RNA–Protein interactions for RNA: ENST00000576012.5

SCARF1-209, Transcript of scavenger receptor class F member 1, humanhuman

TSL 2

Gene SCARF1, Length 3,292 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-209ENST00000576012 IGKV2-24A0A0C4DH68 120 aa9.32□□□□□ -0.92
SCARF1-209ENST00000576012 LINC00476Q8WZB0 136 aa9.32□□□□□ -0.92
SCARF1-209ENST00000576012 DHRS4-AS1Q9P1J3 65 aa9.32□□□□□ -0.92
SCARF1-209ENST00000576012 CHKB-CPT1BH3BT56 60 aa9.3□□□□□ -0.92
SCARF1-209ENST00000576012 MP68P56378 58 aa9.29□□□□□ -0.92
SCARF1-209ENST00000576012 IGLV1-50A0A075B6I6 118 aa9.28□□□□□ -0.92
SCARF1-209ENST00000576012 ZCCHC13Q8WW36 166 aaKnown RBP9.28□□□□□ -0.92
SCARF1-209ENST00000576012 Q1T7F1 81 aa9.28□□□□□ -0.92
SCARF1-209ENST00000576012 TENM2Q9NT68 2774 aa9.27□□□□□ -0.93
SCARF1-209ENST00000576012 KRTAP7-1Q8IUC3 87 aa9.27□□□□□ -0.93
SCARF1-209ENST00000576012 DEFB131BA0A096LNP1 70 aa9.27□□□□□ -0.93
SCARF1-209ENST00000576012 PRR15LQ9BU68 103 aa9.26□□□□□ -0.93
SCARF1-209ENST00000576012 TNP2Q05952 138 aa9.26□□□□□ -0.93
SCARF1-209ENST00000576012 IGFL1Q6UW32 110 aa9.26□□□□□ -0.93
SCARF1-209ENST00000576012 B9D2Q9BPU9 175 aa9.25□□□□□ -0.93
SCARF1-209ENST00000576012 COL7A1Q02388 2944 aa9.25□□□□□ -0.93
SCARF1-209ENST00000576012 ANK2Q01484 3957 aa9.23□□□□□ -0.93
SCARF1-209ENST00000576012 H0Y9P7 68 aa9.23□□□□□ -0.93
SCARF1-209ENST00000576012 KRTAP4-16G5E9R7 235 aaPredicted RBP9.23□□□□□ -0.93
SCARF1-209ENST00000576012 SPRR4Q96PI1 79 aa9.22□□□□□ -0.93
SCARF1-209ENST00000576012 STAB2Q8WWQ8 2551 aa9.22□□□□□ -0.93
SCARF1-209ENST00000576012 LCE6AA0A183 80 aa9.22□□□□□ -0.93
SCARF1-209ENST00000576012 PCOTHQ58A44 107 aa9.22□□□□□ -0.93
SCARF1-209ENST00000576012 REG3GQ6UW15 175 aa9.21□□□□□ -0.94
SCARF1-209ENST00000576012 Q5VV11 94 aa9.2□□□□□ -0.94
SCARF1-209ENST00000576012 H0Y9J4 135 aa9.2□□□□□ -0.94
SCARF1-209ENST00000576012 CASC2Q6XLA1 102 aa9.19□□□□□ -0.94
SCARF1-209ENST00000576012 LINC00588Q9Y4M8 146 aa9.19□□□□□ -0.94
SCARF1-209ENST00000576012 LINC01556Q5JQF7 62 aa9.19□□□□□ -0.94
SCARF1-209ENST00000576012 UBE2AP49459 152 aa9.18□□□□□ -0.94
SCARF1-209ENST00000576012 A6NED7 52 aa9.17□□□□□ -0.94
SCARF1-209ENST00000576012 NDUFB1O75438 58 aa9.16□□□□□ -0.94
SCARF1-209ENST00000576012 KRTAP10-11P60412 298 aa9.16□□□□□ -0.94
SCARF1-209ENST00000576012 MDFIQ99750 246 aa9.16□□□□□ -0.94
SCARF1-209ENST00000576012 CYP4F30PQ9H0H9 118 aa9.15□□□□□ -0.94
SCARF1-209ENST00000576012 SPRR1AP35321 89 aa9.15□□□□□ -0.94
SCARF1-209ENST00000576012 NDUFS5O43920 106 aa9.14□□□□□ -0.95
SCARF1-209ENST00000576012 C16orf90A8MZG2 172 aa9.14□□□□□ -0.95
SCARF1-209ENST00000576012 Q8N9P0 234 aaPredicted RBP9.14□□□□□ -0.95
SCARF1-209ENST00000576012 CHTF8P0CG12 524 aa9.13□□□□□ -0.95
SCARF1-209ENST00000576012 SPAG11AQ6PDA7 123 aa9.12□□□□□ -0.95
SCARF1-209ENST00000576012 KRTAP24-1Q3LI83 254 aa9.11□□□□□ -0.95
SCARF1-209ENST00000576012 CNBPP62633 177 aaKnown RBP9.1□□□□□ -0.95
SCARF1-209ENST00000576012 A0A1B0GW54 56 aa9.1□□□□□ -0.95
SCARF1-209ENST00000576012 PHF5AQ7RTV0 110 aaKnown RBP9.08□□□□□ -0.96
SCARF1-209ENST00000576012 COA5Q86WW8 74 aa9.08□□□□□ -0.96
SCARF1-209ENST00000576012 LCA10Q71F78 164 aa9.07□□□□□ -0.96
SCARF1-209ENST00000576012 TLX1NBP0CAT3 122 aa9.07□□□□□ -0.96
SCARF1-209ENST00000576012 KRTAP11-1Q8IUC1 163 aa9.07□□□□□ -0.96
SCARF1-209ENST00000576012 H3BNG1 76 aa9.06□□□□□ -0.96
SCARF1-209ENST00000576012 DNAH10OSP0CZ25 163 aa9.06□□□□□ -0.96
SCARF1-209ENST00000576012 KRTAP29-1A8MX34 341 aaPredicted RBP9.06□□□□□ -0.96
SCARF1-209ENST00000576012 PLA2G2DQ9UNK4 145 aa9.04□□□□□ -0.96
SCARF1-209ENST00000576012 IGLV9-49A0A0B4J1Y8 123 aa9.04□□□□□ -0.96
SCARF1-209ENST00000576012 LIMD2Q9BT23 127 aa9.04□□□□□ -0.96
SCARF1-209ENST00000576012 IGLV5-37A0A075B6J1 123 aa9.02□□□□□ -0.97
SCARF1-209ENST00000576012 A8MWP4 228 aa9□□□□□ -0.97
SCARF1-209ENST00000576012 C7orf65Q6ZTY9 151 aa9□□□□□ -0.97
SCARF1-209ENST00000576012 LYSTQ99698 3801 aa9□□□□□ -0.97
SCARF1-209ENST00000576012 DNAH10Q8IVF4 4471 aa9□□□□□ -0.97
SCARF1-209ENST00000576012 IGHV6-1A0A0B4J1U7 121 aa8.97□□□□□ -0.97
SCARF1-209ENST00000576012 C9orf163Q8N9P6 203 aa8.96□□□□□ -0.97
SCARF1-209ENST00000576012 LINC00472Q9H8W2 130 aa8.96□□□□□ -0.97
SCARF1-209ENST00000576012 SPANXA2-OT1Q8N9U9 137 aa8.95□□□□□ -0.98
SCARF1-209ENST00000576012 A6NN06 94 aa8.95□□□□□ -0.98
SCARF1-209ENST00000576012 KRTAP1-5Q9BYS1 174 aa8.95□□□□□ -0.98
SCARF1-209ENST00000576012 ATP11AUNQ6ZP68 121 aa8.95□□□□□ -0.98
SCARF1-209ENST00000576012 MMP24-AS1A0A0U1RRL7 71 aa8.94□□□□□ -0.98
SCARF1-209ENST00000576012 SPINK7P58062 85 aa8.94□□□□□ -0.98
SCARF1-209ENST00000576012 ANAPC11Q9NYG5 84 aa8.93□□□□□ -0.98
SCARF1-209ENST00000576012 LOC101927531A0A1B0GV80 90 aa8.92□□□□□ -0.98
SCARF1-209ENST00000576012 K7EIL1 84 aa8.92□□□□□ -0.98
SCARF1-209ENST00000576012 SPINK6Q6UWN8 80 aa8.9□□□□□ -0.98
SCARF1-209ENST00000576012 Q75L30 129 aa8.9□□□□□ -0.98
SCARF1-209ENST00000576012 IGLV7-46A0A075B6I9 117 aa8.9□□□□□ -0.99
SCARF1-209ENST00000576012 LINC00313P59037 77 aa8.88□□□□□ -0.99
SCARF1-209ENST00000576012 IGLV8-61A0A075B6I0 122 aa8.88□□□□□ -0.99
SCARF1-209ENST00000576012 H3BPC8 53 aa8.88□□□□□ -0.99
SCARF1-209ENST00000576012 MOBPQ13875 183 aa8.88□□□□□ -0.99
SCARF1-209ENST00000576012 UBE2DNLQ8IWF7 75 aa8.87□□□□□ -0.99
SCARF1-209ENST00000576012 A0A087X002 238 aa8.87□□□□□ -0.99
SCARF1-209ENST00000576012 PANO1I0J062 215 aa8.87□□□□□ -0.99
SCARF1-209ENST00000576012 NOTCH2NLQ7Z3S9 236 aa8.87□□□□□ -0.99
SCARF1-209ENST00000576012 LINC01554Q52M75 96 aa8.86□□□□□ -0.99
SCARF1-209ENST00000576012 HRES1P13985 223 aa8.85□□□□□ -0.99
SCARF1-209ENST00000576012 RETNLBQ9BQ08 111 aa8.85□□□□□ -0.99
SCARF1-209ENST00000576012 PRAC1Q96KF2 57 aa8.84□□□□□ -0.99
SCARF1-209ENST00000576012 CDC42SE1Q9NRR8 79 aa8.84□□□□□ -0.99
SCARF1-209ENST00000576012 CDK2AP2O75956 126 aa8.84□□□□□ -0.99
SCARF1-209ENST00000576012 C8orf17Q9NRJ1 99 aa8.83□□□□□ -1
SCARF1-209ENST00000576012 CMYA5Q8N3K9 4069 aa8.83□□□□□ -1
SCARF1-209ENST00000576012 A0A0A0MQY5 61 aa8.8□□□□□ -1
SCARF1-209ENST00000576012 TGP01266 2768 aa8.8□□□□□ -1
SCARF1-209ENST00000576012 ZNF706Q9Y5V0 76 aaPredicted RBP8.78□□□□□ -1
SCARF1-209ENST00000576012 ADM2Q7Z4H4 148 aa8.78□□□□□ -1
SCARF1-209ENST00000576012 LINC01558Q9Y6Z2 57 aa8.78□□□□□ -1
SCARF1-209ENST00000576012 Q96NJ1 140 aa8.77□□□□□ -1.01
SCARF1-209ENST00000576012 Q5W150 140 aa8.73□□□□□ -1.01
SCARF1-209ENST00000576012 TP53AIP1Q9HCN2 124 aa8.73□□□□□ -1.01
SCARF1-209ENST00000576012 DNAH9Q9NYC9 4486 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms