RNA–Protein interactions for RNA: ENST00000578317.5

COPS3-215, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 1,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-215ENST00000578317 LYRM7Q5U5X0 104 aa4.88□□□□□ -1.63
COPS3-215ENST00000578317 TRBV20-1A0A075B6N2 111 aa4.87□□□□□ -1.63
COPS3-215ENST00000578317 SNCGO76070 127 aa4.87□□□□□ -1.63
COPS3-215ENST00000578317 UBE2AP49459 152 aa4.87□□□□□ -1.63
COPS3-215ENST00000578317 Q9BRP9 147 aa4.87□□□□□ -1.63
COPS3-215ENST00000578317 SLC25A20O43772 301 aa4.86□□□□□ -1.63
COPS3-215ENST00000578317 FABP2P12104 132 aa4.86□□□□□ -1.63
COPS3-215ENST00000578317 PRLHP81277 87 aa4.86□□□□□ -1.63
COPS3-215ENST00000578317 SMCR5Q8TEV8 140 aa4.86□□□□□ -1.63
COPS3-215ENST00000578317 NAA38Q9BRA0 125 aaKnown RBP4.86□□□□□ -1.63
COPS3-215ENST00000578317 hADV29S1A0JD25 119 aa4.86□□□□□ -1.63
COPS3-215ENST00000578317 LST1O00453 97 aa4.86□□□□□ -1.63
COPS3-215ENST00000578317 IGKV2-30P06310 120 aa4.86□□□□□ -1.63
COPS3-215ENST00000578317 FAM218AQ96MZ4 157 aa4.86□□□□□ -1.63
COPS3-215ENST00000578317 TRACP01848 142 aa4.85□□□□□ -1.63
COPS3-215ENST00000578317 SPINK6Q6UWN8 80 aa4.85□□□□□ -1.63
COPS3-215ENST00000578317 ERC2-IT1O76042 136 aa4.84□□□□□ -1.63
COPS3-215ENST00000578317 TCL1BO95988 128 aa4.84□□□□□ -1.63
COPS3-215ENST00000578317 ATXN8Q156A1 80 aa4.84□□□□□ -1.63
COPS3-215ENST00000578317 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.84□□□□□ -1.63
COPS3-215ENST00000578317 CLEC2BQ92478 149 aa4.84□□□□□ -1.63
COPS3-215ENST00000578317 HIGD2AQ9BW72 106 aa4.84□□□□□ -1.63
COPS3-215ENST00000578317 PKHD1L1Q86WI1 4243 aa4.84□□□□□ -1.63
COPS3-215ENST00000578317 OCIAD2Q56VL3 154 aa4.83□□□□□ -1.64
COPS3-215ENST00000578317 IGLV5-48A0A075B6I7 105 aa4.83□□□□□ -1.64
COPS3-215ENST00000578317 H3BQ85 93 aa4.83□□□□□ -1.64
COPS3-215ENST00000578317 Q5VSD8 79 aa4.83□□□□□ -1.64
COPS3-215ENST00000578317 Q6ZQY7 126 aa4.82□□□□□ -1.64
COPS3-215ENST00000578317 PPDPFLQ8WWR9 84 aa4.82□□□□□ -1.64
COPS3-215ENST00000578317 ZNF706Q9Y5V0 76 aaPredicted RBP4.82□□□□□ -1.64
COPS3-215ENST00000578317 SPCS1Q9Y6A9 102 aa4.82□□□□□ -1.64
COPS3-215ENST00000578317 DNAL4O96015 105 aa4.81□□□□□ -1.64
COPS3-215ENST00000578317 SPRR1BP22528 89 aa4.81□□□□□ -1.64
COPS3-215ENST00000578317 LINC01547P58512 204 aaPredicted RBP4.81□□□□□ -1.64
COPS3-215ENST00000578317 ABCA13Q86UQ4 5058 aa4.81□□□□□ -1.64
COPS3-215ENST00000578317 TEX49A0A1B0GTD5 131 aa4.8□□□□□ -1.64
COPS3-215ENST00000578317 H3BMG7 143 aa4.8□□□□□ -1.64
COPS3-215ENST00000578317 K7EP34 96 aa4.8□□□□□ -1.64
COPS3-215ENST00000578317 LINC00483Q53H64 154 aa4.8□□□□□ -1.64
COPS3-215ENST00000578317 GTF2H5Q6ZYL4 71 aa4.8□□□□□ -1.64
COPS3-215ENST00000578317 ST20-AS1Q8NBB2 130 aa4.8□□□□□ -1.64
COPS3-215ENST00000578317 SPRR4Q96PI1 79 aa4.8□□□□□ -1.64
COPS3-215ENST00000578317 TMEM256-PLSCR3K7ERE1 68 aa4.79□□□□□ -1.64
COPS3-215ENST00000578317 Q8N377 158 aa4.79□□□□□ -1.64
COPS3-215ENST00000578317 FAT3Q8TDW7 4589 aa4.79□□□□□ -1.64
COPS3-215ENST00000578317 LINC01600Q96MT4 127 aa4.79□□□□□ -1.64
COPS3-215ENST00000578317 ORMDL1Q9P0S3 153 aa4.79□□□□□ -1.64
COPS3-215ENST00000578317 LRP1Q07954 4544 aaKnown RBP4.78□□□□□ -1.64
COPS3-215ENST00000578317 KRTAP1-4P0C5Y4 121 aa4.78□□□□□ -1.64
COPS3-215ENST00000578317 BAALC-AS2P0C853 105 aa4.78□□□□□ -1.64
COPS3-215ENST00000578317 FAM229BQ4G0N7 80 aa4.78□□□□□ -1.64
COPS3-215ENST00000578317 MYCBP2O75592 4640 aa4.78□□□□□ -1.64
COPS3-215ENST00000578317 C9JAW5 83 aa4.77□□□□□ -1.65
COPS3-215ENST00000578317 SMIM29Q86T20 159 aa4.77□□□□□ -1.65
COPS3-215ENST00000578317 DEFB105AQ8NG35 78 aa4.77□□□□□ -1.65
COPS3-215ENST00000578317 A0A1B0GV90 55 aa4.76□□□□□ -1.65
COPS3-215ENST00000578317 F8W1H4 67 aa4.76□□□□□ -1.65
COPS3-215ENST00000578317 H3BT86 120 aa4.76□□□□□ -1.65
COPS3-215ENST00000578317 LAMTOR3Q9UHA4 124 aa4.75□□□□□ -1.65
COPS3-215ENST00000578317 PRO0461Q9UI25 63 aa4.75□□□□□ -1.65
COPS3-215ENST00000578317 TNXBP22105 4242 aa4.75□□□□□ -1.65
COPS3-215ENST00000578317 ANKRD29Q8N6D5 301 aa4.75□□□□□ -1.65
COPS3-215ENST00000578317 PCLOQ9Y6V0 5065 aa4.75□□□□□ -1.65
COPS3-215ENST00000578317 CRYGAP11844 174 aa4.74□□□□□ -1.65
COPS3-215ENST00000578317 NDUFV3P56181 108 aaKnown RBP4.74□□□□□ -1.65
COPS3-215ENST00000578317 ANAPC11Q9NYG5 84 aa4.74□□□□□ -1.65
COPS3-215ENST00000578317 IGLV8-61A0A075B6I0 122 aa4.73□□□□□ -1.65
COPS3-215ENST00000578317 JMJD7-PLA2G4BH0Y9G9 81 aa4.72□□□□□ -1.65
COPS3-215ENST00000578317 SSBP3-AS1Q7Z2R9 100 aa4.72□□□□□ -1.65
COPS3-215ENST00000578317 OBSCN-AS1Q96MR7 158 aa4.72□□□□□ -1.65
COPS3-215ENST00000578317 A0A087X002 238 aa4.72□□□□□ -1.65
COPS3-215ENST00000578317 Q6ZVQ6 151 aa4.72□□□□□ -1.65
COPS3-215ENST00000578317 C3orf22Q8N5N4 141 aa4.72□□□□□ -1.65
COPS3-215ENST00000578317 F8WEM9 126 aa4.71□□□□□ -1.66
COPS3-215ENST00000578317 KRTAP13-2Q52LG2 175 aa4.71□□□□□ -1.66
COPS3-215ENST00000578317 MTURNQ8N3F0 131 aa4.71□□□□□ -1.66
COPS3-215ENST00000578317 OXTP01178 125 aa4.7□□□□□ -1.66
COPS3-215ENST00000578317 KRTAP10-8P60410 259 aa4.7□□□□□ -1.66
COPS3-215ENST00000578317 RBM3P98179 157 aaKnown RBP4.7□□□□□ -1.66
COPS3-215ENST00000578317 Q6JHZ5 121 aa4.7□□□□□ -1.66
COPS3-215ENST00000578317 Q8NBF4 154 aa4.69□□□□□ -1.66
COPS3-215ENST00000578317 TRBV7-4A0A0J9YYF1 115 aa4.68□□□□□ -1.66
COPS3-215ENST00000578317 PDE6GP18545 87 aa4.68□□□□□ -1.66
COPS3-215ENST00000578317 TEN1Q86WV5 123 aa4.68□□□□□ -1.66
COPS3-215ENST00000578317 TYMSOSQ8TAI1 123 aa4.68□□□□□ -1.66
COPS3-215ENST00000578317 FLG2Q5D862 2391 aaPredicted RBP4.68□□□□□ -1.66
COPS3-215ENST00000578317 KRTAP29-1A8MX34 341 aaPredicted RBP4.68□□□□□ -1.66
COPS3-215ENST00000578317 MOBPQ13875 183 aa4.68□□□□□ -1.66
COPS3-215ENST00000578317 Q8N9P0 234 aaPredicted RBP4.68□□□□□ -1.66
COPS3-215ENST00000578317 DSCR8Q96T75 97 aa4.68□□□□□ -1.66
COPS3-215ENST00000578317 LOC110117498A0A087WWA1 95 aa4.67□□□□□ -1.66
COPS3-215ENST00000578317 CD164Q04900 197 aa4.67□□□□□ -1.66
COPS3-215ENST00000578317 ETDBQ3ZM63 59 aa4.67□□□□□ -1.66
COPS3-215ENST00000578317 C9orf153Q5TBE3 101 aa4.67□□□□□ -1.66
COPS3-215ENST00000578317 IGFL1Q6UW32 110 aa4.67□□□□□ -1.66
COPS3-215ENST00000578317 PRAC1Q96KF2 57 aa4.67□□□□□ -1.66
COPS3-215ENST00000578317 IGKV2D-30A0A075B6S6 120 aa4.66□□□□□ -1.66
COPS3-215ENST00000578317 SPAG11AQ6PDA7 123 aa4.66□□□□□ -1.66
COPS3-215ENST00000578317 Q6Q795 121 aa4.66□□□□□ -1.66
COPS3-215ENST00000578317 A0A1B0GW54 56 aa4.65□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms