RNA–Protein interactions for RNA: ENST00000578501.5

CSNK1D-208, Transcript of casein kinase 1 delta, human

TSL 2

Gene CSNK1D, Length 1,124 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CSNK1D-208	ENST00000578501	CEND1	Q8N111	149 aa		7.63	□□□□□ -1.19
CSNK1D-208	ENST00000578501	RAB37	Q96AX2	223 aa		7.63	□□□□□ -1.19
CSNK1D-208	ENST00000578501	HRCT1	Q6UXD1	115 aa		7.62	□□□□□ -1.19
CSNK1D-208	ENST00000578501		Q6ZQY7	126 aa		7.62	□□□□□ -1.19
CSNK1D-208	ENST00000578501	TMEM238L	A0A1B0GVL6	79 aa		7.61	□□□□□ -1.19
CSNK1D-208	ENST00000578501		A6NJY4	79 aa		7.61	□□□□□ -1.19
CSNK1D-208	ENST00000578501		H7C2G1	150 aa		7.61	□□□□□ -1.19
CSNK1D-208	ENST00000578501	LCE2D	Q5TA82	110 aa	Predicted RBP	7.61	□□□□□ -1.19
CSNK1D-208	ENST00000578501		Q5XG85	94 aa		7.61	□□□□□ -1.19
CSNK1D-208	ENST00000578501	UNQ6493/PRO21345	Q6UXR8	122 aa	Predicted RBP	7.61	□□□□□ -1.19
CSNK1D-208	ENST00000578501	CRCT1	Q9UGL9	99 aa		7.61	□□□□□ -1.19
CSNK1D-208	ENST00000578501	PPDPFL	Q8WWR9	84 aa		7.6	□□□□□ -1.19
CSNK1D-208	ENST00000578501		F8WEM9	126 aa		7.59	□□□□□ -1.19
CSNK1D-208	ENST00000578501		H0YGX0	51 aa		7.58	□□□□□ -1.2
CSNK1D-208	ENST00000578501	MUC17	Q685J3	4493 aa		7.58	□□□□□ -1.2
CSNK1D-208	ENST00000578501	IGLV8-61	A0A075B6I0	122 aa		7.57	□□□□□ -1.2
CSNK1D-208	ENST00000578501	SNCG	O76070	127 aa		7.57	□□□□□ -1.2
CSNK1D-208	ENST00000578501	PRO1854	Q9UHT4	67 aa		7.57	□□□□□ -1.2
CSNK1D-208	ENST00000578501	FXYD2	P54710	66 aa		7.56	□□□□□ -1.2
CSNK1D-208	ENST00000578501		Q6JHZ5	121 aa		7.56	□□□□□ -1.2
CSNK1D-208	ENST00000578501		A0A0G2JQZ4	141 aa		7.55	□□□□□ -1.2
CSNK1D-208	ENST00000578501	HSD52	Q0P140	79 aa		7.55	□□□□□ -1.2
CSNK1D-208	ENST00000578501	OCIAD2	Q56VL3	154 aa		7.55	□□□□□ -1.2
CSNK1D-208	ENST00000578501	ASB16-AS1	Q495Z4	193 aa		7.54	□□□□□ -1.2
CSNK1D-208	ENST00000578501		A0A1B0GX51	115 aa		7.53	□□□□□ -1.2
CSNK1D-208	ENST00000578501	UQCR10	Q9UDW1	63 aa		7.53	□□□□□ -1.2
CSNK1D-208	ENST00000578501	XP32	Q5T750	250 aa		7.52	□□□□□ -1.21
CSNK1D-208	ENST00000578501	CLEC2B	Q92478	149 aa		7.52	□□□□□ -1.21
CSNK1D-208	ENST00000578501	FAM218A	Q96MZ4	157 aa		7.52	□□□□□ -1.21
CSNK1D-208	ENST00000578501	SNHG12	Q9BXW3	62 aa		7.52	□□□□□ -1.21
CSNK1D-208	ENST00000578501	TCL1B	O95988	128 aa		7.51	□□□□□ -1.21
CSNK1D-208	ENST00000578501	SEC61B	P60468	96 aa	Known RBP	7.51	□□□□□ -1.21
CSNK1D-208	ENST00000578501	C1orf195	Q5TG92	126 aa		7.51	□□□□□ -1.21
CSNK1D-208	ENST00000578501	IGFL1	Q6UW32	110 aa		7.51	□□□□□ -1.21
CSNK1D-208	ENST00000578501	GHRH	P01286	108 aa		7.5	□□□□□ -1.21
CSNK1D-208	ENST00000578501	LOC105371267	A0A1B0GV96	52 aa		7.49	□□□□□ -1.21
CSNK1D-208	ENST00000578501	TRIAP1	O43715	76 aa		7.49	□□□□□ -1.21
CSNK1D-208	ENST00000578501	TRBV7-7	A0A0K0K1E9	115 aa		7.48	□□□□□ -1.21
CSNK1D-208	ENST00000578501	NDUFV3	P56181	108 aa	Known RBP	7.46	□□□□□ -1.22
CSNK1D-208	ENST00000578501		H3BUT2	72 aa		7.45	□□□□□ -1.22
CSNK1D-208	ENST00000578501		K7ERJ3	54 aa		7.45	□□□□□ -1.22
CSNK1D-208	ENST00000578501	COX6C	P09669	75 aa		7.44	□□□□□ -1.22
CSNK1D-208	ENST00000578501	SMIM6	P0DI80	62 aa		7.44	□□□□□ -1.22
CSNK1D-208	ENST00000578501		Q6Q795	121 aa		7.44	□□□□□ -1.22
CSNK1D-208	ENST00000578501	C9orf92	A6NGG3	77 aa		7.43	□□□□□ -1.22
CSNK1D-208	ENST00000578501		H3BQ85	93 aa		7.43	□□□□□ -1.22
CSNK1D-208	ENST00000578501	PSMB2	P49721	201 aa		7.43	□□□□□ -1.22
CSNK1D-208	ENST00000578501	DNAL4	O96015	105 aa		7.41	□□□□□ -1.22
CSNK1D-208	ENST00000578501	FABP2	P12104	132 aa		7.41	□□□□□ -1.22
CSNK1D-208	ENST00000578501	TEN1	Q86WV5	123 aa		7.41	□□□□□ -1.22
CSNK1D-208	ENST00000578501		H3BMG7	143 aa		7.4	□□□□□ -1.22
CSNK1D-208	ENST00000578501	KRTAP4-1	Q9BYQ7	146 aa		7.39	□□□□□ -1.23
CSNK1D-208	ENST00000578501	ORMDL1	Q9P0S3	153 aa		7.39	□□□□□ -1.23
CSNK1D-208	ENST00000578501	TMEM256-PLSCR3	K7ERE1	68 aa		7.38	□□□□□ -1.23
CSNK1D-208	ENST00000578501	SS18L2	Q9UHA2	77 aa		7.38	□□□□□ -1.23
CSNK1D-208	ENST00000578501	LST1	O00453	97 aa		7.37	□□□□□ -1.23
CSNK1D-208	ENST00000578501	TRAC	P01848	142 aa		7.36	□□□□□ -1.23
CSNK1D-208	ENST00000578501	FSIP2	Q5CZC0	6907 aa		7.36	□□□□□ -1.23
CSNK1D-208	ENST00000578501	PCOTH	Q58A44	107 aa		7.35	□□□□□ -1.23
CSNK1D-208	ENST00000578501		M0R143	59 aa		7.34	□□□□□ -1.23
CSNK1D-208	ENST00000578501	SCGB1C2	P0DMR2	95 aa		7.34	□□□□□ -1.23
CSNK1D-208	ENST00000578501	TSTD3	H0UI37	97 aa		7.33	□□□□□ -1.24
CSNK1D-208	ENST00000578501	RPL37	P61927	97 aa	Known RBP	7.33	□□□□□ -1.24
CSNK1D-208	ENST00000578501	UBE2V1	Q13404	147 aa		7.33	□□□□□ -1.24
CSNK1D-208	ENST00000578501		A0A087WSZ3	146 aa		7.32	□□□□□ -1.24
CSNK1D-208	ENST00000578501		A0A1W2PNM2	257 aa		7.32	□□□□□ -1.24
CSNK1D-208	ENST00000578501	ANKRD29	Q8N6D5	301 aa		7.32	□□□□□ -1.24
CSNK1D-208	ENST00000578501	TRBV7-4	A0A0J9YYF1	115 aa		7.31	□□□□□ -1.24
CSNK1D-208	ENST00000578501	OBSCN-AS1	Q96MR7	158 aa		7.28	□□□□□ -1.24
CSNK1D-208	ENST00000578501		Q96NJ1	140 aa		7.28	□□□□□ -1.24
CSNK1D-208	ENST00000578501		Q75L30	129 aa		7.26	□□□□□ -1.25
CSNK1D-208	ENST00000578501		A0A1B0GV72	72 aa		7.25	□□□□□ -1.25
CSNK1D-208	ENST00000578501	CCK	P06307	115 aa		7.25	□□□□□ -1.25
CSNK1D-208	ENST00000578501	BAALC-AS2	P0C853	105 aa		7.25	□□□□□ -1.25
CSNK1D-208	ENST00000578501	RBM3	P98179	157 aa	Known RBP	7.24	□□□□□ -1.25
CSNK1D-208	ENST00000578501	ATXN8	Q156A1	80 aa		7.24	□□□□□ -1.25
CSNK1D-208	ENST00000578501	DSCR8	Q96T75	97 aa		7.23	□□□□□ -1.25
CSNK1D-208	ENST00000578501	KRTAP19-2	Q3LHN2	52 aa		7.22	□□□□□ -1.25
CSNK1D-208	ENST00000578501	LCE2C	Q5TA81	110 aa		7.21	□□□□□ -1.26
CSNK1D-208	ENST00000578501	ATP11AUN	Q6ZP68	121 aa		7.21	□□□□□ -1.26
CSNK1D-208	ENST00000578501	C20orf166-AS1	Q96NR2	134 aa		7.21	□□□□□ -1.26
CSNK1D-208	ENST00000578501	NAA38	Q9BRA0	125 aa	Known RBP	7.21	□□□□□ -1.26
CSNK1D-208	ENST00000578501	LYRM7	Q5U5X0	104 aa		7.2	□□□□□ -1.26
CSNK1D-208	ENST00000578501	LINC00472	Q9H8W2	130 aa		7.2	□□□□□ -1.26
CSNK1D-208	ENST00000578501	IGKV4-1	P06312	121 aa		7.19	□□□□□ -1.26
CSNK1D-208	ENST00000578501	SIGMAR1	Q99720	223 aa		7.19	□□□□□ -1.26
CSNK1D-208	ENST00000578501	TRBV20-1	A0A075B6N2	111 aa		7.18	□□□□□ -1.26
CSNK1D-208	ENST00000578501		A8MUU9	505 aa		7.18	□□□□□ -1.26
CSNK1D-208	ENST00000578501		C9JAW5	83 aa		7.18	□□□□□ -1.26
CSNK1D-208	ENST00000578501	C21orf62-AS1	Q17RA5	79 aa		7.18	□□□□□ -1.26
CSNK1D-208	ENST00000578501	KRTAP9-7	A8MTY7	169 aa		7.17	□□□□□ -1.26
CSNK1D-208	ENST00000578501	JMJD7-PLA2G4B	H0Y9G9	81 aa		7.17	□□□□□ -1.26
CSNK1D-208	ENST00000578501	BATF	Q16520	125 aa		7.16	□□□□□ -1.26
CSNK1D-208	ENST00000578501	VPS25	Q9BRG1	176 aa		7.16	□□□□□ -1.26
CSNK1D-208	ENST00000578501	DSCR10	P59022	87 aa		7.15	□□□□□ -1.26
CSNK1D-208	ENST00000578501	LINC00313	P59037	77 aa		7.15	□□□□□ -1.26
CSNK1D-208	ENST00000578501	LOC110117498	A0A087WWA1	95 aa		7.14	□□□□□ -1.27
CSNK1D-208	ENST00000578501		A0A1B0GW54	56 aa		7.14	□□□□□ -1.27
CSNK1D-208	ENST00000578501	MT1H	P80294	61 aa		7.14	□□□□□ -1.27
CSNK1D-208	ENST00000578501	C9orf118	A6NHY6	69 aa		7.13	□□□□□ -1.27

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