RNA–Protein interactions for RNA: ENST00000575176.5

SMG6-216, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 557 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-216ENST00000575176 DEFB105AQ8NG35 78 aa4.78□□□□□ -1.64
SMG6-216ENST00000575176 LAMTOR3Q9UHA4 124 aa4.78□□□□□ -1.64
SMG6-216ENST00000575176 XP32Q5T750 250 aa4.77□□□□□ -1.65
SMG6-216ENST00000575176 hADV29S1A0JD25 119 aa4.76□□□□□ -1.65
SMG6-216ENST00000575176 ASB16-AS1Q495Z4 193 aa4.76□□□□□ -1.65
SMG6-216ENST00000575176 HRCT1Q6UXD1 115 aa4.76□□□□□ -1.65
SMG6-216ENST00000575176 CDIP1Q9H305 208 aa4.76□□□□□ -1.65
SMG6-216ENST00000575176 NHP2Q9NX24 153 aaKnown RBP4.76□□□□□ -1.65
SMG6-216ENST00000575176 H7C2G1 150 aa4.75□□□□□ -1.65
SMG6-216ENST00000575176 C1orf195Q5TG92 126 aa4.75□□□□□ -1.65
SMG6-216ENST00000575176 IGFL1Q6UW32 110 aa4.75□□□□□ -1.65
SMG6-216ENST00000575176 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.75□□□□□ -1.65
SMG6-216ENST00000575176 PRO1933Q9H354 126 aa4.75□□□□□ -1.65
SMG6-216ENST00000575176 A0A1B0GV90 55 aa4.74□□□□□ -1.65
SMG6-216ENST00000575176 K7ERJ3 54 aa4.74□□□□□ -1.65
SMG6-216ENST00000575176 TRIAP1O43715 76 aa4.74□□□□□ -1.65
SMG6-216ENST00000575176 BVES-AS1Q5T3Y7 98 aa4.74□□□□□ -1.65
SMG6-216ENST00000575176 LIMD2Q9BT23 127 aa4.74□□□□□ -1.65
SMG6-216ENST00000575176 HSD52Q0P140 79 aa4.73□□□□□ -1.65
SMG6-216ENST00000575176 KRTAP19-2Q3LHN2 52 aa4.73□□□□□ -1.65
SMG6-216ENST00000575176 VAMP3Q15836 100 aa4.72□□□□□ -1.65
SMG6-216ENST00000575176 PPDPFLQ8WWR9 84 aa4.72□□□□□ -1.65
SMG6-216ENST00000575176 CLEC2BQ92478 149 aa4.72□□□□□ -1.65
SMG6-216ENST00000575176 PRO1854Q9UHT4 67 aa4.72□□□□□ -1.65
SMG6-216ENST00000575176 TSTD3H0UI37 97 aa4.71□□□□□ -1.66
SMG6-216ENST00000575176 RAB37Q96AX2 223 aa4.71□□□□□ -1.66
SMG6-216ENST00000575176 TRBV7-7A0A0K0K1E9 115 aa4.7□□□□□ -1.66
SMG6-216ENST00000575176 H3BUT2 72 aa4.7□□□□□ -1.66
SMG6-216ENST00000575176 OCIAD2Q56VL3 154 aa4.7□□□□□ -1.66
SMG6-216ENST00000575176 UQCR10Q9UDW1 63 aa4.7□□□□□ -1.66
SMG6-216ENST00000575176 FLGP20930 4061 aaPredicted RBP4.7□□□□□ -1.66
SMG6-216ENST00000575176 TMEM238LA0A1B0GVL6 79 aa4.69□□□□□ -1.66
SMG6-216ENST00000575176 A6NJY4 79 aa4.69□□□□□ -1.66
SMG6-216ENST00000575176 H0YGX0 51 aa4.69□□□□□ -1.66
SMG6-216ENST00000575176 LCE2CQ5TA81 110 aa4.69□□□□□ -1.66
SMG6-216ENST00000575176 Q6JHZ5 121 aa4.69□□□□□ -1.66
SMG6-216ENST00000575176 A0A1B0GX51 115 aa4.68□□□□□ -1.66
SMG6-216ENST00000575176 Q6Q795 121 aa4.68□□□□□ -1.66
SMG6-216ENST00000575176 C9orf92A6NGG3 77 aa4.67□□□□□ -1.66
SMG6-216ENST00000575176 Q96NJ1 140 aa4.67□□□□□ -1.66
SMG6-216ENST00000575176 F8WEM9 126 aa4.66□□□□□ -1.66
SMG6-216ENST00000575176 A0A1W2PNM2 257 aa4.65□□□□□ -1.67
SMG6-216ENST00000575176 M0R143 59 aa4.65□□□□□ -1.67
SMG6-216ENST00000575176 NDUFV3P56181 108 aaKnown RBP4.65□□□□□ -1.67
SMG6-216ENST00000575176 SEC61BP60468 96 aaKnown RBP4.64□□□□□ -1.67
SMG6-216ENST00000575176 SNHG12Q9BXW3 62 aa4.64□□□□□ -1.67
SMG6-216ENST00000575176 LST1O00453 97 aa4.63□□□□□ -1.67
SMG6-216ENST00000575176 RPL37P61927 97 aaKnown RBP4.63□□□□□ -1.67
SMG6-216ENST00000575176 TCL1BO95988 128 aa4.62□□□□□ -1.67
SMG6-216ENST00000575176 PCOTHQ58A44 107 aa4.62□□□□□ -1.67
SMG6-216ENST00000575176 PCP4P48539 62 aa4.61□□□□□ -1.67
SMG6-216ENST00000575176 TEN1Q86WV5 123 aa4.61□□□□□ -1.67
SMG6-216ENST00000575176 A0A0U1RQV1 116 aa4.6□□□□□ -1.67
SMG6-216ENST00000575176 H3BMG7 143 aa4.6□□□□□ -1.67
SMG6-216ENST00000575176 TRACP01848 142 aa4.6□□□□□ -1.67
SMG6-216ENST00000575176 A0A087WSZ3 146 aa4.59□□□□□ -1.67
SMG6-216ENST00000575176 TRBV7-4A0A0J9YYF1 115 aa4.59□□□□□ -1.67
SMG6-216ENST00000575176 ORMDL1Q9P0S3 153 aa4.59□□□□□ -1.67
SMG6-216ENST00000575176 FABP2P12104 132 aa4.58□□□□□ -1.68
SMG6-216ENST00000575176 NAA38Q9BRA0 125 aaKnown RBP4.58□□□□□ -1.68
SMG6-216ENST00000575176 A0A1B0GV72 72 aa4.57□□□□□ -1.68
SMG6-216ENST00000575176 KRTAP16-1A8MUX0 517 aa4.57□□□□□ -1.68
SMG6-216ENST00000575176 PSMB2P49721 201 aa4.57□□□□□ -1.68
SMG6-216ENST00000575176 MT1HP80294 61 aa4.57□□□□□ -1.68
SMG6-216ENST00000575176 UBE2V1Q13404 147 aa4.57□□□□□ -1.68
SMG6-216ENST00000575176 COL5A1-AS1Q5SY13 56 aa4.56□□□□□ -1.68
SMG6-216ENST00000575176 Q75L30 129 aa4.56□□□□□ -1.68
SMG6-216ENST00000575176 OBSCN-AS1Q96MR7 158 aa4.56□□□□□ -1.68
SMG6-216ENST00000575176 SS18L2Q9UHA2 77 aa4.56□□□□□ -1.68
SMG6-216ENST00000575176 TMEM256-PLSCR3K7ERE1 68 aa4.55□□□□□ -1.68
SMG6-216ENST00000575176 DNAL4O96015 105 aa4.55□□□□□ -1.68
SMG6-216ENST00000575176 C20orf166-AS1Q96NR2 134 aa4.55□□□□□ -1.68
SMG6-216ENST00000575176 LINC00472Q9H8W2 130 aa4.55□□□□□ -1.68
SMG6-216ENST00000575176 A8MUU9 505 aa4.54□□□□□ -1.68
SMG6-216ENST00000575176 SNCGO76070 127 aa4.54□□□□□ -1.68
SMG6-216ENST00000575176 COX6CP09669 75 aa4.54□□□□□ -1.68
SMG6-216ENST00000575176 H3BQ85 93 aa4.53□□□□□ -1.68
SMG6-216ENST00000575176 GHRHP01286 108 aa4.53□□□□□ -1.68
SMG6-216ENST00000575176 NOTCH2NLQ7Z3S9 236 aa4.53□□□□□ -1.68
SMG6-216ENST00000575176 ANKRD29Q8N6D5 301 aa4.53□□□□□ -1.68
SMG6-216ENST00000575176 KRTAP9-2Q9BYQ4 174 aa4.53□□□□□ -1.68
SMG6-216ENST00000575176 CCKP06307 115 aa4.52□□□□□ -1.69
SMG6-216ENST00000575176 C21orf62-AS1Q17RA5 79 aa4.52□□□□□ -1.69
SMG6-216ENST00000575176 TAX1BP3O14907 124 aa4.51□□□□□ -1.69
SMG6-216ENST00000575176 DSCR10P59022 87 aa4.51□□□□□ -1.69
SMG6-216ENST00000575176 Q6ZQT0 140 aa4.5□□□□□ -1.69
SMG6-216ENST00000575176 BAALC-AS2P0C853 105 aa4.49□□□□□ -1.69
SMG6-216ENST00000575176 LORP23490 312 aaPredicted RBP4.49□□□□□ -1.69
SMG6-216ENST00000575176 ATXN8Q156A1 80 aa4.49□□□□□ -1.69
SMG6-216ENST00000575176 LOC110117498A0A087WWA1 95 aa4.48□□□□□ -1.69
SMG6-216ENST00000575176 SCGB1C2P0DMR2 95 aa4.48□□□□□ -1.69
SMG6-216ENST00000575176 RBM3P98179 157 aaKnown RBP4.48□□□□□ -1.69
SMG6-216ENST00000575176 DEFB116Q30KQ4 102 aa4.48□□□□□ -1.69
SMG6-216ENST00000575176 SIGMAR1Q99720 223 aa4.48□□□□□ -1.69
SMG6-216ENST00000575176 IGKV4-1P06312 121 aa4.47□□□□□ -1.69
SMG6-216ENST00000575176 C9orf118A6NHY6 69 aa4.46□□□□□ -1.7
SMG6-216ENST00000575176 BATFQ16520 125 aa4.46□□□□□ -1.7
SMG6-216ENST00000575176 A0A1W2PPM0 123 aa4.45□□□□□ -1.7
SMG6-216ENST00000575176 KRTAP10-6P60371 365 aaPredicted RBP4.45□□□□□ -1.7
SMG6-216ENST00000575176 TRBV20-1A0A075B6N2 111 aa4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms