RNA–Protein interactions for RNA: ENST00000575331.1

AC113189.4-201, humanhuman

TSL 1 (best) BASIC

Gene AC113189.4, Length 5,553 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC113189.4-201ENST00000575331 CHD9Q3L8U1 2897 aa13.51□□□□□ -0.25
AC113189.4-201ENST00000575331 LCE6AA0A183 80 aa13.48□□□□□ -0.25
AC113189.4-201ENST00000575331 H1FX-AS1Q4G0G2 97 aa13.47□□□□□ -0.25
AC113189.4-201ENST00000575331 ITPR3Q14573 2671 aa13.45□□□□□ -0.26
AC113189.4-201ENST00000575331 KRTAP10-1P60331 282 aa13.44□□□□□ -0.26
AC113189.4-201ENST00000575331 RPL37P61927 97 aaKnown RBP13.44□□□□□ -0.26
AC113189.4-201ENST00000575331 HECTD1Q9ULT8 2610 aa13.43□□□□□ -0.26
AC113189.4-201ENST00000575331 ROMO1P60602 79 aa13.42□□□□□ -0.26
AC113189.4-201ENST00000575331 PANO1I0J062 215 aa13.38□□□□□ -0.27
AC113189.4-201ENST00000575331 KRTAP10-2P60368 255 aa13.37□□□□□ -0.27
AC113189.4-201ENST00000575331 CEP350Q5VT06 3117 aa13.35□□□□□ -0.27
AC113189.4-201ENST00000575331 SEC61BP60468 96 aaKnown RBP13.34□□□□□ -0.27
AC113189.4-201ENST00000575331 RPS29P62273 56 aaKnown RBP13.33□□□□□ -0.28
AC113189.4-201ENST00000575331 SPATA8Q6RVD6 105 aa13.32□□□□□ -0.28
AC113189.4-201ENST00000575331 R4GN34 69 aa13.31□□□□□ -0.28
AC113189.4-201ENST00000575331 C5orf42Q9H799 3197 aa13.29□□□□□ -0.28
AC113189.4-201ENST00000575331 TRANK1O15050 2925 aa13.27□□□□□ -0.28
AC113189.4-201ENST00000575331 Q5VSD8 79 aa13.26□□□□□ -0.29
AC113189.4-201ENST00000575331 ATRQ13535 2644 aa13.25□□□□□ -0.29
AC113189.4-201ENST00000575331 MGAM2Q2M2H8 2515 aa13.23□□□□□ -0.29
AC113189.4-201ENST00000575331 KRTAP7-1Q8IUC3 87 aa13.23□□□□□ -0.29
AC113189.4-201ENST00000575331 H3BS24 57 aa13.22□□□□□ -0.29
AC113189.4-201ENST00000575331 USP24Q9UPU5 2620 aa13.21□□□□□ -0.29
AC113189.4-201ENST00000575331 A0A087X002 238 aa13.21□□□□□ -0.3
AC113189.4-201ENST00000575331 Q6ZRN7 208 aaPredicted RBP13.2□□□□□ -0.3
AC113189.4-201ENST00000575331 HTTP42858 3142 aa13.18□□□□□ -0.3
AC113189.4-201ENST00000575331 NOTCH2NLQ7Z3S9 236 aa13.18□□□□□ -0.3
AC113189.4-201ENST00000575331 KRTAP11-1Q8IUC1 163 aa13.18□□□□□ -0.3
AC113189.4-201ENST00000575331 KRTAP13-1Q8IUC0 172 aa13.17□□□□□ -0.3
AC113189.4-201ENST00000575331 A6NN06 94 aa13.15□□□□□ -0.3
AC113189.4-201ENST00000575331 M0R2T5 61 aa13.14□□□□□ -0.31
AC113189.4-201ENST00000575331 A0A0A0MQY5 61 aa13.14□□□□□ -0.31
AC113189.4-201ENST00000575331 HELZ2Q9BYK8 2649 aaKnown RBP13.11□□□□□ -0.31
AC113189.4-201ENST00000575331 M0QZ58 72 aa13.08□□□□□ -0.31
AC113189.4-201ENST00000575331 ADM2Q7Z4H4 148 aa13.04□□□□□ -0.32
AC113189.4-201ENST00000575331 FLNBO75369 2602 aaKnown RBP13.02□□□□□ -0.33
AC113189.4-201ENST00000575331 UTRNP46939 3433 aa13.01□□□□□ -0.33
AC113189.4-201ENST00000575331 MAST4O15021 2626 aa12.99□□□□□ -0.33
AC113189.4-201ENST00000575331 CFAP46Q8IYW2 2715 aa12.98□□□□□ -0.33
AC113189.4-201ENST00000575331 ZNF292O60281 2723 aa12.95□□□□□ -0.34
AC113189.4-201ENST00000575331 KRTAP25-1Q3LHN0 102 aa12.92□□□□□ -0.34
AC113189.4-201ENST00000575331 KRTAP13-2Q52LG2 175 aa12.92□□□□□ -0.34
AC113189.4-201ENST00000575331 MGAQ8IWI9 3026 aa12.79□□□□□ -0.36
AC113189.4-201ENST00000575331 GCN1Q92616 2671 aaKnown RBP12.77□□□□□ -0.37
AC113189.4-201ENST00000575331 PLAC4Q8WY50 150 aa12.76□□□□□ -0.37
AC113189.4-201ENST00000575331 AKAP13Q12802 2813 aa12.75□□□□□ -0.37
AC113189.4-201ENST00000575331 CHD6Q8TD26 2715 aa12.75□□□□□ -0.37
AC113189.4-201ENST00000575331 PCNTO95613 3336 aa12.73□□□□□ -0.37
AC113189.4-201ENST00000575331 A8MU10 97 aa12.72□□□□□ -0.37
AC113189.4-201ENST00000575331 A0A0C4DFX4 3053 aa12.7□□□□□ -0.38
AC113189.4-201ENST00000575331 UNC79Q9P2D8 2635 aa12.68□□□□□ -0.38
AC113189.4-201ENST00000575331 A8MUU9 505 aa12.66□□□□□ -0.38
AC113189.4-201ENST00000575331 CFAP54Q96N23 3096 aa12.65□□□□□ -0.38
AC113189.4-201ENST00000575331 C20orf166-AS1Q96NR2 134 aa12.63□□□□□ -0.39
AC113189.4-201ENST00000575331 CENPEQ02224 2701 aa12.61□□□□□ -0.39
AC113189.4-201ENST00000575331 NBEAL1Q6ZS30 2694 aa12.6□□□□□ -0.39
AC113189.4-201ENST00000575331 MKI67P46013 3256 aaKnown RBP12.58□□□□□ -0.4
AC113189.4-201ENST00000575331 TEP1Q99973 2627 aaKnown RBP12.57□□□□□ -0.4
AC113189.4-201ENST00000575331 RANBP2P49792 3224 aaKnown RBP12.55□□□□□ -0.4
AC113189.4-201ENST00000575331 SETXQ7Z333 2677 aaKnown RBP12.54□□□□□ -0.4
AC113189.4-201ENST00000575331 TEX15Q9BXT5 2789 aa12.54□□□□□ -0.4
AC113189.4-201ENST00000575331 IGSF10Q6WRI0 2623 aa12.52□□□□□ -0.41
AC113189.4-201ENST00000575331 KMT2BQ9UMN6 2715 aaPredicted RBP12.51□□□□□ -0.41
AC113189.4-201ENST00000575331 KRTAP16-1A8MUX0 517 aa12.49□□□□□ -0.41
AC113189.4-201ENST00000575331 NBEAL2Q6ZNJ1 2754 aa12.43□□□□□ -0.42
AC113189.4-201ENST00000575331 KRTAP21-3Q3LHN1 58 aa12.41□□□□□ -0.42
AC113189.4-201ENST00000575331 STAB1Q9NY15 2570 aa12.41□□□□□ -0.42
AC113189.4-201ENST00000575331 DMBT1Q9UGM3 2413 aaPredicted RBP12.35□□□□□ -0.43
AC113189.4-201ENST00000575331 KRTAP1-4P0C5Y4 121 aa12.35□□□□□ -0.43
AC113189.4-201ENST00000575331 COL6A5A8TX70 2615 aa12.35□□□□□ -0.43
AC113189.4-201ENST00000575331 LAMA3Q16787 3333 aa12.34□□□□□ -0.43
AC113189.4-201ENST00000575331 TRIOO75962 3097 aa12.32□□□□□ -0.44
AC113189.4-201ENST00000575331 FRYQ5TBA9 3013 aa12.28□□□□□ -0.44
AC113189.4-201ENST00000575331 WDFY4Q6ZS81 3184 aa12.28□□□□□ -0.44
AC113189.4-201ENST00000575331 NSD1Q96L73 2696 aaPredicted RBP12.28□□□□□ -0.44
AC113189.4-201ENST00000575331 NOTCH1P46531 2555 aa12.27□□□□□ -0.45
AC113189.4-201ENST00000575331 LAMA2P24043 3122 aaKnown RBP12.25□□□□□ -0.45
AC113189.4-201ENST00000575331 ITPR2Q14571 2701 aa12.24□□□□□ -0.45
AC113189.4-201ENST00000575331 TNP1P09430 55 aa12.24□□□□□ -0.45
AC113189.4-201ENST00000575331 DSPP15924 2871 aaKnown RBP12.24□□□□□ -0.45
AC113189.4-201ENST00000575331 NDUFAF8A1L188 74 aa12.22□□□□□ -0.45
AC113189.4-201ENST00000575331 PP632Q6XCG6 107 aa12.18□□□□□ -0.46
AC113189.4-201ENST00000575331 XP32Q5T750 250 aa12.14□□□□□ -0.47
AC113189.4-201ENST00000575331 H0YAA0 97 aa12.13□□□□□ -0.47
AC113189.4-201ENST00000575331 UBR5O95071 2799 aaPredicted RBP12.11□□□□□ -0.47
AC113189.4-201ENST00000575331 BRCA2P51587 3418 aa12.1□□□□□ -0.47
AC113189.4-201ENST00000575331 VPS13AQ96RL7 3174 aa12.07□□□□□ -0.48
AC113189.4-201ENST00000575331 UNC80Q8N2C7 3258 aa12.05□□□□□ -0.48
AC113189.4-201ENST00000575331 ITPR1Q14643 2758 aa12.05□□□□□ -0.48
AC113189.4-201ENST00000575331 PRUNE2Q8WUY3 3088 aa12.04□□□□□ -0.48
AC113189.4-201ENST00000575331 FLG2Q5D862 2391 aaPredicted RBP12.02□□□□□ -0.49
AC113189.4-201ENST00000575331 KALRNO60229 2985 aa12.01□□□□□ -0.49
AC113189.4-201ENST00000575331 MAP1AP78559 2803 aaPredicted RBP12□□□□□ -0.49
AC113189.4-201ENST00000575331 STAB2Q8WWQ8 2551 aa11.98□□□□□ -0.49
AC113189.4-201ENST00000575331 TPRXLQ17RH7 258 aa11.95□□□□□ -0.5
AC113189.4-201ENST00000575331 KRTAP13-3Q3SY46 172 aa11.93□□□□□ -0.5
AC113189.4-201ENST00000575331 CDH23Q9H251 3354 aa11.92□□□□□ -0.5
AC113189.4-201ENST00000575331 UTP20O75691 2785 aaKnown RBP11.91□□□□□ -0.5
AC113189.4-201ENST00000575331 APCP25054 2843 aa11.91□□□□□ -0.5
AC113189.4-201ENST00000575331 C10orf95Q9H7T3 257 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms