RNA–Protein interactions for RNA: ENST00000578698.1

PTPRM-209, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 3

Gene PTPRM, Length 486 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-209ENST00000578698 CELSR3Q9NYQ7 3312 aa1.35□□□□□ -2.19
PTPRM-209ENST00000578698 DDX60Q8IY21 1712 aaKnown RBP1.35□□□□□ -2.19
PTPRM-209ENST00000578698 DMXL2Q8TDJ6 3036 aa1.34□□□□□ -2.19
PTPRM-209ENST00000578698 RELNP78509 3460 aa1.34□□□□□ -2.19
PTPRM-209ENST00000578698 FLNCQ14315 2725 aa1.34□□□□□ -2.19
PTPRM-209ENST00000578698 LAMA5O15230 3695 aa1.34□□□□□ -2.19
PTPRM-209ENST00000578698 CHD7Q9P2D1 2997 aa1.34□□□□□ -2.19
PTPRM-209ENST00000578698 H0YGX0 51 aa1.34□□□□□ -2.19
PTPRM-209ENST00000578698 PIN1P1O15428 100 aa1.34□□□□□ -2.19
PTPRM-209ENST00000578698 PRB1P04280 392 aa1.34□□□□□ -2.19
PTPRM-209ENST00000578698 COX17Q14061 63 aa1.34□□□□□ -2.19
PTPRM-209ENST00000578698 CCL19Q99731 98 aa1.34□□□□□ -2.19
PTPRM-209ENST00000578698 NBEAQ8NFP9 2946 aa1.34□□□□□ -2.2
PTPRM-209ENST00000578698 CACNA1EQ15878 2313 aa1.34□□□□□ -2.2
PTPRM-209ENST00000578698 COL12A1Q99715 3063 aa1.34□□□□□ -2.2
PTPRM-209ENST00000578698 DOPEY2Q9Y3R5 2298 aa1.33□□□□□ -2.2
PTPRM-209ENST00000578698 CHD9Q3L8U1 2897 aa1.33□□□□□ -2.2
PTPRM-209ENST00000578698 M0R3E3 92 aa1.33□□□□□ -2.2
PTPRM-209ENST00000578698 NCR3O14931 201 aa1.33□□□□□ -2.2
PTPRM-209ENST00000578698 LYNX1P0DP58 116 aa1.33□□□□□ -2.2
PTPRM-209ENST00000578698 FDCSPQ8NFU4 85 aa1.33□□□□□ -2.2
PTPRM-209ENST00000578698 Q96NJ1 140 aa1.33□□□□□ -2.2
PTPRM-209ENST00000578698 Q9Y3F1 56 aa1.33□□□□□ -2.2
PTPRM-209ENST00000578698 NBEAL1Q6ZS30 2694 aa1.33□□□□□ -2.2
PTPRM-209ENST00000578698 TENM4Q6N022 2769 aa1.33□□□□□ -2.2
PTPRM-209ENST00000578698 F8P00451 2351 aa1.32□□□□□ -2.2
PTPRM-209ENST00000578698 SPTBN1Q01082 2364 aaKnown RBP1.32□□□□□ -2.2
PTPRM-209ENST00000578698 Q6ZQY7 126 aa1.32□□□□□ -2.2
PTPRM-209ENST00000578698 TMEM167BQ9NRX6 74 aa1.32□□□□□ -2.2
PTPRM-209ENST00000578698 STAB1Q9NY15 2570 aa1.32□□□□□ -2.2
PTPRM-209ENST00000578698 LRRC37AA6NMS7 1700 aa1.32□□□□□ -2.2
PTPRM-209ENST00000578698 RP1L1Q8IWN7 2480 aaPredicted RBP1.31□□□□□ -2.2
PTPRM-209ENST00000578698 JMJD1CQ15652 2540 aa1.31□□□□□ -2.2
PTPRM-209ENST00000578698 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.31□□□□□ -2.2
PTPRM-209ENST00000578698 M0R1W7 72 aa1.31□□□□□ -2.2
PTPRM-209ENST00000578698 GAFA1Q96PS6 74 aa1.31□□□□□ -2.2
PTPRM-209ENST00000578698 CNFNQ9BYD5 112 aa1.31□□□□□ -2.2
PTPRM-209ENST00000578698 WDFY3Q8IZQ1 3526 aa1.31□□□□□ -2.2
PTPRM-209ENST00000578698 CCDC168Q8NDH2 2452 aa1.31□□□□□ -2.2
PTPRM-209ENST00000578698 ANKHD1Q8IWZ3 2542 aaKnown RBP1.31□□□□□ -2.2
PTPRM-209ENST00000578698 NBPF19A0A087WUL8 3843 aa1.31□□□□□ -2.2
PTPRM-209ENST00000578698 USP9YO00507 2555 aaPredicted RBP1.3□□□□□ -2.2
PTPRM-209ENST00000578698 TRGV1A0A0A0MS02 117 aa1.3□□□□□ -2.2
PTPRM-209ENST00000578698 ETDCA0A1B0GVM5 59 aa1.3□□□□□ -2.2
PTPRM-209ENST00000578698 NDUFA4O00483 81 aa1.3□□□□□ -2.2
PTPRM-209ENST00000578698 FXYD6P3P58550 94 aa1.3□□□□□ -2.2
PTPRM-209ENST00000578698 KRTAP12-4P60329 112 aa1.3□□□□□ -2.2
PTPRM-209ENST00000578698 CRCT1Q9UGL9 99 aa1.3□□□□□ -2.2
PTPRM-209ENST00000578698 APC2O95996 2303 aa1.3□□□□□ -2.2
PTPRM-209ENST00000578698 CPSF4LA6NMK7 179 aaKnown RBP1.29□□□□□ -2.2
PTPRM-209ENST00000578698 ARL14EPLP0DKL9 152 aa1.29□□□□□ -2.2
PTPRM-209ENST00000578698 C10orf99Q6UWK7 81 aa1.29□□□□□ -2.2
PTPRM-209ENST00000578698 DEFB124Q8NES8 71 aa1.29□□□□□ -2.2
PTPRM-209ENST00000578698 WFDC9Q8NEX5 89 aa1.29□□□□□ -2.2
PTPRM-209ENST00000578698 CSPG4Q6UVK1 2322 aa1.29□□□□□ -2.2
PTPRM-209ENST00000578698 ITPR2Q14571 2701 aa1.29□□□□□ -2.2
PTPRM-209ENST00000578698 NF1P21359 2839 aa1.29□□□□□ -2.2
PTPRM-209ENST00000578698 KNTC1P50748 2209 aa1.28□□□□□ -2.2
PTPRM-209ENST00000578698 HIVEP3Q5T1R4 2406 aa1.28□□□□□ -2.2
PTPRM-209ENST00000578698 NIPBLQ6KC79 2804 aaeCLIP1.28□□□□□ -2.2
PTPRM-209ENST00000578698 DNHD1Q96M86 4753 aa1.28□□□□□ -2.2
PTPRM-209ENST00000578698 DEFB131BA0A096LNP1 70 aa1.28□□□□□ -2.2
PTPRM-209ENST00000578698 A0A096LNT2 108 aa1.28□□□□□ -2.2
PTPRM-209ENST00000578698 SPINK4O60575 86 aa1.28□□□□□ -2.2
PTPRM-209ENST00000578698 COX7BP24311 80 aa1.28□□□□□ -2.2
PTPRM-209ENST00000578698 DEFB112Q30KQ8 113 aa1.28□□□□□ -2.2
PTPRM-209ENST00000578698 F5P12259 2224 aa1.28□□□□□ -2.2
PTPRM-209ENST00000578698 GOLGA4Q13439 2230 aaKnown RBP1.27□□□□□ -2.21
PTPRM-209ENST00000578698 LY6G6CO95867 125 aa1.27□□□□□ -2.21
PTPRM-209ENST00000578698 Q6ZSA8 131 aa1.27□□□□□ -2.21
PTPRM-209ENST00000578698 DEFB119Q8N690 84 aa1.27□□□□□ -2.21
PTPRM-209ENST00000578698 PKD1L1Q8TDX9 2849 aa1.27□□□□□ -2.21
PTPRM-209ENST00000578698 TLN2Q9Y4G6 2542 aa1.27□□□□□ -2.21
PTPRM-209ENST00000578698 ROS1P08922 2347 aa1.27□□□□□ -2.21
PTPRM-209ENST00000578698 CSMD1Q96PZ7 3565 aa1.27□□□□□ -2.21
PTPRM-209ENST00000578698 CACNA1CQ13936 2221 aa1.26□□□□□ -2.21
PTPRM-209ENST00000578698 MRPL33O75394 65 aaKnown RBP1.26□□□□□ -2.21
PTPRM-209ENST00000578698 NDUFA3O95167 84 aa1.26□□□□□ -2.21
PTPRM-209ENST00000578698 ADGRG4Q8IZF6 3080 aa1.26□□□□□ -2.21
PTPRM-209ENST00000578698 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP1.26□□□□□ -2.21
PTPRM-209ENST00000578698 CNTRLQ7Z7A1 2325 aa1.26□□□□□ -2.21
PTPRM-209ENST00000578698 HIVEP1P15822 2718 aa1.25□□□□□ -2.21
PTPRM-209ENST00000578698 CENPEQ02224 2701 aa1.25□□□□□ -2.21
PTPRM-209ENST00000578698 COL6A5A8TX70 2615 aa1.25□□□□□ -2.21
PTPRM-209ENST00000578698 ATMQ13315 3056 aa1.25□□□□□ -2.21
PTPRM-209ENST00000578698 BOD1L1Q8NFC6 3051 aa1.25□□□□□ -2.21
PTPRM-209ENST00000578698 OTOGQ6ZRI0 2925 aa1.25□□□□□ -2.21
PTPRM-209ENST00000578698 PLXNB2O15031 1838 aa1.25□□□□□ -2.21
PTPRM-209ENST00000578698 A0A1B0GU69 56 aa1.25□□□□□ -2.21
PTPRM-209ENST00000578698 HAMPP81172 84 aa1.25□□□□□ -2.21
PTPRM-209ENST00000578698 LINC00575Q6W349 94 aa1.25□□□□□ -2.21
PTPRM-209ENST00000578698 PLAC4Q8WY50 150 aa1.25□□□□□ -2.21
PTPRM-209ENST00000578698 SMIM2Q9BVW6 85 aa1.25□□□□□ -2.21
PTPRM-209ENST00000578698 KRTAP4-1Q9BYQ7 146 aa1.25□□□□□ -2.21
PTPRM-209ENST00000578698 FLNAP21333 2647 aaKnown RBP1.25□□□□□ -2.21
PTPRM-209ENST00000578698 LRBAP50851 2863 aa1.25□□□□□ -2.21
PTPRM-209ENST00000578698 CRIP1P50238 77 aa1.24□□□□□ -2.21
PTPRM-209ENST00000578698 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa1.24□□□□□ -2.21
PTPRM-209ENST00000578698 LAMA1P25391 3075 aa1.24□□□□□ -2.21
PTPRM-209ENST00000578698 SPENQ96T58 3664 aaKnown RBP1.24□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms