNK1D-214ENST00000580565 BATFQ16520 125 aa8.96□□□□□ -0.98
CSNK1D-214ENST00000580565 DNAL4O96015 105 aa8.95□□□□□ -0.98
CSNK1D-214ENST00000580565 DSCR10P59022 87 aa8.94□□□□□ -0.98
CSNK1D-214ENST00000580565 NAA38Q9BRA0 125 aaKnown RBP8.94□□□□□ -0.98
CSNK1D-214ENST00000580565 TRBV20-1A0A075B6N2 111 aa8.93□□□□□ -0.98
CSNK1D-214ENST00000580565 A0A1W2PNM2 257 aa8.92□□□□□ -0.98
CSNK1D-214ENST00000580565 ORMDL1Q9P0S3 153 aa8.92□□□□□ -0.98
CSNK1D-214ENST00000580565 TRACP01848 142 aa8.91□□□□□ -0.98
CSNK1D-214ENST00000580565 SIGMAR1Q99720 223 aa8.9□□□□□ -0.98
CSNK1D-214ENST00000580565 KRTAP9-8Q9BYQ0 159 aa8.89□□□□□ -0.99
CSNK1D-214ENST00000580565 H3BQ85 93 aa8.88□□□□□ -0.99
CSNK1D-214ENST00000580565 LINC00313P59037 77 aa8.87□□□□□ -0.99
CSNK1D-214ENST00000580565 TMEM256-PLSCR3K7ERE1 68 aa8.86□□□□□ -0.99
CSNK1D-214ENST00000580565 ANKRD29Q8N6D5 301 aa8.86□□□□□ -0.99
CSNK1D-214ENST00000580565 TRBV7-4A0A0J9YYF1 115 aa8.85□□□□□ -0.99
CSNK1D-214ENST00000580565 KRTAP16-1A8MUX0 517 aa8.85□□□□□ -0.99
CSNK1D-214ENST00000580565 IGKV4-1P06312 121 aa8.85□□□□□ -0.99
CSNK1D-214ENST00000580565 ATXN8Q156A1 80 aa8.84□□□□□ -0.99
CSNK1D-214ENST00000580565 USH2AO75445 5202 aa8.84□□□□□ -0.99
CSNK1D-214ENST00000580565 TAX1BP3O14907 124 aa8.83□□□□□ -1
CSNK1D-214ENST00000580565 A0A1B0GV72 72 aa8.82□□□□□ -1
CSNK1D-214ENST00000580565 UBE2V1Q13404 147 aa8.82□□□□□ -1
CSNK1D-214ENST00000580565 LYRM7Q5U5X0 104 aa8.82□□□□□ -1
CSNK1D-214ENST00000580565 C9orf118A6NHY6 69 aa8.81□□□□□ -1
CSNK1D-214ENST00000580565 BAALC-AS2P0C853 105 aa8.8□□□□□ -1
CSNK1D-214ENST00000580565 NOTCH2NLQ7Z3S9 236 aa8.8□□□□□ -1
CSNK1D-214ENST00000580565 DEFB116Q30KQ4 102 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 117.4 ms