RNA–Protein interactions for RNA: ENST00000573795.5

SNF8-216, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-216ENST00000573795 LINC00575Q6W349 94 aa11.43□□□□□ -0.58
SNF8-216ENST00000573795 TRBV7-7A0A0K0K1E9 115 aa11.42□□□□□ -0.58
SNF8-216ENST00000573795 C20orf202A1L168 122 aa11.42□□□□□ -0.58
SNF8-216ENST00000573795 IGFL1Q6UW32 110 aa11.42□□□□□ -0.58
SNF8-216ENST00000573795 USH2AO75445 5202 aa11.42□□□□□ -0.58
SNF8-216ENST00000573795 Q6ZQY7 126 aa11.41□□□□□ -0.58
SNF8-216ENST00000573795 CLEC2BQ92478 149 aa11.41□□□□□ -0.58
SNF8-216ENST00000573795 SSPOA2VEC9 5147 aa11.4□□□□□ -0.58
SNF8-216ENST00000573795 Q75L30 129 aa11.4□□□□□ -0.58
SNF8-216ENST00000573795 OBSCN-AS1Q96MR7 158 aa11.4□□□□□ -0.58
SNF8-216ENST00000573795 Q6JHZ5 121 aa11.39□□□□□ -0.59
SNF8-216ENST00000573795 hADV29S1A0JD25 119 aa11.36□□□□□ -0.59
SNF8-216ENST00000573795 VAMP3Q15836 100 aa11.36□□□□□ -0.59
SNF8-216ENST00000573795 Q6Q795 121 aa11.36□□□□□ -0.59
SNF8-216ENST00000573795 ATP11AUNQ6ZP68 121 aa11.35□□□□□ -0.59
SNF8-216ENST00000573795 OCIAD2Q56VL3 154 aa11.34□□□□□ -0.59
SNF8-216ENST00000573795 KRTAP9-8Q9BYQ0 159 aa11.29□□□□□ -0.6
SNF8-216ENST00000573795 SNRPEP62304 92 aaKnown RBP11.28□□□□□ -0.6
SNF8-216ENST00000573795 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.28□□□□□ -0.6
SNF8-216ENST00000573795 H3BUT2 72 aa11.26□□□□□ -0.61
SNF8-216ENST00000573795 LST1O00453 97 aa11.25□□□□□ -0.61
SNF8-216ENST00000573795 Q96NJ1 140 aa11.25□□□□□ -0.61
SNF8-216ENST00000573795 KRTAP9-1A8MXZ3 250 aaPredicted RBP11.24□□□□□ -0.61
SNF8-216ENST00000573795 PPDPFLQ8WWR9 84 aa11.24□□□□□ -0.61
SNF8-216ENST00000573795 C20orf166-AS1Q96NR2 134 aa11.23□□□□□ -0.61
SNF8-216ENST00000573795 A8MUU9 505 aa11.21□□□□□ -0.61
SNF8-216ENST00000573795 C12orf57Q99622 126 aa11.21□□□□□ -0.61
SNF8-216ENST00000573795 CFC1P0CG37 223 aa11.2□□□□□ -0.62
SNF8-216ENST00000573795 KRTAP9-7A8MTY7 169 aa11.19□□□□□ -0.62
SNF8-216ENST00000573795 SNHG12Q9BXW3 62 aa11.19□□□□□ -0.62
SNF8-216ENST00000573795 BVES-AS1Q5T3Y7 98 aa11.18□□□□□ -0.62
SNF8-216ENST00000573795 SCGB1D1O95968 90 aa11.15□□□□□ -0.62
SNF8-216ENST00000573795 HIST3H2BBQ8N257 126 aa11.15□□□□□ -0.62
SNF8-216ENST00000573795 HIST1H2BLQ99880 126 aa11.15□□□□□ -0.62
SNF8-216ENST00000573795 SS18L2Q9UHA2 77 aa11.15□□□□□ -0.62
SNF8-216ENST00000573795 FCGBPQ9Y6R7 5405 aaPredicted RBP11.14□□□□□ -0.63
SNF8-216ENST00000573795 HSBP1L1C9JCN9 74 aa11.12□□□□□ -0.63
SNF8-216ENST00000573795 TEN1Q86WV5 123 aa11.1□□□□□ -0.63
SNF8-216ENST00000573795 HIST1H4GQ99525 98 aa11.09□□□□□ -0.63
SNF8-216ENST00000573795 TRBV20-1A0A075B6N2 111 aa11.08□□□□□ -0.64
SNF8-216ENST00000573795 A0A087WSZ3 146 aa11.08□□□□□ -0.64
SNF8-216ENST00000573795 KRTAP16-1A8MUX0 517 aa11.08□□□□□ -0.64
SNF8-216ENST00000573795 MT2AP02795 61 aa11.08□□□□□ -0.64
SNF8-216ENST00000573795 DSCR10P59022 87 aa11.08□□□□□ -0.64
SNF8-216ENST00000573795 FAM218AQ96MZ4 157 aa11.08□□□□□ -0.64
SNF8-216ENST00000573795 NDUFV3P56181 108 aaKnown RBP11.06□□□□□ -0.64
SNF8-216ENST00000573795 S100A2P29034 98 aa11.04□□□□□ -0.64
SNF8-216ENST00000573795 COX8AP10176 69 aa11.02□□□□□ -0.65
SNF8-216ENST00000573795 MT1FP04733 61 aa11.01□□□□□ -0.65
SNF8-216ENST00000573795 A0A1W2PNM2 257 aa10.99□□□□□ -0.65
SNF8-216ENST00000573795 H0YGX0 51 aa10.99□□□□□ -0.65
SNF8-216ENST00000573795 LCE2BO14633 110 aa10.99□□□□□ -0.65
SNF8-216ENST00000573795 H3BMG7 143 aa10.98□□□□□ -0.65
SNF8-216ENST00000573795 MPLKIPQ8TAP9 179 aa10.98□□□□□ -0.65
SNF8-216ENST00000573795 DLEU1O43261 78 aa10.97□□□□□ -0.65
SNF8-216ENST00000573795 SIGMAR1Q99720 223 aa10.97□□□□□ -0.65
SNF8-216ENST00000573795 A0A0B4J2C4 111 aa10.96□□□□□ -0.65
SNF8-216ENST00000573795 RAB37Q96AX2 223 aa10.96□□□□□ -0.65
SNF8-216ENST00000573795 HRES1P13985 223 aa10.95□□□□□ -0.66
SNF8-216ENST00000573795 KRTAP19-1Q8IUB9 90 aa10.95□□□□□ -0.66
SNF8-216ENST00000573795 SNCGO76070 127 aa10.94□□□□□ -0.66
SNF8-216ENST00000573795 KRTAP9-3Q9BYQ3 159 aa10.94□□□□□ -0.66
SNF8-216ENST00000573795 FAM236DA0A1B0GTK5 79 aa10.93□□□□□ -0.66
SNF8-216ENST00000573795 FAM236CP0DP71 79 aa10.93□□□□□ -0.66
SNF8-216ENST00000573795 LINC00313P59037 77 aa10.93□□□□□ -0.66
SNF8-216ENST00000573795 NOTCH2NLQ7Z3S9 236 aa10.92□□□□□ -0.66
SNF8-216ENST00000573795 FABP2P12104 132 aa10.91□□□□□ -0.66
SNF8-216ENST00000573795 A0A1B0GX51 115 aa10.9□□□□□ -0.66
SNF8-216ENST00000573795 C14orf144Q96I85 54 aa10.89□□□□□ -0.67
SNF8-216ENST00000573795 HIGD1BQ9P298 99 aa10.89□□□□□ -0.67
SNF8-216ENST00000573795 IGKV4-1P06312 121 aa10.88□□□□□ -0.67
SNF8-216ENST00000573795 C2orf91Q6ZV80 131 aa10.88□□□□□ -0.67
SNF8-216ENST00000573795 S100A6P06703 90 aa10.86□□□□□ -0.67
SNF8-216ENST00000573795 KRTAP10-10P60014 251 aa10.85□□□□□ -0.67
SNF8-216ENST00000573795 RBM12B-AS1Q9P1G2 102 aa10.85□□□□□ -0.67
SNF8-216ENST00000573795 TRBV7-4A0A0J9YYF1 115 aa10.84□□□□□ -0.67
SNF8-216ENST00000573795 GHRHP01286 108 aa10.84□□□□□ -0.67
SNF8-216ENST00000573795 TRIAP1O43715 76 aa10.82□□□□□ -0.68
SNF8-216ENST00000573795 DEFB116Q30KQ4 102 aa10.82□□□□□ -0.68
SNF8-216ENST00000573795 LINC00472Q9H8W2 130 aa10.82□□□□□ -0.68
SNF8-216ENST00000573795 MACF1Q9UPN3 7388 aaKnown RBP10.81□□□□□ -0.68
SNF8-216ENST00000573795 ANKRD29Q8N6D5 301 aa10.81□□□□□ -0.68
SNF8-216ENST00000573795 PRO1854Q9UHT4 67 aa10.81□□□□□ -0.68
SNF8-216ENST00000573795 A0A1B0GV72 72 aa10.8□□□□□ -0.68
SNF8-216ENST00000573795 CEND1Q8N111 149 aa10.8□□□□□ -0.68
SNF8-216ENST00000573795 PAM16Q9Y3D7 125 aa10.8□□□□□ -0.68
SNF8-216ENST00000573795 SYNE2Q8WXH0 6885 aaKnown RBP10.8□□□□□ -0.68
SNF8-216ENST00000573795 SPATA45Q537H7 98 aa10.79□□□□□ -0.68
SNF8-216ENST00000573795 FXYD2P54710 66 aa10.77□□□□□ -0.69
SNF8-216ENST00000573795 IGHV6-1A0A0B4J1U7 121 aa10.76□□□□□ -0.69
SNF8-216ENST00000573795 ORMDL1Q9P0S3 153 aa10.74□□□□□ -0.69
SNF8-216ENST00000573795 TMEM238LA0A1B0GVL6 79 aa10.72□□□□□ -0.69
SNF8-216ENST00000573795 A6NJY4 79 aa10.72□□□□□ -0.69
SNF8-216ENST00000573795 CCKP06307 115 aa10.72□□□□□ -0.69
SNF8-216ENST00000573795 DNAL4O96015 105 aa10.7□□□□□ -0.7
SNF8-216ENST00000573795 TRACP01848 142 aa10.7□□□□□ -0.7
SNF8-216ENST00000573795 VAMP8Q9BV40 100 aa10.69□□□□□ -0.7
SNF8-216ENST00000573795 A0A1B0GVX0 72 aa10.67□□□□□ -0.7
SNF8-216ENST00000573795 H3BQ85 93 aa10.67□□□□□ -0.7
SNF8-216ENST00000573795 C8orf87E5RJ46 101 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms