RNA–Protein interactions for RNA: ENST00000578093.1

PTPRM-206, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 3

Gene PTPRM, Length 464 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-206ENST00000578093 CCDC179H3BU77 68 aa2.18□□□□□ -2.06
PTPRM-206ENST00000578093 M0R378 163 aa2.18□□□□□ -2.06
PTPRM-206ENST00000578093 HSBP1O75506 76 aa2.18□□□□□ -2.06
PTPRM-206ENST00000578093 C6orf226Q5I0X4 101 aa2.18□□□□□ -2.06
PTPRM-206ENST00000578093 LYRM7Q5U5X0 104 aa2.18□□□□□ -2.06
PTPRM-206ENST00000578093 C2orf66Q6UXQ4 117 aa2.18□□□□□ -2.06
PTPRM-206ENST00000578093 FP248Q71RG6 208 aaPredicted RBP2.18□□□□□ -2.06
PTPRM-206ENST00000578093 FAM19A3Q7Z5A8 133 aa2.18□□□□□ -2.06
PTPRM-206ENST00000578093 FAM19A1Q7Z5A9 133 aa2.18□□□□□ -2.06
PTPRM-206ENST00000578093 Q8N377 158 aa2.18□□□□□ -2.06
PTPRM-206ENST00000578093 PLEKHB2Q96CS7 222 aa2.18□□□□□ -2.06
PTPRM-206ENST00000578093 OCR1Q9BZK8 76 aa2.18□□□□□ -2.06
PTPRM-206ENST00000578093 PRO0628Q9UI54 55 aa2.18□□□□□ -2.06
PTPRM-206ENST00000578093 FCGBPQ9Y6R7 5405 aaPredicted RBP2.18□□□□□ -2.06
PTPRM-206ENST00000578093 SYNE2Q8WXH0 6885 aaKnown RBP2.18□□□□□ -2.06
PTPRM-206ENST00000578093 LOC389332A0A1B0GUA5 103 aa2.17□□□□□ -2.06
PTPRM-206ENST00000578093 IGIPA6NJ69 53 aa2.17□□□□□ -2.06
PTPRM-206ENST00000578093 E9PLD3 99 aa2.17□□□□□ -2.06
PTPRM-206ENST00000578093 ETDBQ3ZM63 59 aa2.17□□□□□ -2.06
PTPRM-206ENST00000578093 LINC00337Q8N6G1 96 aa2.17□□□□□ -2.06
PTPRM-206ENST00000578093 NKAPP1Q8N9T2 125 aa2.17□□□□□ -2.06
PTPRM-206ENST00000578093 RAB37Q96AX2 223 aa2.17□□□□□ -2.06
PTPRM-206ENST00000578093 CHCHD1Q96BP2 118 aaKnown RBP2.17□□□□□ -2.06
PTPRM-206ENST00000578093 PRELID3AQ96N28 172 aa2.17□□□□□ -2.06
PTPRM-206ENST00000578093 SPRR4Q96PI1 79 aa2.17□□□□□ -2.06
PTPRM-206ENST00000578093 TINCRA0A1B0GVN0 87 aa2.16□□□□□ -2.06
PTPRM-206ENST00000578093 LEPROTL1O95214 131 aa2.16□□□□□ -2.06
PTPRM-206ENST00000578093 CXCL5P42830 114 aa2.16□□□□□ -2.06
PTPRM-206ENST00000578093 KRTAP10-5P60370 271 aa2.16□□□□□ -2.06
PTPRM-206ENST00000578093 HERVK_113P63121 156 aa2.16□□□□□ -2.06
PTPRM-206ENST00000578093 C2orf91Q6ZV80 131 aa2.16□□□□□ -2.06
PTPRM-206ENST00000578093 ORMDL3Q8N138 153 aa2.16□□□□□ -2.06
PTPRM-206ENST00000578093 FAM19A2Q8N3H0 131 aa2.16□□□□□ -2.06
PTPRM-206ENST00000578093 COX7B2Q8TF08 81 aa2.16□□□□□ -2.06
PTPRM-206ENST00000578093 HIGD2AQ9BW72 106 aa2.16□□□□□ -2.06
PTPRM-206ENST00000578093 HIGD1BQ9P298 99 aa2.16□□□□□ -2.06
PTPRM-206ENST00000578093 MACF1Q9UPN3 7388 aaKnown RBP2.16□□□□□ -2.06
PTPRM-206ENST00000578093 TRBV20-1A0A075B6N2 111 aa2.15□□□□□ -2.07
PTPRM-206ENST00000578093 UQCRQO14949 82 aa2.15□□□□□ -2.07
PTPRM-206ENST00000578093 ATP5LO75964 103 aa2.15□□□□□ -2.07
PTPRM-206ENST00000578093 TAL2Q16559 108 aa2.15□□□□□ -2.07
PTPRM-206ENST00000578093 C9orf153Q5TBE3 101 aa2.15□□□□□ -2.07
PTPRM-206ENST00000578093 LINC01545Q5VT33 79 aa2.15□□□□□ -2.07
PTPRM-206ENST00000578093 SPAG11AQ6PDA7 123 aa2.15□□□□□ -2.07
PTPRM-206ENST00000578093 TEN1Q86WV5 123 aa2.15□□□□□ -2.07
PTPRM-206ENST00000578093 Q8N8P6 123 aa2.15□□□□□ -2.07
PTPRM-206ENST00000578093 NAA38Q9BRA0 125 aaKnown RBP2.15□□□□□ -2.07
PTPRM-206ENST00000578093 PRO0461Q9UI25 63 aa2.15□□□□□ -2.07
PTPRM-206ENST00000578093 SCGB1C2P0DMR2 95 aa2.14□□□□□ -2.07
PTPRM-206ENST00000578093 PFN2P35080 140 aa2.14□□□□□ -2.07
PTPRM-206ENST00000578093 PCOTHQ58A44 107 aa2.14□□□□□ -2.07
PTPRM-206ENST00000578093 ATP5L2Q7Z4Y8 100 aa2.14□□□□□ -2.07
PTPRM-206ENST00000578093 IMUPQ9GZP8 106 aa2.14□□□□□ -2.07
PTPRM-206ENST00000578093 SND1-IT1Q9HBX3 110 aa2.14□□□□□ -2.07
PTPRM-206ENST00000578093 IGLV8-61A0A075B6I0 122 aa2.13□□□□□ -2.07
PTPRM-206ENST00000578093 A0A0U1RRA0 63 aa2.13□□□□□ -2.07
PTPRM-206ENST00000578093 DPM2O94777 84 aa2.13□□□□□ -2.07
PTPRM-206ENST00000578093 NDUFC2O95298 119 aa2.13□□□□□ -2.07
PTPRM-206ENST00000578093 SPINK1P00995 79 aa2.13□□□□□ -2.07
PTPRM-206ENST00000578093 TRACP01848 142 aa2.13□□□□□ -2.07
PTPRM-206ENST00000578093 DSCR10P59022 87 aa2.13□□□□□ -2.07
PTPRM-206ENST00000578093 TMEM258P61165 79 aa2.13□□□□□ -2.07
PTPRM-206ENST00000578093 MOBPQ13875 183 aa2.13□□□□□ -2.07
PTPRM-206ENST00000578093 CEND1Q8N111 149 aa2.13□□□□□ -2.07
PTPRM-206ENST00000578093 SMCR5Q8TEV8 140 aa2.13□□□□□ -2.07
PTPRM-206ENST00000578093 TOMM6Q96B49 74 aa2.13□□□□□ -2.07
PTPRM-206ENST00000578093 ZNF625Q96I27 306 aaPredicted RBP2.13□□□□□ -2.07
PTPRM-206ENST00000578093 TIMM17AQ99595 171 aa2.13□□□□□ -2.07
PTPRM-206ENST00000578093 KRTAP4-16G5E9R7 235 aaPredicted RBP2.12□□□□□ -2.07
PTPRM-206ENST00000578093 ERC2-IT1O76042 136 aa2.12□□□□□ -2.07
PTPRM-206ENST00000578093 NMUP48645 174 aa2.12□□□□□ -2.07
PTPRM-206ENST00000578093 ORMDL2Q53FV1 153 aa2.12□□□□□ -2.07
PTPRM-206ENST00000578093 LINC00483Q53H64 154 aa2.12□□□□□ -2.07
PTPRM-206ENST00000578093 LCE1FQ5T754 118 aa2.12□□□□□ -2.07
PTPRM-206ENST00000578093 C1orf195Q5TG92 126 aa2.12□□□□□ -2.07
PTPRM-206ENST00000578093 ANKRD29Q8N6D5 301 aa2.12□□□□□ -2.07
PTPRM-206ENST00000578093 COPS9Q8WXC6 57 aa2.12□□□□□ -2.07
PTPRM-206ENST00000578093 NHP2Q9NX24 153 aaKnown RBP2.12□□□□□ -2.07
PTPRM-206ENST00000578093 TRBV7-7A0A0K0K1E9 115 aa2.11□□□□□ -2.07
PTPRM-206ENST00000578093 FAM240AA0A1B0GVK7 77 aa2.11□□□□□ -2.07
PTPRM-206ENST00000578093 C9orf92A6NGG3 77 aa2.11□□□□□ -2.07
PTPRM-206ENST00000578093 M0R2T5 61 aa2.11□□□□□ -2.07
PTPRM-206ENST00000578093 NCR3O14931 201 aa2.11□□□□□ -2.07
PTPRM-206ENST00000578093 ZNF22P17026 224 aaPredicted RBP2.11□□□□□ -2.07
PTPRM-206ENST00000578093 SPRR1AP35321 89 aa2.11□□□□□ -2.07
PTPRM-206ENST00000578093 PSMB2P49721 201 aa2.11□□□□□ -2.07
PTPRM-206ENST00000578093 FXYD2P54710 66 aa2.11□□□□□ -2.07
PTPRM-206ENST00000578093 RPS29P62273 56 aaKnown RBP2.11□□□□□ -2.07
PTPRM-206ENST00000578093 C4orf26Q17RF5 130 aa2.11□□□□□ -2.07
PTPRM-206ENST00000578093 HRCT1Q6UXD1 115 aa2.11□□□□□ -2.07
PTPRM-206ENST00000578093 SCGB3A1Q96QR1 104 aa2.11□□□□□ -2.07
PTPRM-206ENST00000578093 NDUFA12Q9UI09 145 aa2.11□□□□□ -2.07
PTPRM-206ENST00000578093 ZNF706Q9Y5V0 76 aaPredicted RBP2.11□□□□□ -2.07
PTPRM-206ENST00000578093 A0A096LNJ9 63 aa2.1□□□□□ -2.07
PTPRM-206ENST00000578093 MYMXA0A1B0GTQ4 84 aa2.1□□□□□ -2.07
PTPRM-206ENST00000578093 K7EMI3 77 aa2.1□□□□□ -2.07
PTPRM-206ENST00000578093 SLC25A20O43772 301 aa2.1□□□□□ -2.07
PTPRM-206ENST00000578093 ACYP1P07311 99 aa2.1□□□□□ -2.07
PTPRM-206ENST00000578093 COX7CP15954 63 aa2.1□□□□□ -2.07
PTPRM-206ENST00000578093 KRTAP10-12P60413 245 aa2.1□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms