RNA–Protein interactions for RNA: ENST00000572980.5

TVP23A-206, Transcript of trans-golgi network vesicle protein 23 homolog A, humanhuman

TSL 1 (best)

Gene TVP23A, Length 1,574 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23A-206ENST00000572980 NAA38Q9BRA0 125 aaKnown RBP13.66□□□□□ -0.22
TVP23A-206ENST00000572980 DNAL4O96015 105 aa13.65□□□□□ -0.22
TVP23A-206ENST00000572980 C9orf153Q5TBE3 101 aa13.65□□□□□ -0.22
TVP23A-206ENST00000572980 SSBP3-AS1Q7Z2R9 100 aa13.64□□□□□ -0.23
TVP23A-206ENST00000572980 SMIM29Q86T20 159 aa13.63□□□□□ -0.23
TVP23A-206ENST00000572980 LYRM7Q5U5X0 104 aa13.62□□□□□ -0.23
TVP23A-206ENST00000572980 TNXBP22105 4242 aa13.62□□□□□ -0.23
TVP23A-206ENST00000572980 H3BUT2 72 aa13.62□□□□□ -0.23
TVP23A-206ENST00000572980 C9orf118A6NHY6 69 aa13.61□□□□□ -0.23
TVP23A-206ENST00000572980 LST1O00453 97 aa13.61□□□□□ -0.23
TVP23A-206ENST00000572980 TAX1BP3O14907 124 aa13.61□□□□□ -0.23
TVP23A-206ENST00000572980 LINC00304Q8N9R0 145 aa13.61□□□□□ -0.23
TVP23A-206ENST00000572980 Q8NBF4 154 aa13.61□□□□□ -0.23
TVP23A-206ENST00000572980 TRACP01848 142 aa13.6□□□□□ -0.23
TVP23A-206ENST00000572980 COL5A1-AS1Q5SY13 56 aa13.59□□□□□ -0.23
TVP23A-206ENST00000572980 F8WEM9 126 aa13.58□□□□□ -0.24
TVP23A-206ENST00000572980 H3BQ85 93 aa13.57□□□□□ -0.24
TVP23A-206ENST00000572980 C4orf48Q5BLP8 95 aa13.57□□□□□ -0.24
TVP23A-206ENST00000572980 ORMDL1Q9P0S3 153 aa13.57□□□□□ -0.24
TVP23A-206ENST00000572980 ATXN8Q156A1 80 aa13.56□□□□□ -0.24
TVP23A-206ENST00000572980 SPAG11AQ6PDA7 123 aa13.56□□□□□ -0.24
TVP23A-206ENST00000572980 TCL1BO95988 128 aa13.54□□□□□ -0.24
TVP23A-206ENST00000572980 TRBV20-1A0A075B6N2 111 aa13.54□□□□□ -0.24
TVP23A-206ENST00000572980 FABP2P12104 132 aa13.54□□□□□ -0.24
TVP23A-206ENST00000572980 A0A1W2PPM0 123 aa13.52□□□□□ -0.25
TVP23A-206ENST00000572980 TMEM256-PLSCR3K7ERE1 68 aa13.51□□□□□ -0.25
TVP23A-206ENST00000572980 NDUFV3P56181 108 aaKnown RBP13.49□□□□□ -0.25
TVP23A-206ENST00000572980 SPINK1P00995 79 aa13.48□□□□□ -0.25
TVP23A-206ENST00000572980 IGLV8-61A0A075B6I0 122 aa13.47□□□□□ -0.25
TVP23A-206ENST00000572980 Q6JHZ5 121 aa13.46□□□□□ -0.25
TVP23A-206ENST00000572980 BAALC-AS2P0C853 105 aa13.43□□□□□ -0.26
TVP23A-206ENST00000572980 UBE2V1Q13404 147 aa13.43□□□□□ -0.26
TVP23A-206ENST00000572980 H3BMG7 143 aa13.42□□□□□ -0.26
TVP23A-206ENST00000572980 CD164Q04900 197 aa13.41□□□□□ -0.26
TVP23A-206ENST00000572980 RPS29P62273 56 aaKnown RBP13.41□□□□□ -0.26
TVP23A-206ENST00000572980 HERC1Q15751 4861 aa13.4□□□□□ -0.26
TVP23A-206ENST00000572980 HRCT1Q6UXD1 115 aa13.4□□□□□ -0.26
TVP23A-206ENST00000572980 A0A0G2JQZ4 141 aa13.39□□□□□ -0.27
TVP23A-206ENST00000572980 IGFL1Q6UW32 110 aa13.39□□□□□ -0.27
TVP23A-206ENST00000572980 SPCS1Q9Y6A9 102 aa13.39□□□□□ -0.27
TVP23A-206ENST00000572980 C9JAW5 83 aa13.37□□□□□ -0.27
TVP23A-206ENST00000572980 ANKRD29Q8N6D5 301 aa13.37□□□□□ -0.27
TVP23A-206ENST00000572980 LIMD2Q9BT23 127 aa13.32□□□□□ -0.28
TVP23A-206ENST00000572980 A0A1B0GV72 72 aa13.31□□□□□ -0.28
TVP23A-206ENST00000572980 RBM3P98179 157 aaKnown RBP13.28□□□□□ -0.28
TVP23A-206ENST00000572980 RETNLBQ9BQ08 111 aa13.28□□□□□ -0.28
TVP23A-206ENST00000572980 H3BT86 120 aa13.27□□□□□ -0.29
TVP23A-206ENST00000572980 K7EP34 96 aa13.27□□□□□ -0.29
TVP23A-206ENST00000572980 JMJD7-PLA2G4BH0Y9G9 81 aa13.26□□□□□ -0.29
TVP23A-206ENST00000572980 PRR4Q16378 134 aa13.26□□□□□ -0.29
TVP23A-206ENST00000572980 TEN1Q86WV5 123 aa13.26□□□□□ -0.29
TVP23A-206ENST00000572980 Q5XG85 94 aa13.25□□□□□ -0.29
TVP23A-206ENST00000572980 TRBV7-7A0A0K0K1E9 115 aa13.24□□□□□ -0.29
TVP23A-206ENST00000572980 Q6Q795 121 aa13.24□□□□□ -0.29
TVP23A-206ENST00000572980 GTF2H5Q6ZYL4 71 aa13.24□□□□□ -0.29
TVP23A-206ENST00000572980 DSCR8Q96T75 97 aa13.24□□□□□ -0.29
TVP23A-206ENST00000572980 MTURNQ8N3F0 131 aa13.24□□□□□ -0.29
TVP23A-206ENST00000572980 TRBV7-4A0A0J9YYF1 115 aa13.21□□□□□ -0.29
TVP23A-206ENST00000572980 A0A1W2PNM2 257 aa13.19□□□□□ -0.3
TVP23A-206ENST00000572980 FP248Q71RG6 208 aaPredicted RBP13.18□□□□□ -0.3
TVP23A-206ENST00000572980 CCKP06307 115 aa13.17□□□□□ -0.3
TVP23A-206ENST00000572980 OBSCN-AS1Q96MR7 158 aa13.15□□□□□ -0.3
TVP23A-206ENST00000572980 SS18L2Q9UHA2 77 aa13.15□□□□□ -0.3
TVP23A-206ENST00000572980 IGLV7-46A0A075B6I9 117 aa13.14□□□□□ -0.31
TVP23A-206ENST00000572980 PDE6GP18545 87 aa13.14□□□□□ -0.31
TVP23A-206ENST00000572980 A0A087WSZ3 146 aa13.13□□□□□ -0.31
TVP23A-206ENST00000572980 ASB16-AS1Q495Z4 193 aa13.13□□□□□ -0.31
TVP23A-206ENST00000572980 VPS25Q9BRG1 176 aa13.13□□□□□ -0.31
TVP23A-206ENST00000572980 PRO0461Q9UI25 63 aa13.12□□□□□ -0.31
TVP23A-206ENST00000572980 LOC110117498A0A087WWA1 95 aa13.11□□□□□ -0.31
TVP23A-206ENST00000572980 SMCPP49901 116 aaPredicted RBP13.11□□□□□ -0.31
TVP23A-206ENST00000572980 C14orf132Q9NPU4 83 aa13.11□□□□□ -0.31
TVP23A-206ENST00000572980 C1orf195Q5TG92 126 aa13.1□□□□□ -0.31
TVP23A-206ENST00000572980 Q6ZQT0 140 aa13.09□□□□□ -0.31
TVP23A-206ENST00000572980 HMCN2Q8NDA2 5059 aa13.08□□□□□ -0.32
TVP23A-206ENST00000572980 F8W1H4 67 aa13.07□□□□□ -0.32
TVP23A-206ENST00000572980 C21orf62-AS1Q17RA5 79 aa13.07□□□□□ -0.32
TVP23A-206ENST00000572980 A0A1B0GW54 56 aa13.03□□□□□ -0.32
TVP23A-206ENST00000572980 TPRXLQ17RH7 258 aa13.03□□□□□ -0.32
TVP23A-206ENST00000572980 A0A1B0GV90 55 aa12.97□□□□□ -0.33
TVP23A-206ENST00000572980 KRTAP13-3Q3SY46 172 aa12.95□□□□□ -0.34
TVP23A-206ENST00000572980 CDIP1Q9H305 208 aa12.94□□□□□ -0.34
TVP23A-206ENST00000572980 Q96NJ1 140 aa12.93□□□□□ -0.34
TVP23A-206ENST00000572980 ETDBQ3ZM63 59 aa12.91□□□□□ -0.34
TVP23A-206ENST00000572980 LINC00472Q9H8W2 130 aa12.9□□□□□ -0.35
TVP23A-206ENST00000572980 LPAP08519 4548 aa12.89□□□□□ -0.35
TVP23A-206ENST00000572980 IGKV4-1P06312 121 aa12.86□□□□□ -0.35
TVP23A-206ENST00000572980 LRP2P98164 4655 aa12.85□□□□□ -0.35
TVP23A-206ENST00000572980 C9orf92A6NGG3 77 aa12.84□□□□□ -0.35
TVP23A-206ENST00000572980 DEFB116Q30KQ4 102 aa12.84□□□□□ -0.35
TVP23A-206ENST00000572980 SIGMAR1Q99720 223 aa12.84□□□□□ -0.35
TVP23A-206ENST00000572980 NREPQ16612 68 aa12.83□□□□□ -0.36
TVP23A-206ENST00000572980 J3KT08 172 aa12.8□□□□□ -0.36
TVP23A-206ENST00000572980 XP32Q5T750 250 aa12.75□□□□□ -0.37
TVP23A-206ENST00000572980 NDUFB1O75438 58 aa12.69□□□□□ -0.38
TVP23A-206ENST00000572980 Q6ZVQ6 151 aa12.69□□□□□ -0.38
TVP23A-206ENST00000572980 LINC00846Q9NV44 126 aa12.69□□□□□ -0.38
TVP23A-206ENST00000572980 UBL5Q9BZL1 73 aa12.69□□□□□ -0.38
TVP23A-206ENST00000572980 IGHV6-1A0A0B4J1U7 121 aa12.67□□□□□ -0.38
TVP23A-206ENST00000572980 A0A1B0GVX0 72 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms