RNA–Protein interactions for RNA: ENST00000573827.1

SMG6-214, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 601 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-214ENST00000573827 VAMP3Q15836 100 aa9.39□□□□□ -0.91
SMG6-214ENST00000573827 C12orf57Q99622 126 aa9.38□□□□□ -0.91
SMG6-214ENST00000573827 FLGP20930 4061 aaPredicted RBP9.37□□□□□ -0.91
SMG6-214ENST00000573827 HIST1H4GQ99525 98 aa9.35□□□□□ -0.91
SMG6-214ENST00000573827 IGFL1Q6UW32 110 aa9.34□□□□□ -0.91
SMG6-214ENST00000573827 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.34□□□□□ -0.91
SMG6-214ENST00000573827 CFC1BP0CG36 223 aa9.33□□□□□ -0.92
SMG6-214ENST00000573827 CFC1P0CG37 223 aa9.33□□□□□ -0.92
SMG6-214ENST00000573827 F8WEM9 126 aa9.32□□□□□ -0.92
SMG6-214ENST00000573827 OCIAD2Q56VL3 154 aa9.32□□□□□ -0.92
SMG6-214ENST00000573827 Q6JHZ5 121 aa9.32□□□□□ -0.92
SMG6-214ENST00000573827 TRBV7-7A0A0K0K1E9 115 aa9.31□□□□□ -0.92
SMG6-214ENST00000573827 TCL1BO95988 128 aa9.31□□□□□ -0.92
SMG6-214ENST00000573827 RPL37P61927 97 aaKnown RBP9.31□□□□□ -0.92
SMG6-214ENST00000573827 BVES-AS1Q5T3Y7 98 aa9.31□□□□□ -0.92
SMG6-214ENST00000573827 C2orf91Q6ZV80 131 aa9.31□□□□□ -0.92
SMG6-214ENST00000573827 CLEC2BQ92478 149 aa9.31□□□□□ -0.92
SMG6-214ENST00000573827 C14orf144Q96I85 54 aa9.31□□□□□ -0.92
SMG6-214ENST00000573827 HIGD1BQ9P298 99 aa9.31□□□□□ -0.92
SMG6-214ENST00000573827 PPDPFLQ8WWR9 84 aa9.3□□□□□ -0.92
SMG6-214ENST00000573827 MT1HP80294 61 aa9.28□□□□□ -0.92
SMG6-214ENST00000573827 FAM218AQ96MZ4 157 aa9.27□□□□□ -0.93
SMG6-214ENST00000573827 PAM16Q9Y3D7 125 aa9.27□□□□□ -0.93
SMG6-214ENST00000573827 FSIP2Q5CZC0 6907 aa9.26□□□□□ -0.93
SMG6-214ENST00000573827 A0A0B4J2C4 111 aa9.26□□□□□ -0.93
SMG6-214ENST00000573827 SPATA45Q537H7 98 aa9.26□□□□□ -0.93
SMG6-214ENST00000573827 H3BUT2 72 aa9.25□□□□□ -0.93
SMG6-214ENST00000573827 LCE2DQ5TA82 110 aaPredicted RBP9.24□□□□□ -0.93
SMG6-214ENST00000573827 KRTAP9-6A0A140TA67 174 aa9.21□□□□□ -0.94
SMG6-214ENST00000573827 RAB37Q96AX2 223 aa9.21□□□□□ -0.94
SMG6-214ENST00000573827 VAMP8Q9BV40 100 aa9.21□□□□□ -0.94
SMG6-214ENST00000573827 SNHG12Q9BXW3 62 aa9.21□□□□□ -0.94
SMG6-214ENST00000573827 H0YGX0 51 aa9.2□□□□□ -0.94
SMG6-214ENST00000573827 Q6Q795 121 aa9.2□□□□□ -0.94
SMG6-214ENST00000573827 CEND1Q8N111 149 aa9.19□□□□□ -0.94
SMG6-214ENST00000573827 FXYD2P54710 66 aa9.18□□□□□ -0.94
SMG6-214ENST00000573827 NDUFV3P56181 108 aaKnown RBP9.15□□□□□ -0.94
SMG6-214ENST00000573827 OBSCN-AS1Q96MR7 158 aa9.15□□□□□ -0.94
SMG6-214ENST00000573827 PRO1854Q9UHT4 67 aa9.15□□□□□ -0.94
SMG6-214ENST00000573827 LORP23490 312 aaPredicted RBP9.14□□□□□ -0.95
SMG6-214ENST00000573827 Q75L30 129 aa9.14□□□□□ -0.95
SMG6-214ENST00000573827 A0A1B0GX51 115 aa9.13□□□□□ -0.95
SMG6-214ENST00000573827 LST1O00453 97 aa9.13□□□□□ -0.95
SMG6-214ENST00000573827 PYY3Q5JQD4 70 aa9.13□□□□□ -0.95
SMG6-214ENST00000573827 TRIAP1O43715 76 aa9.12□□□□□ -0.95
SMG6-214ENST00000573827 TEN1Q86WV5 123 aa9.12□□□□□ -0.95
SMG6-214ENST00000573827 Q96NJ1 140 aa9.12□□□□□ -0.95
SMG6-214ENST00000573827 KRTAP10-6P60371 365 aaPredicted RBP9.1□□□□□ -0.95
SMG6-214ENST00000573827 TMEM238LA0A1B0GVL6 79 aa9.09□□□□□ -0.95
SMG6-214ENST00000573827 A6NJY4 79 aa9.09□□□□□ -0.95
SMG6-214ENST00000573827 SS18L2Q9UHA2 77 aa9.09□□□□□ -0.95
SMG6-214ENST00000573827 A0A1W2PNM2 257 aa9.08□□□□□ -0.96
SMG6-214ENST00000573827 H3BMG7 143 aa9.08□□□□□ -0.96
SMG6-214ENST00000573827 SNCGO76070 127 aa9.08□□□□□ -0.96
SMG6-214ENST00000573827 A0A087WSZ3 146 aa9.07□□□□□ -0.96
SMG6-214ENST00000573827 K7ERJ3 54 aa9.06□□□□□ -0.96
SMG6-214ENST00000573827 FABP2P12104 132 aa9.05□□□□□ -0.96
SMG6-214ENST00000573827 HSD52Q0P140 79 aa9.05□□□□□ -0.96
SMG6-214ENST00000573827 C20orf166-AS1Q96NR2 134 aa9.05□□□□□ -0.96
SMG6-214ENST00000573827 A8MUU9 505 aa9.04□□□□□ -0.96
SMG6-214ENST00000573827 GHRHP01286 108 aa9.02□□□□□ -0.97
SMG6-214ENST00000573827 ATP11AUNQ6ZP68 121 aa9.02□□□□□ -0.97
SMG6-214ENST00000573827 COX6B2Q6YFQ2 88 aa9.01□□□□□ -0.97
SMG6-214ENST00000573827 CRCT1Q9UGL9 99 aa8.99□□□□□ -0.97
SMG6-214ENST00000573827 ORMDL1Q9P0S3 153 aa8.98□□□□□ -0.97
SMG6-214ENST00000573827 TRBV7-4A0A0J9YYF1 115 aa8.97□□□□□ -0.97
SMG6-214ENST00000573827 DSCR10P59022 87 aa8.96□□□□□ -0.98
SMG6-214ENST00000573827 KRTAP16-1A8MUX0 517 aa8.95□□□□□ -0.98
SMG6-214ENST00000573827 ANKRD29Q8N6D5 301 aa8.95□□□□□ -0.98
SMG6-214ENST00000573827 UQCR10Q9UDW1 63 aa8.95□□□□□ -0.98
SMG6-214ENST00000573827 H3BQ85 93 aa8.94□□□□□ -0.98
SMG6-214ENST00000573827 M0R2T5 61 aa8.94□□□□□ -0.98
SMG6-214ENST00000573827 DNAL4O96015 105 aa8.94□□□□□ -0.98
SMG6-214ENST00000573827 PSMB2P49721 201 aa8.94□□□□□ -0.98
SMG6-214ENST00000573827 A0A1B0GV72 72 aa8.93□□□□□ -0.98
SMG6-214ENST00000573827 LINC00472Q9H8W2 130 aa8.93□□□□□ -0.98
SMG6-214ENST00000573827 TMEM256-PLSCR3K7ERE1 68 aa8.92□□□□□ -0.98
SMG6-214ENST00000573827 UBE2V1Q13404 147 aa8.91□□□□□ -0.98
SMG6-214ENST00000573827 NOTCH2NLQ7Z3S9 236 aa8.91□□□□□ -0.98
SMG6-214ENST00000573827 SIGMAR1Q99720 223 aa8.91□□□□□ -0.98
SMG6-214ENST00000573827 TMA7Q9Y2S6 64 aaKnown RBP8.91□□□□□ -0.98
SMG6-214ENST00000573827 TRACP01848 142 aa8.9□□□□□ -0.98
SMG6-214ENST00000573827 COX6CP09669 75 aa8.9□□□□□ -0.98
SMG6-214ENST00000573827 CCKP06307 115 aa8.88□□□□□ -0.99
SMG6-214ENST00000573827 IGKV4-1P06312 121 aa8.88□□□□□ -0.99
SMG6-214ENST00000573827 USH2AO75445 5202 aa8.87□□□□□ -0.99
SMG6-214ENST00000573827 LINC00313P59037 77 aa8.87□□□□□ -0.99
SMG6-214ENST00000573827 DEFB116Q30KQ4 102 aa8.86□□□□□ -0.99
SMG6-214ENST00000573827 SSPOA2VEC9 5147 aa8.82□□□□□ -1
SMG6-214ENST00000573827 MPLKIPQ8TAP9 179 aa8.81□□□□□ -1
SMG6-214ENST00000573827 KRTAP9-8Q9BYQ0 159 aa8.81□□□□□ -1
SMG6-214ENST00000573827 SCGB1C2P0DMR2 95 aa8.79□□□□□ -1
SMG6-214ENST00000573827 RBM3P98179 157 aaKnown RBP8.79□□□□□ -1
SMG6-214ENST00000573827 IGHV6-1A0A0B4J1U7 121 aa8.78□□□□□ -1
SMG6-214ENST00000573827 BAALC-AS2P0C853 105 aa8.77□□□□□ -1.01
SMG6-214ENST00000573827 HRES1P13985 223 aa8.77□□□□□ -1.01
SMG6-214ENST00000573827 TRBV20-1A0A075B6N2 111 aa8.75□□□□□ -1.01
SMG6-214ENST00000573827 A0A1B0GVX0 72 aa8.75□□□□□ -1.01
SMG6-214ENST00000573827 VPS25Q9BRG1 176 aa8.75□□□□□ -1.01
SMG6-214ENST00000573827 DSCR8Q96T75 97 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms