RNA–Protein interactions for RNA: ENST00000579483.1

MSI2-209, Transcript of musashi RNA binding protein 2, humanhuman

TSL 1 (best)

Gene MSI2, Length 5,141 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSI2-209ENST00000579483 IGLV8-61A0A075B6I0 122 aa6.22□□□□□ -1.41
MSI2-209ENST00000579483 ZCCHC13Q8WW36 166 aaKnown RBP6.21□□□□□ -1.41
MSI2-209ENST00000579483 UBR5O95071 2799 aaPredicted RBP6.21□□□□□ -1.42
MSI2-209ENST00000579483 KMT2BQ9UMN6 2715 aaPredicted RBP6.21□□□□□ -1.42
MSI2-209ENST00000579483 MAP1AP78559 2803 aaPredicted RBP6.19□□□□□ -1.42
MSI2-209ENST00000579483 RPS28P62857 69 aaKnown RBP6.19□□□□□ -1.42
MSI2-209ENST00000579483 SPANXA2-OT1Q8N9U9 137 aa6.19□□□□□ -1.42
MSI2-209ENST00000579483 CSAG1Q6PB30 78 aa6.18□□□□□ -1.42
MSI2-209ENST00000579483 CYP4F30PQ9H0H9 118 aa6.18□□□□□ -1.42
MSI2-209ENST00000579483 KLKP1Q107X0 134 aa6.18□□□□□ -1.42
MSI2-209ENST00000579483 Q8N1X5 172 aa6.17□□□□□ -1.42
MSI2-209ENST00000579483 LINC00483Q53H64 154 aa6.16□□□□□ -1.42
MSI2-209ENST00000579483 LAMA3Q16787 3333 aa6.14□□□□□ -1.43
MSI2-209ENST00000579483 LINC01554Q52M75 96 aa6.13□□□□□ -1.43
MSI2-209ENST00000579483 HRES1P13985 223 aa6.13□□□□□ -1.43
MSI2-209ENST00000579483 HIVEP1P15822 2718 aa6.13□□□□□ -1.43
MSI2-209ENST00000579483 Q6ZRN7 208 aaPredicted RBP6.12□□□□□ -1.43
MSI2-209ENST00000579483 STAB2Q8WWQ8 2551 aa6.12□□□□□ -1.43
MSI2-209ENST00000579483 FLNCQ14315 2725 aa6.12□□□□□ -1.43
MSI2-209ENST00000579483 RPS29P62273 56 aaKnown RBP6.11□□□□□ -1.43
MSI2-209ENST00000579483 CRIPTQ9P021 101 aa6.11□□□□□ -1.43
MSI2-209ENST00000579483 PCNTO95613 3336 aa6.1□□□□□ -1.43
MSI2-209ENST00000579483 MIR22HGQ0VDD5 57 aa6.1□□□□□ -1.43
MSI2-209ENST00000579483 ITPR1Q14643 2758 aa6.09□□□□□ -1.43
MSI2-209ENST00000579483 WDFY4Q6ZS81 3184 aa6.09□□□□□ -1.43
MSI2-209ENST00000579483 MMP24-AS1A0A0U1RRL7 71 aa6.09□□□□□ -1.43
MSI2-209ENST00000579483 Q8NDZ9 215 aa6.09□□□□□ -1.43
MSI2-209ENST00000579483 S4R3F8 94 aa6.09□□□□□ -1.43
MSI2-209ENST00000579483 SPINK7P58062 85 aa6.09□□□□□ -1.44
MSI2-209ENST00000579483 LINC00472Q9H8W2 130 aa6.09□□□□□ -1.44
MSI2-209ENST00000579483 C4orf26Q17RF5 130 aa6.08□□□□□ -1.44
MSI2-209ENST00000579483 CAMK2N1Q7Z7J9 78 aa6.07□□□□□ -1.44
MSI2-209ENST00000579483 PRUNE2Q8WUY3 3088 aa6.07□□□□□ -1.44
MSI2-209ENST00000579483 SPINT4Q6UDR6 99 aa6.06□□□□□ -1.44
MSI2-209ENST00000579483 MKI67P46013 3256 aaKnown RBP6.06□□□□□ -1.44
MSI2-209ENST00000579483 TENM4Q6N022 2769 aa6.05□□□□□ -1.44
MSI2-209ENST00000579483 A0A0C4DFX4 3053 aa6.05□□□□□ -1.44
MSI2-209ENST00000579483 PANO1I0J062 215 aa6.05□□□□□ -1.44
MSI2-209ENST00000579483 OCR1Q9BZK8 76 aa6.04□□□□□ -1.44
MSI2-209ENST00000579483 KRTAP4-16G5E9R7 235 aaPredicted RBP6.02□□□□□ -1.45
MSI2-209ENST00000579483 PRO0628Q9UI54 55 aa6.02□□□□□ -1.45
MSI2-209ENST00000579483 H7BZZ5 65 aa6□□□□□ -1.45
MSI2-209ENST00000579483 Q5W150 140 aa6□□□□□ -1.45
MSI2-209ENST00000579483 CDC42SE1Q9NRR8 79 aa6□□□□□ -1.45
MSI2-209ENST00000579483 A0A0D9SG42 100 aa6□□□□□ -1.45
MSI2-209ENST00000579483 ASB16-AS1Q495Z4 193 aa5.99□□□□□ -1.45
MSI2-209ENST00000579483 DMBT1Q9UGM3 2413 aaPredicted RBP5.99□□□□□ -1.45
MSI2-209ENST00000579483 A0A087X002 238 aa5.98□□□□□ -1.45
MSI2-209ENST00000579483 A0A1B0GU33 70 aa5.97□□□□□ -1.45
MSI2-209ENST00000579483 TRIOO75962 3097 aa5.97□□□□□ -1.45
MSI2-209ENST00000579483 R4GN34 69 aa5.97□□□□□ -1.45
MSI2-209ENST00000579483 Q8N9P0 234 aaPredicted RBP5.95□□□□□ -1.46
MSI2-209ENST00000579483 APCP25054 2843 aa5.94□□□□□ -1.46
MSI2-209ENST00000579483 FRYQ5TBA9 3013 aa5.94□□□□□ -1.46
MSI2-209ENST00000579483 FLG2Q5D862 2391 aaPredicted RBP5.94□□□□□ -1.46
MSI2-209ENST00000579483 NBEAL2Q6ZNJ1 2754 aa5.94□□□□□ -1.46
MSI2-209ENST00000579483 Q5XG85 94 aa5.93□□□□□ -1.46
MSI2-209ENST00000579483 DMAC1Q96GE9 116 aa5.93□□□□□ -1.46
MSI2-209ENST00000579483 CFAP54Q96N23 3096 aa5.92□□□□□ -1.46
MSI2-209ENST00000579483 UTP20O75691 2785 aaKnown RBP5.92□□□□□ -1.46
MSI2-209ENST00000579483 BRCA2P51587 3418 aa5.9□□□□□ -1.46
MSI2-209ENST00000579483 TNRC18O15417 2968 aaPredicted RBP5.89□□□□□ -1.47
MSI2-209ENST00000579483 NIPBLQ6KC79 2804 aaeCLIP5.89□□□□□ -1.47
MSI2-209ENST00000579483 Q75L30 129 aa5.88□□□□□ -1.47
MSI2-209ENST00000579483 COL12A1Q99715 3063 aa5.87□□□□□ -1.47
MSI2-209ENST00000579483 FRYLO94915 3013 aa5.87□□□□□ -1.47
MSI2-209ENST00000579483 ATMQ13315 3056 aa5.86□□□□□ -1.47
MSI2-209ENST00000579483 PLAC4Q8WY50 150 aa5.86□□□□□ -1.47
MSI2-209ENST00000579483 KRTAP13-1Q8IUC0 172 aa5.85□□□□□ -1.47
MSI2-209ENST00000579483 TACC2O95359 2948 aa5.85□□□□□ -1.47
MSI2-209ENST00000579483 REV3LO60673 3130 aa5.84□□□□□ -1.47
MSI2-209ENST00000579483 H1FX-AS1Q4G0G2 97 aa5.84□□□□□ -1.48
MSI2-209ENST00000579483 RPL37P61927 97 aaKnown RBP5.83□□□□□ -1.48
MSI2-209ENST00000579483 KRTAP13-2Q52LG2 175 aa5.83□□□□□ -1.48
MSI2-209ENST00000579483 LCA10Q71F78 164 aa5.82□□□□□ -1.48
MSI2-209ENST00000579483 Q1T7F1 81 aa5.82□□□□□ -1.48
MSI2-209ENST00000579483 KRTAP11-1Q8IUC1 163 aa5.82□□□□□ -1.48
MSI2-209ENST00000579483 VPS13AQ96RL7 3174 aa5.81□□□□□ -1.48
MSI2-209ENST00000579483 M0QZ58 72 aa5.81□□□□□ -1.48
MSI2-209ENST00000579483 LINC01558Q9Y6Z2 57 aa5.8□□□□□ -1.48
MSI2-209ENST00000579483 LAMA2P24043 3122 aaKnown RBP5.79□□□□□ -1.48
MSI2-209ENST00000579483 KRTAP7-1Q8IUC3 87 aa5.79□□□□□ -1.48
MSI2-209ENST00000579483 DMXL2Q8TDJ6 3036 aa5.78□□□□□ -1.48
MSI2-209ENST00000579483 EYSQ5T1H1 3165 aa5.78□□□□□ -1.48
MSI2-209ENST00000579483 LRBAP50851 2863 aa5.76□□□□□ -1.49
MSI2-209ENST00000579483 KRTAP29-1A8MX34 341 aaPredicted RBP5.76□□□□□ -1.49
MSI2-209ENST00000579483 XIRP2A4UGR9 3374 aa5.76□□□□□ -1.49
MSI2-209ENST00000579483 NBEAQ8NFP9 2946 aa5.73□□□□□ -1.49
MSI2-209ENST00000579483 UNC80Q8N2C7 3258 aa5.73□□□□□ -1.49
MSI2-209ENST00000579483 LUZP6Q538Z0 58 aa5.73□□□□□ -1.49
MSI2-209ENST00000579483 ADM2Q7Z4H4 148 aa5.73□□□□□ -1.49
MSI2-209ENST00000579483 C20orf166-AS1Q96NR2 134 aa5.72□□□□□ -1.49
MSI2-209ENST00000579483 CRYBG3Q68DQ2 2970 aa5.7□□□□□ -1.5
MSI2-209ENST00000579483 NOTCH2NLQ7Z3S9 236 aa5.69□□□□□ -1.5
MSI2-209ENST00000579483 ZZEF1O43149 2961 aa5.69□□□□□ -1.5
MSI2-209ENST00000579483 CDH23Q9H251 3354 aa5.68□□□□□ -1.5
MSI2-209ENST00000579483 KALRNO60229 2985 aa5.68□□□□□ -1.5
MSI2-209ENST00000579483 TPRXLQ17RH7 258 aa5.67□□□□□ -1.5
MSI2-209ENST00000579483 A8MUU9 505 aa5.67□□□□□ -1.5
MSI2-209ENST00000579483 LAMA1P25391 3075 aa5.65□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms