RNA–Protein interactions for RNA: ENST00000580540.1

SREBF1-219, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 4

Gene SREBF1, Length 540 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-219ENST00000580540 ASB16-AS1Q495Z4 193 aa9.19□□□□□ -0.94
SREBF1-219ENST00000580540 C2orf91Q6ZV80 131 aa9.19□□□□□ -0.94
SREBF1-219ENST00000580540 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.18□□□□□ -0.94
SREBF1-219ENST00000580540 C9orf92A6NGG3 77 aa9.17□□□□□ -0.94
SREBF1-219ENST00000580540 XP32Q5T750 250 aa9.17□□□□□ -0.94
SREBF1-219ENST00000580540 CEND1Q8N111 149 aa9.16□□□□□ -0.94
SREBF1-219ENST00000580540 TMA7Q9Y2S6 64 aaKnown RBP9.16□□□□□ -0.94
SREBF1-219ENST00000580540 FAT4Q6V0I7 4981 aa9.16□□□□□ -0.94
SREBF1-219ENST00000580540 A0A0B4J2C4 111 aa9.15□□□□□ -0.94
SREBF1-219ENST00000580540 SNHG12Q9BXW3 62 aa9.15□□□□□ -0.94
SREBF1-219ENST00000580540 OCIAD2Q56VL3 154 aa9.14□□□□□ -0.95
SREBF1-219ENST00000580540 C1orf195Q5TG92 126 aa9.14□□□□□ -0.95
SREBF1-219ENST00000580540 Q5XG85 94 aa9.14□□□□□ -0.95
SREBF1-219ENST00000580540 TMEM238LA0A1B0GVL6 79 aa9.13□□□□□ -0.95
SREBF1-219ENST00000580540 A6NJY4 79 aa9.13□□□□□ -0.95
SREBF1-219ENST00000580540 SNCGO76070 127 aa9.13□□□□□ -0.95
SREBF1-219ENST00000580540 TCL1BO95988 128 aa9.13□□□□□ -0.95
SREBF1-219ENST00000580540 PYY3Q5JQD4 70 aa9.13□□□□□ -0.95
SREBF1-219ENST00000580540 Q6JHZ5 121 aa9.13□□□□□ -0.95
SREBF1-219ENST00000580540 H0YGX0 51 aa9.12□□□□□ -0.95
SREBF1-219ENST00000580540 FXYD2P54710 66 aa9.11□□□□□ -0.95
SREBF1-219ENST00000580540 IGFL1Q6UW32 110 aa9.11□□□□□ -0.95
SREBF1-219ENST00000580540 PRO1854Q9UHT4 67 aa9.11□□□□□ -0.95
SREBF1-219ENST00000580540 PPDPFLQ8WWR9 84 aa9.1□□□□□ -0.95
SREBF1-219ENST00000580540 CLEC2BQ92478 149 aa9.1□□□□□ -0.95
SREBF1-219ENST00000580540 IGLV8-61A0A075B6I0 122 aa9.09□□□□□ -0.95
SREBF1-219ENST00000580540 FAM218AQ96MZ4 157 aa9.09□□□□□ -0.95
SREBF1-219ENST00000580540 KRTAP4-1Q9BYQ7 146 aa9.09□□□□□ -0.95
SREBF1-219ENST00000580540 H3BUT2 72 aa9.08□□□□□ -0.96
SREBF1-219ENST00000580540 TRBV7-7A0A0K0K1E9 115 aa9.06□□□□□ -0.96
SREBF1-219ENST00000580540 HSD52Q0P140 79 aa9.05□□□□□ -0.96
SREBF1-219ENST00000580540 PCOTHQ58A44 107 aa9.04□□□□□ -0.96
SREBF1-219ENST00000580540 K7ERJ3 54 aa9.02□□□□□ -0.97
SREBF1-219ENST00000580540 TRIAP1O43715 76 aa9.02□□□□□ -0.97
SREBF1-219ENST00000580540 FABP2P12104 132 aa9.02□□□□□ -0.97
SREBF1-219ENST00000580540 NDUFV3P56181 108 aaKnown RBP9.02□□□□□ -0.97
SREBF1-219ENST00000580540 PSMB2P49721 201 aa9.01□□□□□ -0.97
SREBF1-219ENST00000580540 LCE2AQ5TA79 106 aaPredicted RBP9.01□□□□□ -0.97
SREBF1-219ENST00000580540 UQCR10Q9UDW1 63 aa9.01□□□□□ -0.97
SREBF1-219ENST00000580540 A0A1B0GX51 115 aa9□□□□□ -0.97
SREBF1-219ENST00000580540 GHRHP01286 108 aa8.99□□□□□ -0.97
SREBF1-219ENST00000580540 H3BMG7 143 aa8.98□□□□□ -0.97
SREBF1-219ENST00000580540 LST1O00453 97 aa8.97□□□□□ -0.97
SREBF1-219ENST00000580540 DNAL4O96015 105 aa8.96□□□□□ -0.98
SREBF1-219ENST00000580540 COX6CP09669 75 aa8.95□□□□□ -0.98
SREBF1-219ENST00000580540 TEN1Q86WV5 123 aa8.94□□□□□ -0.98
SREBF1-219ENST00000580540 A0A1B0GV72 72 aa8.93□□□□□ -0.98
SREBF1-219ENST00000580540 RPL37P61927 97 aaKnown RBP8.93□□□□□ -0.98
SREBF1-219ENST00000580540 ORMDL1Q9P0S3 153 aa8.93□□□□□ -0.98
SREBF1-219ENST00000580540 SS18L2Q9UHA2 77 aa8.93□□□□□ -0.98
SREBF1-219ENST00000580540 Q6Q795 121 aa8.92□□□□□ -0.98
SREBF1-219ENST00000580540 A0A087WSZ3 146 aa8.91□□□□□ -0.98
SREBF1-219ENST00000580540 OBSCN-AS1Q96MR7 158 aa8.91□□□□□ -0.98
SREBF1-219ENST00000580540 SCGB1C2P0DMR2 95 aa8.9□□□□□ -0.98
SREBF1-219ENST00000580540 ANKRD29Q8N6D5 301 aa8.88□□□□□ -0.99
SREBF1-219ENST00000580540 H3BQ85 93 aa8.87□□□□□ -0.99
SREBF1-219ENST00000580540 A0A1W2PNM2 257 aa8.86□□□□□ -0.99
SREBF1-219ENST00000580540 TMEM256-PLSCR3K7ERE1 68 aa8.86□□□□□ -0.99
SREBF1-219ENST00000580540 Q96NJ1 140 aa8.84□□□□□ -0.99
SREBF1-219ENST00000580540 TRACP01848 142 aa8.81□□□□□ -1
SREBF1-219ENST00000580540 LCE2CQ5TA81 110 aa8.81□□□□□ -1
SREBF1-219ENST00000580540 ATP11AUNQ6ZP68 121 aa8.81□□□□□ -1
SREBF1-219ENST00000580540 Q75L30 129 aa8.8□□□□□ -1
SREBF1-219ENST00000580540 SIGMAR1Q99720 223 aa8.8□□□□□ -1
SREBF1-219ENST00000580540 TRBV7-4A0A0J9YYF1 115 aa8.79□□□□□ -1
SREBF1-219ENST00000580540 UBE2V1Q13404 147 aa8.79□□□□□ -1
SREBF1-219ENST00000580540 KRTAP19-2Q3LHN2 52 aa8.79□□□□□ -1
SREBF1-219ENST00000580540 KRTAP9-2Q9BYQ4 174 aa8.79□□□□□ -1
SREBF1-219ENST00000580540 M0R143 59 aa8.78□□□□□ -1
SREBF1-219ENST00000580540 CCKP06307 115 aa8.78□□□□□ -1
SREBF1-219ENST00000580540 VPS25Q9BRG1 176 aa8.77□□□□□ -1.01
SREBF1-219ENST00000580540 IGKV4-1P06312 121 aa8.76□□□□□ -1.01
SREBF1-219ENST00000580540 DSCR10P59022 87 aa8.76□□□□□ -1.01
SREBF1-219ENST00000580540 NAA38Q9BRA0 125 aaKnown RBP8.76□□□□□ -1.01
SREBF1-219ENST00000580540 BAALC-AS2P0C853 105 aa8.75□□□□□ -1.01
SREBF1-219ENST00000580540 SMIM6P0DI80 62 aa8.75□□□□□ -1.01
SREBF1-219ENST00000580540 COX6B2Q6YFQ2 88 aa8.75□□□□□ -1.01
SREBF1-219ENST00000580540 RBM3P98179 157 aaKnown RBP8.74□□□□□ -1.01
SREBF1-219ENST00000580540 DEFB116Q30KQ4 102 aa8.74□□□□□ -1.01
SREBF1-219ENST00000580540 DSCR8Q96T75 97 aa8.73□□□□□ -1.01
SREBF1-219ENST00000580540 MT1HP80294 61 aa8.72□□□□□ -1.01
SREBF1-219ENST00000580540 ATXN8Q156A1 80 aa8.7□□□□□ -1.02
SREBF1-219ENST00000580540 C20orf166-AS1Q96NR2 134 aa8.7□□□□□ -1.02
SREBF1-219ENST00000580540 A8MUU9 505 aa8.69□□□□□ -1.02
SREBF1-219ENST00000580540 LINC00313P59037 77 aa8.69□□□□□ -1.02
SREBF1-219ENST00000580540 BATFQ16520 125 aa8.68□□□□□ -1.02
SREBF1-219ENST00000580540 LINC00472Q9H8W2 130 aa8.68□□□□□ -1.02
SREBF1-219ENST00000580540 C9JAW5 83 aa8.67□□□□□ -1.02
SREBF1-219ENST00000580540 TSTD3H0UI37 97 aa8.67□□□□□ -1.02
SREBF1-219ENST00000580540 IGHV6-1A0A0B4J1U7 121 aa8.65□□□□□ -1.02
SREBF1-219ENST00000580540 M0R2T5 61 aa8.65□□□□□ -1.02
SREBF1-219ENST00000580540 NOTCH2NLQ7Z3S9 236 aa8.64□□□□□ -1.03
SREBF1-219ENST00000580540 LYRM7Q5U5X0 104 aa8.61□□□□□ -1.03
SREBF1-219ENST00000580540 KRTAP16-1A8MUX0 517 aa8.6□□□□□ -1.03
SREBF1-219ENST00000580540 JMJD7-PLA2G4BH0Y9G9 81 aa8.6□□□□□ -1.03
SREBF1-219ENST00000580540 LOC105371267A0A1B0GV96 52 aa8.59□□□□□ -1.03
SREBF1-219ENST00000580540 C21orf62-AS1Q17RA5 79 aa8.58□□□□□ -1.04
SREBF1-219ENST00000580540 Q6ZQT0 140 aa8.58□□□□□ -1.04
SREBF1-219ENST00000580540 A0A1B0GVX0 72 aa8.57□□□□□ -1.04
SREBF1-219ENST00000580540 TRBV20-1A0A075B6N2 111 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms