RNA–Protein interactions for RNA: ENST00000578595.1

SS18-209, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 3

Gene SS18, Length 406 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-209ENST00000578595 FXYD2P54710 66 aa11.01□□□□□ -0.65
SS18-209ENST00000578595 SNCGO76070 127 aa10.99□□□□□ -0.65
SS18-209ENST00000578595 HSD52Q0P140 79 aa10.99□□□□□ -0.65
SS18-209ENST00000578595 PRO1854Q9UHT4 67 aa10.99□□□□□ -0.65
SS18-209ENST00000578595 A0A0G2JQZ4 141 aa10.98□□□□□ -0.65
SS18-209ENST00000578595 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.98□□□□□ -0.65
SS18-209ENST00000578595 UQCR10Q9UDW1 63 aa10.98□□□□□ -0.65
SS18-209ENST00000578595 H0YGX0 51 aa10.95□□□□□ -0.66
SS18-209ENST00000578595 CD164Q04900 197 aa10.94□□□□□ -0.66
SS18-209ENST00000578595 SNHG12Q9BXW3 62 aa10.94□□□□□ -0.66
SS18-209ENST00000578595 K7ERJ3 54 aa10.92□□□□□ -0.66
SS18-209ENST00000578595 KRTAP13-3Q3SY46 172 aa10.92□□□□□ -0.66
SS18-209ENST00000578595 PSMB2P49721 201 aa10.91□□□□□ -0.66
SS18-209ENST00000578595 PPDPFLQ8WWR9 84 aa10.9□□□□□ -0.66
SS18-209ENST00000578595 FAM218AQ96MZ4 157 aa10.9□□□□□ -0.66
SS18-209ENST00000578595 TRIAP1O43715 76 aa10.88□□□□□ -0.67
SS18-209ENST00000578595 Q6JHZ5 121 aa10.88□□□□□ -0.67
SS18-209ENST00000578595 OCIAD2Q56VL3 154 aa10.87□□□□□ -0.67
SS18-209ENST00000578595 CLEC2BQ92478 149 aa10.86□□□□□ -0.67
SS18-209ENST00000578595 H3BUT2 72 aa10.85□□□□□ -0.67
SS18-209ENST00000578595 IGFL1Q6UW32 110 aa10.85□□□□□ -0.67
SS18-209ENST00000578595 TCL1BO95988 128 aa10.84□□□□□ -0.67
SS18-209ENST00000578595 DNAL4O96015 105 aa10.83□□□□□ -0.68
SS18-209ENST00000578595 COX6CP09669 75 aa10.83□□□□□ -0.68
SS18-209ENST00000578595 FABP2P12104 132 aa10.83□□□□□ -0.68
SS18-209ENST00000578595 A0A1B0GX51 115 aa10.82□□□□□ -0.68
SS18-209ENST00000578595 GHRHP01286 108 aa10.82□□□□□ -0.68
SS18-209ENST00000578595 IGLV8-61A0A075B6I0 122 aa10.81□□□□□ -0.68
SS18-209ENST00000578595 C9orf92A6NGG3 77 aa10.8□□□□□ -0.68
SS18-209ENST00000578595 Q5XG85 94 aa10.8□□□□□ -0.68
SS18-209ENST00000578595 SMIM6P0DI80 62 aa10.79□□□□□ -0.68
SS18-209ENST00000578595 NDUFV3P56181 108 aaKnown RBP10.79□□□□□ -0.68
SS18-209ENST00000578595 C1orf195Q5TG92 126 aa10.78□□□□□ -0.68
SS18-209ENST00000578595 TRBV7-7A0A0K0K1E9 115 aa10.77□□□□□ -0.69
SS18-209ENST00000578595 A0A0U1RQV1 116 aa10.77□□□□□ -0.69
SS18-209ENST00000578595 SCGB1C2P0DMR2 95 aa10.76□□□□□ -0.69
SS18-209ENST00000578595 SEC61BP60468 96 aaKnown RBP10.75□□□□□ -0.69
SS18-209ENST00000578595 XP32Q5T750 250 aa10.75□□□□□ -0.69
SS18-209ENST00000578595 ORMDL1Q9P0S3 153 aa10.75□□□□□ -0.69
SS18-209ENST00000578595 H3BMG7 143 aa10.74□□□□□ -0.69
SS18-209ENST00000578595 M0R143 59 aa10.74□□□□□ -0.69
SS18-209ENST00000578595 MUC17Q685J3 4493 aa10.73□□□□□ -0.69
SS18-209ENST00000578595 A0A1B0GV72 72 aa10.73□□□□□ -0.69
SS18-209ENST00000578595 ASB16-AS1Q495Z4 193 aa10.71□□□□□ -0.69
SS18-209ENST00000578595 MUC2Q02817 5179 aa10.71□□□□□ -0.7
SS18-209ENST00000578595 TSTD3H0UI37 97 aa10.68□□□□□ -0.7
SS18-209ENST00000578595 H3BQ85 93 aa10.67□□□□□ -0.7
SS18-209ENST00000578595 TEN1Q86WV5 123 aa10.67□□□□□ -0.7
SS18-209ENST00000578595 SS18L2Q9UHA2 77 aa10.67□□□□□ -0.7
SS18-209ENST00000578595 LST1O00453 97 aa10.66□□□□□ -0.7
SS18-209ENST00000578595 TMEM256-PLSCR3K7ERE1 68 aa10.65□□□□□ -0.7
SS18-209ENST00000578595 A0A087WSZ3 146 aa10.63□□□□□ -0.71
SS18-209ENST00000578595 TRACP01848 142 aa10.63□□□□□ -0.71
SS18-209ENST00000578595 BATFQ16520 125 aa10.63□□□□□ -0.71
SS18-209ENST00000578595 NAA38Q9BRA0 125 aaKnown RBP10.63□□□□□ -0.71
SS18-209ENST00000578595 Q6Q795 121 aa10.62□□□□□ -0.71
SS18-209ENST00000578595 ANKRD29Q8N6D5 301 aa10.62□□□□□ -0.71
SS18-209ENST00000578595 LOC105371267A0A1B0GV96 52 aa10.61□□□□□ -0.71
SS18-209ENST00000578595 PCOTHQ58A44 107 aa10.58□□□□□ -0.72
SS18-209ENST00000578595 A0A1W2PNM2 257 aa10.57□□□□□ -0.72
SS18-209ENST00000578595 UBE2V1Q13404 147 aa10.57□□□□□ -0.72
SS18-209ENST00000578595 ATXN8Q156A1 80 aa10.55□□□□□ -0.72
SS18-209ENST00000578595 VPS25Q9BRG1 176 aa10.55□□□□□ -0.72
SS18-209ENST00000578595 KRTAP4-1Q9BYQ7 146 aa10.54□□□□□ -0.72
SS18-209ENST00000578595 CCKP06307 115 aa10.53□□□□□ -0.72
SS18-209ENST00000578595 BAALC-AS2P0C853 105 aa10.53□□□□□ -0.72
SS18-209ENST00000578595 OBSCN-AS1Q96MR7 158 aa10.53□□□□□ -0.72
SS18-209ENST00000578595 SIGMAR1Q99720 223 aa10.53□□□□□ -0.72
SS18-209ENST00000578595 LYRM7Q5U5X0 104 aa10.52□□□□□ -0.73
SS18-209ENST00000578595 RPL37P61927 97 aaKnown RBP10.51□□□□□ -0.73
SS18-209ENST00000578595 TRBV7-4A0A0J9YYF1 115 aa10.5□□□□□ -0.73
SS18-209ENST00000578595 RBM3P98179 157 aaKnown RBP10.5□□□□□ -0.73
SS18-209ENST00000578595 DSCR8Q96T75 97 aa10.5□□□□□ -0.73
SS18-209ENST00000578595 Q96NJ1 140 aa10.46□□□□□ -0.73
SS18-209ENST00000578595 C9JAW5 83 aa10.44□□□□□ -0.74
SS18-209ENST00000578595 IGKV4-1P06312 121 aa10.44□□□□□ -0.74
SS18-209ENST00000578595 FAT4Q6V0I7 4981 aa10.43□□□□□ -0.74
SS18-209ENST00000578595 DEFB116Q30KQ4 102 aa10.41□□□□□ -0.74
SS18-209ENST00000578595 TRBV20-1A0A075B6N2 111 aa10.4□□□□□ -0.74
SS18-209ENST00000578595 DSCR10P59022 87 aa10.4□□□□□ -0.74
SS18-209ENST00000578595 C9orf118A6NHY6 69 aa10.38□□□□□ -0.75
SS18-209ENST00000578595 JMJD7-PLA2G4BH0Y9G9 81 aa10.38□□□□□ -0.75
SS18-209ENST00000578595 ATP11AUNQ6ZP68 121 aa10.38□□□□□ -0.75
SS18-209ENST00000578595 Q75L30 129 aa10.37□□□□□ -0.75
SS18-209ENST00000578595 TAX1BP3O14907 124 aa10.35□□□□□ -0.75
SS18-209ENST00000578595 LCE2AQ5TA79 106 aaPredicted RBP10.35□□□□□ -0.75
SS18-209ENST00000578595 A0A1W2PPM0 123 aa10.33□□□□□ -0.76
SS18-209ENST00000578595 C21orf62-AS1Q17RA5 79 aa10.33□□□□□ -0.76
SS18-209ENST00000578595 LINC00472Q9H8W2 130 aa10.33□□□□□ -0.76
SS18-209ENST00000578595 C14orf132Q9NPU4 83 aa10.33□□□□□ -0.76
SS18-209ENST00000578595 LINC00313P59037 77 aa10.32□□□□□ -0.76
SS18-209ENST00000578595 IGHV6-1A0A0B4J1U7 121 aa10.31□□□□□ -0.76
SS18-209ENST00000578595 Q6ZQT0 140 aa10.31□□□□□ -0.76
SS18-209ENST00000578595 MTURNQ8N3F0 131 aa10.31□□□□□ -0.76
SS18-209ENST00000578595 PDE6GP18545 87 aa10.29□□□□□ -0.76
SS18-209ENST00000578595 LOC110117498A0A087WWA1 95 aa10.28□□□□□ -0.76
SS18-209ENST00000578595 C20orf166-AS1Q96NR2 134 aa10.28□□□□□ -0.76
SS18-209ENST00000578595 A8MUU9 505 aa10.26□□□□□ -0.77
SS18-209ENST00000578595 H3BT86 120 aa10.26□□□□□ -0.77
SS18-209ENST00000578595 COX6B2Q6YFQ2 88 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms