RNA–Protein interactions for RNA: ENST00000578078.1

KRT39-203, Transcript of keratin 39, humanhuman

TSL 1 (best)

Gene KRT39, Length 1,689 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT39-203ENST00000578078 TRRAPQ9Y4A5 3859 aa4.54□□□□□ -1.68
KRT39-203ENST00000578078 A6NED7 52 aa4.52□□□□□ -1.69
KRT39-203ENST00000578078 C9orf116Q5BN46 136 aaPredicted RBP4.52□□□□□ -1.69
KRT39-203ENST00000578078 LELP1Q5T871 98 aa4.51□□□□□ -1.69
KRT39-203ENST00000578078 SPTSSBQ8NFR3 76 aa4.51□□□□□ -1.69
KRT39-203ENST00000578078 PRR15LQ9BU68 103 aa4.51□□□□□ -1.69
KRT39-203ENST00000578078 LINC01558Q9Y6Z2 57 aa4.51□□□□□ -1.69
KRT39-203ENST00000578078 FBN1P35555 2871 aaKnown RBP4.51□□□□□ -1.69
KRT39-203ENST00000578078 LRCOL1A6NCL2 159 aa4.51□□□□□ -1.69
KRT39-203ENST00000578078 H3BNG1 76 aa4.51□□□□□ -1.69
KRT39-203ENST00000578078 ANGP03950 147 aaKnown RBP4.51□□□□□ -1.69
KRT39-203ENST00000578078 PRR3P79522 188 aaKnown RBP4.51□□□□□ -1.69
KRT39-203ENST00000578078 CLPSL2Q6UWE3 100 aa4.51□□□□□ -1.69
KRT39-203ENST00000578078 SPRR4Q96PI1 79 aa4.51□□□□□ -1.69
KRT39-203ENST00000578078 PLAC8Q9NZF1 115 aa4.51□□□□□ -1.69
KRT39-203ENST00000578078 DNAH3Q8TD57 4116 aa4.51□□□□□ -1.69
KRT39-203ENST00000578078 C3orf84H3BNL1 204 aa4.5□□□□□ -1.69
KRT39-203ENST00000578078 REG3AQ06141 175 aa4.5□□□□□ -1.69
KRT39-203ENST00000578078 REG3GQ6UW15 175 aa4.5□□□□□ -1.69
KRT39-203ENST00000578078 PKD1L1Q8TDX9 2849 aa4.49□□□□□ -1.69
KRT39-203ENST00000578078 STAB1Q9NY15 2570 aa4.49□□□□□ -1.69
KRT39-203ENST00000578078 CNBPP62633 177 aaKnown RBP4.49□□□□□ -1.69
KRT39-203ENST00000578078 Q8N9L7 120 aa4.49□□□□□ -1.69
KRT39-203ENST00000578078 RPL37AP8A6NKH3 93 aa4.48□□□□□ -1.69
KRT39-203ENST00000578078 KPRPQ5T749 579 aaPredicted RBP4.48□□□□□ -1.69
KRT39-203ENST00000578078 CASC2Q6XLA1 102 aa4.48□□□□□ -1.69
KRT39-203ENST00000578078 LINC01554Q52M75 96 aa4.48□□□□□ -1.69
KRT39-203ENST00000578078 Q8NBF4 154 aa4.48□□□□□ -1.69
KRT39-203ENST00000578078 IGLV10-54A0A075B6I4 117 aa4.47□□□□□ -1.69
KRT39-203ENST00000578078 MOBPQ13875 183 aa4.47□□□□□ -1.69
KRT39-203ENST00000578078 KRTAP19-4Q3LI73 84 aa4.47□□□□□ -1.69
KRT39-203ENST00000578078 Q8NDZ9 215 aa4.47□□□□□ -1.69
KRT39-203ENST00000578078 ANK2Q01484 3957 aa4.47□□□□□ -1.69
KRT39-203ENST00000578078 IGLV7-46A0A075B6I9 117 aa4.46□□□□□ -1.7
KRT39-203ENST00000578078 DEFB131BA0A096LNP1 70 aa4.46□□□□□ -1.7
KRT39-203ENST00000578078 A8MU10 97 aa4.46□□□□□ -1.7
KRT39-203ENST00000578078 DSCR10P59022 87 aa4.46□□□□□ -1.7
KRT39-203ENST00000578078 C9orf163Q8N9P6 203 aa4.46□□□□□ -1.7
KRT39-203ENST00000578078 PRR34Q9NV39 138 aa4.46□□□□□ -1.7
KRT39-203ENST00000578078 KLK12Q9UKR0 248 aa4.46□□□□□ -1.7
KRT39-203ENST00000578078 DHRS4-AS1Q9P1J3 65 aa4.45□□□□□ -1.7
KRT39-203ENST00000578078 SPAG11BQ08648 103 aa4.44□□□□□ -1.7
KRT39-203ENST00000578078 WFDC10BQ8IUB3 73 aa4.44□□□□□ -1.7
KRT39-203ENST00000578078 ST20-AS1Q8NBB2 130 aa4.44□□□□□ -1.7
KRT39-203ENST00000578078 NOTCH2NLQ7Z3S9 236 aa4.43□□□□□ -1.7
KRT39-203ENST00000578078 COL6A5A8TX70 2615 aa4.43□□□□□ -1.7
KRT39-203ENST00000578078 IGKV2D-24A0A075B6R9 120 aa4.42□□□□□ -1.7
KRT39-203ENST00000578078 K7EIL1 84 aa4.42□□□□□ -1.7
KRT39-203ENST00000578078 K7EQZ3 153 aa4.42□□□□□ -1.7
KRT39-203ENST00000578078 PRB2P02812 416 aaPredicted RBP4.42□□□□□ -1.7
KRT39-203ENST00000578078 COA5Q86WW8 74 aa4.42□□□□□ -1.7
KRT39-203ENST00000578078 Q8N1X5 172 aa4.42□□□□□ -1.7
KRT39-203ENST00000578078 DNHD1Q96M86 4753 aa4.42□□□□□ -1.7
KRT39-203ENST00000578078 A0A1W2PNM2 257 aa4.41□□□□□ -1.7
KRT39-203ENST00000578078 KRTAP29-1A8MX34 341 aaPredicted RBP4.41□□□□□ -1.7
KRT39-203ENST00000578078 LINC01556Q5JQF7 62 aa4.41□□□□□ -1.7
KRT39-203ENST00000578078 C1orf137Q5JT78 98 aa4.41□□□□□ -1.7
KRT39-203ENST00000578078 TENM3Q9P273 2699 aa4.41□□□□□ -1.7
KRT39-203ENST00000578078 H0Y9J4 135 aa4.41□□□□□ -1.7
KRT39-203ENST00000578078 PRR4Q16378 134 aa4.41□□□□□ -1.7
KRT39-203ENST00000578078 Q8N377 158 aa4.41□□□□□ -1.7
KRT39-203ENST00000578078 FBN3Q75N90 2809 aa4.4□□□□□ -1.7
KRT39-203ENST00000578078 H0Y9P7 68 aa4.4□□□□□ -1.71
KRT39-203ENST00000578078 LINC00313P59037 77 aa4.4□□□□□ -1.71
KRT39-203ENST00000578078 UNQ6190/PRO20217Q6UXQ8 127 aa4.4□□□□□ -1.71
KRT39-203ENST00000578078 NOTCH1P46531 2555 aa4.39□□□□□ -1.71
KRT39-203ENST00000578078 DNAH10OSP0CZ25 163 aa4.38□□□□□ -1.71
KRT39-203ENST00000578078 NBEAL1Q6ZS30 2694 aa4.38□□□□□ -1.71
KRT39-203ENST00000578078 CAMK2N2Q96S95 79 aa4.38□□□□□ -1.71
KRT39-203ENST00000578078 TP53AIP1Q9HCN2 124 aa4.38□□□□□ -1.71
KRT39-203ENST00000578078 C6orf48Q9UBA6 75 aa4.38□□□□□ -1.71
KRT39-203ENST00000578078 KRTAP26-1Q6PEX3 210 aa4.37□□□□□ -1.71
KRT39-203ENST00000578078 HUWE1Q7Z6Z7 4374 aaKnown RBP4.37□□□□□ -1.71
KRT39-203ENST00000578078 IGLV8-61A0A075B6I0 122 aa4.36□□□□□ -1.71
KRT39-203ENST00000578078 Q6ZRX8 168 aa4.36□□□□□ -1.71
KRT39-203ENST00000578078 C15orf56Q8N910 161 aa4.36□□□□□ -1.71
KRT39-203ENST00000578078 SPRR1AP35321 89 aa4.35□□□□□ -1.71
KRT39-203ENST00000578078 RTL8CO15255 209 aa4.35□□□□□ -1.71
KRT39-203ENST00000578078 RETNLBQ9BQ08 111 aa4.35□□□□□ -1.71
KRT39-203ENST00000578078 CHTF8P0CG12 524 aa4.33□□□□□ -1.72
KRT39-203ENST00000578078 XAGE1AQ9HD64 81 aa4.33□□□□□ -1.72
KRT39-203ENST00000578078 MGAM2Q2M2H8 2515 aa4.32□□□□□ -1.72
KRT39-203ENST00000578078 A8MWP4 228 aa4.32□□□□□ -1.72
KRT39-203ENST00000578078 KRTAP4-16G5E9R7 235 aaPredicted RBP4.32□□□□□ -1.72
KRT39-203ENST00000578078 SPINK7P58062 85 aa4.32□□□□□ -1.72
KRT39-203ENST00000578078 CASC10Q5T4H9 136 aa4.32□□□□□ -1.72
KRT39-203ENST00000578078 Q6ZR54 194 aa4.32□□□□□ -1.72
KRT39-203ENST00000578078 UBE2DNLQ8IWF7 75 aa4.32□□□□□ -1.72
KRT39-203ENST00000578078 COL7A1Q02388 2944 aa4.31□□□□□ -1.72
KRT39-203ENST00000578078 TLX1NBP0CAT3 122 aa4.31□□□□□ -1.72
KRT39-203ENST00000578078 C7orf33Q8WU49 177 aa4.31□□□□□ -1.72
KRT39-203ENST00000578078 DNAH9Q9NYC9 4486 aa4.3□□□□□ -1.72
KRT39-203ENST00000578078 SPAG11AQ6PDA7 123 aa4.3□□□□□ -1.72
KRT39-203ENST00000578078 SPATA8Q6RVD6 105 aa4.3□□□□□ -1.72
KRT39-203ENST00000578078 WFDC13Q8IUB5 93 aa4.3□□□□□ -1.72
KRT39-203ENST00000578078 DNAH1Q9P2D7 4330 aa4.29□□□□□ -1.72
KRT39-203ENST00000578078 DYNC2H1Q8NCM8 4307 aaKnown RBP4.29□□□□□ -1.72
KRT39-203ENST00000578078 NUPR2A6NF83 97 aa4.29□□□□□ -1.72
KRT39-203ENST00000578078 APLNQ9ULZ1 77 aa4.29□□□□□ -1.72
KRT39-203ENST00000578078 IGLV1-50A0A075B6I6 118 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms