RNA–Protein interactions for RNA: ENST00000569454.1

CDH13-213, Transcript of cadherin 13, humanhuman

TSL 3

Gene CDH13, Length 877 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-213ENST00000569454 PRR26Q8N8Z3 221 aa3.7□□□□□ -1.82
CDH13-213ENST00000569454 LINC00474Q9P2X8 69 aa3.7□□□□□ -1.82
CDH13-213ENST00000569454 RNF213Q63HN8 5207 aa3.69□□□□□ -1.82
CDH13-213ENST00000569454 KRTAP4-16G5E9R7 235 aaPredicted RBP3.69□□□□□ -1.82
CDH13-213ENST00000569454 FSIP2Q5CZC0 6907 aa3.68□□□□□ -1.82
CDH13-213ENST00000569454 IGLV5-48A0A075B6I7 105 aa3.68□□□□□ -1.82
CDH13-213ENST00000569454 A0A0A0MQY5 61 aa3.68□□□□□ -1.82
CDH13-213ENST00000569454 IGKV3D-7A0A0C4DH55 119 aa3.68□□□□□ -1.82
CDH13-213ENST00000569454 FUSP35637 526 aaKnown RBP eCLIP3.68□□□□□ -1.82
CDH13-213ENST00000569454 CASC10Q5T4H9 136 aa3.68□□□□□ -1.82
CDH13-213ENST00000569454 REG3GQ6UW15 175 aa3.68□□□□□ -1.82
CDH13-213ENST00000569454 Q6ZVQ6 151 aa3.68□□□□□ -1.82
CDH13-213ENST00000569454 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP3.68□□□□□ -1.82
CDH13-213ENST00000569454 HECTD4Q9Y4D8 3996 aa3.68□□□□□ -1.82
CDH13-213ENST00000569454 FRAS1Q86XX4 4008 aa3.67□□□□□ -1.82
CDH13-213ENST00000569454 NBDYA0A0U1RRE5 68 aa3.67□□□□□ -1.82
CDH13-213ENST00000569454 RPL37AP8A6NKH3 93 aa3.67□□□□□ -1.82
CDH13-213ENST00000569454 COX7CP15954 63 aa3.67□□□□□ -1.82
CDH13-213ENST00000569454 C3orf22Q8N5N4 141 aa3.67□□□□□ -1.82
CDH13-213ENST00000569454 KRTAP1-5Q9BYS1 174 aa3.67□□□□□ -1.82
CDH13-213ENST00000569454 A0A0U1RQV1 116 aa3.66□□□□□ -1.82
CDH13-213ENST00000569454 FAM236DA0A1B0GTK5 79 aa3.66□□□□□ -1.82
CDH13-213ENST00000569454 F8WEM9 126 aa3.66□□□□□ -1.82
CDH13-213ENST00000569454 H0Y9J4 135 aa3.66□□□□□ -1.82
CDH13-213ENST00000569454 FAM236CP0DP71 79 aa3.66□□□□□ -1.82
CDH13-213ENST00000569454 LINC01547P58512 204 aaPredicted RBP3.66□□□□□ -1.82
CDH13-213ENST00000569454 UBE2BP63146 152 aa3.66□□□□□ -1.82
CDH13-213ENST00000569454 PMAIP1Q13794 54 aa3.66□□□□□ -1.82
CDH13-213ENST00000569454 C9orf153Q5TBE3 101 aa3.66□□□□□ -1.82
CDH13-213ENST00000569454 SERP2Q8N6R1 65 aa3.66□□□□□ -1.82
CDH13-213ENST00000569454 C9orf163Q8N9P6 203 aa3.66□□□□□ -1.82
CDH13-213ENST00000569454 A0A096LNI7 61 aa3.65□□□□□ -1.83
CDH13-213ENST00000569454 FAM168BA1KXE4 195 aa3.65□□□□□ -1.83
CDH13-213ENST00000569454 CCDC179H3BU77 68 aa3.65□□□□□ -1.83
CDH13-213ENST00000569454 CRYGAP11844 174 aa3.65□□□□□ -1.83
CDH13-213ENST00000569454 HAMPP81172 84 aa3.65□□□□□ -1.83
CDH13-213ENST00000569454 Q8N377 158 aa3.65□□□□□ -1.83
CDH13-213ENST00000569454 Q9BRP9 147 aa3.65□□□□□ -1.83
CDH13-213ENST00000569454 NREPQ16612 68 aa3.64□□□□□ -1.83
CDH13-213ENST00000569454 KRTAP7-1Q8IUC3 87 aa3.64□□□□□ -1.83
CDH13-213ENST00000569454 Q8NBF4 154 aa3.64□□□□□ -1.83
CDH13-213ENST00000569454 CRCT1Q9UGL9 99 aa3.64□□□□□ -1.83
CDH13-213ENST00000569454 CSMD3Q7Z407 3707 aa3.63□□□□□ -1.83
CDH13-213ENST00000569454 A0A087WVE0 104 aa3.63□□□□□ -1.83
CDH13-213ENST00000569454 IGKV2-24A0A0C4DH68 120 aa3.63□□□□□ -1.83
CDH13-213ENST00000569454 LRCOL1A6NCL2 159 aa3.63□□□□□ -1.83
CDH13-213ENST00000569454 C1orf137Q5JT78 98 aa3.63□□□□□ -1.83
CDH13-213ENST00000569454 DEFB105AQ8NG35 78 aa3.63□□□□□ -1.83
CDH13-213ENST00000569454 SPRR4Q96PI1 79 aa3.63□□□□□ -1.83
CDH13-213ENST00000569454 LYSTQ99698 3801 aa3.63□□□□□ -1.83
CDH13-213ENST00000569454 DMBT1Q9UGM3 2413 aaPredicted RBP3.62□□□□□ -1.83
CDH13-213ENST00000569454 IGLV8-61A0A075B6I0 122 aa3.62□□□□□ -1.83
CDH13-213ENST00000569454 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.62□□□□□ -1.83
CDH13-213ENST00000569454 TRAV7A0A075B6U4 112 aa3.62□□□□□ -1.83
CDH13-213ENST00000569454 M0R2N4 97 aa3.62□□□□□ -1.83
CDH13-213ENST00000569454 HRCT1Q6UXD1 115 aa3.62□□□□□ -1.83
CDH13-213ENST00000569454 Q6ZRN7 208 aaPredicted RBP3.62□□□□□ -1.83
CDH13-213ENST00000569454 HUWE1Q7Z6Z7 4374 aaKnown RBP3.61□□□□□ -1.83
CDH13-213ENST00000569454 A0A1W2PNN7 141 aa3.61□□□□□ -1.83
CDH13-213ENST00000569454 BPY2O14599 106 aa3.61□□□□□ -1.83
CDH13-213ENST00000569454 SPRR1BP22528 89 aa3.61□□□□□ -1.83
CDH13-213ENST00000569454 TMEM258P61165 79 aa3.61□□□□□ -1.83
CDH13-213ENST00000569454 Q5XG85 94 aa3.61□□□□□ -1.83
CDH13-213ENST00000569454 EPM2AB3EWF7 344 aa3.6□□□□□ -1.83
CDH13-213ENST00000569454 A0A087WTM6 91 aa3.59□□□□□ -1.83
CDH13-213ENST00000569454 A0A1W2PNM2 257 aa3.59□□□□□ -1.83
CDH13-213ENST00000569454 C3orf84H3BNL1 204 aa3.59□□□□□ -1.83
CDH13-213ENST00000569454 ERC2-IT1O76042 136 aa3.59□□□□□ -1.83
CDH13-213ENST00000569454 PLA2G1BP04054 148 aaKnown RBP3.59□□□□□ -1.83
CDH13-213ENST00000569454 UBE2AP49459 152 aa3.59□□□□□ -1.83
CDH13-213ENST00000569454 PRLHP81277 87 aa3.59□□□□□ -1.83
CDH13-213ENST00000569454 Q6ZR54 194 aa3.59□□□□□ -1.83
CDH13-213ENST00000569454 SMIM29Q86T20 159 aa3.59□□□□□ -1.83
CDH13-213ENST00000569454 ST20-AS1Q8NBB2 130 aa3.59□□□□□ -1.83
CDH13-213ENST00000569454 SPACA4Q8TDM5 124 aa3.59□□□□□ -1.83
CDH13-213ENST00000569454 LINC00476Q8WZB0 136 aa3.59□□□□□ -1.83
CDH13-213ENST00000569454 HIGD2AQ9BW72 106 aa3.59□□□□□ -1.83
CDH13-213ENST00000569454 ZNF706Q9Y5V0 76 aaPredicted RBP3.59□□□□□ -1.83
CDH13-213ENST00000569454 NDUFC1O43677 76 aa3.58□□□□□ -1.84
CDH13-213ENST00000569454 IGKV4-1P06312 121 aa3.58□□□□□ -1.84
CDH13-213ENST00000569454 RPL37AP61513 92 aaKnown RBP3.58□□□□□ -1.84
CDH13-213ENST00000569454 PHF5AQ7RTV0 110 aaKnown RBP3.58□□□□□ -1.84
CDH13-213ENST00000569454 LCE6AA0A183 80 aa3.57□□□□□ -1.84
CDH13-213ENST00000569454 CHTF8P0CG12 524 aa3.57□□□□□ -1.84
CDH13-213ENST00000569454 ATP5EP56381 51 aaPredicted RBP3.57□□□□□ -1.84
CDH13-213ENST00000569454 KLKP1Q107X0 134 aa3.57□□□□□ -1.84
CDH13-213ENST00000569454 HMCN2Q8NDA2 5059 aa3.56□□□□□ -1.84
CDH13-213ENST00000569454 RTL8CO15255 209 aa3.56□□□□□ -1.84
CDH13-213ENST00000569454 C1orf134Q5TEV5 83 aa3.56□□□□□ -1.84
CDH13-213ENST00000569454 IGFL1Q6UW32 110 aa3.56□□□□□ -1.84
CDH13-213ENST00000569454 Q75L30 129 aa3.56□□□□□ -1.84
CDH13-213ENST00000569454 SCXQ7RTU7 201 aa3.56□□□□□ -1.84
CDH13-213ENST00000569454 KRTAP13-1Q8IUC0 172 aa3.56□□□□□ -1.84
CDH13-213ENST00000569454 C20orf197Q8N268 126 aa3.55□□□□□ -1.84
CDH13-213ENST00000569454 DPH3Q96FX2 82 aa3.55□□□□□ -1.84
CDH13-213ENST00000569454 WWC2-AS2Q96NR7 200 aa3.55□□□□□ -1.84
CDH13-213ENST00000569454 PLAC8Q9NZF1 115 aa3.55□□□□□ -1.84
CDH13-213ENST00000569454 DNAH9Q9NYC9 4486 aa3.55□□□□□ -1.84
CDH13-213ENST00000569454 A0A087WSZ3 146 aa3.53□□□□□ -1.84
CDH13-213ENST00000569454 IGLV5-52A0A0A0MRZ9 124 aa3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms