RNA–Protein interactions for RNA: ENST00000568454.5

TSC2-222, Transcript of TSC complex subunit 2, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TSC2, Length 5,434 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC2-222ENST00000568454 S4R3F8 94 aa10.08□□□□□ -0.8
TSC2-222ENST00000568454 KRTAP26-1Q6PEX3 210 aa10.05□□□□□ -0.8
TSC2-222ENST00000568454 ROMO1P60602 79 aa10.04□□□□□ -0.8
TSC2-222ENST00000568454 RPL37P61927 97 aaKnown RBP10.04□□□□□ -0.8
TSC2-222ENST00000568454 HECTD1Q9ULT8 2610 aa10.03□□□□□ -0.8
TSC2-222ENST00000568454 C5orf42Q9H799 3197 aa10.03□□□□□ -0.8
TSC2-222ENST00000568454 Q6ZR54 194 aa10.01□□□□□ -0.81
TSC2-222ENST00000568454 HTTP42858 3142 aa10.01□□□□□ -0.81
TSC2-222ENST00000568454 PCNTO95613 3336 aa9.99□□□□□ -0.81
TSC2-222ENST00000568454 FLNBO75369 2602 aaKnown RBP9.98□□□□□ -0.81
TSC2-222ENST00000568454 FLNAP21333 2647 aaKnown RBP9.98□□□□□ -0.81
TSC2-222ENST00000568454 KRTAP29-1A8MX34 341 aaPredicted RBP9.97□□□□□ -0.81
TSC2-222ENST00000568454 H1FX-AS1Q4G0G2 97 aa9.96□□□□□ -0.81
TSC2-222ENST00000568454 TRANK1O15050 2925 aa9.93□□□□□ -0.82
TSC2-222ENST00000568454 R4GN34 69 aa9.92□□□□□ -0.82
TSC2-222ENST00000568454 ITPR3Q14573 2671 aa9.91□□□□□ -0.82
TSC2-222ENST00000568454 KRTAP4-16G5E9R7 235 aaPredicted RBP9.89□□□□□ -0.83
TSC2-222ENST00000568454 SPATA8Q6RVD6 105 aa9.88□□□□□ -0.83
TSC2-222ENST00000568454 A6NN06 94 aa9.83□□□□□ -0.84
TSC2-222ENST00000568454 ATRQ13535 2644 aa9.83□□□□□ -0.84
TSC2-222ENST00000568454 KRTAP1-5Q9BYS1 174 aa9.83□□□□□ -0.84
TSC2-222ENST00000568454 RANBP2P49792 3224 aaKnown RBP9.8□□□□□ -0.84
TSC2-222ENST00000568454 HELZ2Q9BYK8 2649 aaKnown RBP9.78□□□□□ -0.84
TSC2-222ENST00000568454 LCE6AA0A183 80 aa9.76□□□□□ -0.85
TSC2-222ENST00000568454 M0R2T5 61 aa9.76□□□□□ -0.85
TSC2-222ENST00000568454 MAST4O15021 2626 aa9.75□□□□□ -0.85
TSC2-222ENST00000568454 M0QZ58 72 aa9.73□□□□□ -0.85
TSC2-222ENST00000568454 ZNF292O60281 2723 aa9.73□□□□□ -0.85
TSC2-222ENST00000568454 FLG2Q5D862 2391 aaPredicted RBP9.73□□□□□ -0.85
TSC2-222ENST00000568454 CFAP46Q8IYW2 2715 aa9.72□□□□□ -0.85
TSC2-222ENST00000568454 KRTAP16-1A8MUX0 517 aa9.72□□□□□ -0.85
TSC2-222ENST00000568454 KRTAP25-1Q3LHN0 102 aa9.71□□□□□ -0.86
TSC2-222ENST00000568454 CENPEQ02224 2701 aa9.7□□□□□ -0.86
TSC2-222ENST00000568454 SEC61BP60468 96 aaKnown RBP9.69□□□□□ -0.86
TSC2-222ENST00000568454 A0A0C4DFX4 3053 aa9.69□□□□□ -0.86
TSC2-222ENST00000568454 MGAQ8IWI9 3026 aa9.66□□□□□ -0.86
TSC2-222ENST00000568454 PANO1I0J062 215 aa9.65□□□□□ -0.86
TSC2-222ENST00000568454 CFAP54Q96N23 3096 aa9.64□□□□□ -0.87
TSC2-222ENST00000568454 ADM2Q7Z4H4 148 aa9.63□□□□□ -0.87
TSC2-222ENST00000568454 A0A087X002 238 aa9.62□□□□□ -0.87
TSC2-222ENST00000568454 NOTCH2NLQ7Z3S9 236 aa9.62□□□□□ -0.87
TSC2-222ENST00000568454 STAB1Q9NY15 2570 aa9.62□□□□□ -0.87
TSC2-222ENST00000568454 AKAP13Q12802 2813 aa9.62□□□□□ -0.87
TSC2-222ENST00000568454 KRTAP10-1P60331 282 aa9.61□□□□□ -0.87
TSC2-222ENST00000568454 MKI67P46013 3256 aaKnown RBP9.61□□□□□ -0.87
TSC2-222ENST00000568454 NBEAL1Q6ZS30 2694 aa9.61□□□□□ -0.87
TSC2-222ENST00000568454 LAMA3Q16787 3333 aa9.61□□□□□ -0.87
TSC2-222ENST00000568454 DMBT1Q9UGM3 2413 aaPredicted RBP9.59□□□□□ -0.87
TSC2-222ENST00000568454 KRTAP10-2P60368 255 aa9.55□□□□□ -0.88
TSC2-222ENST00000568454 CHD6Q8TD26 2715 aa9.55□□□□□ -0.88
TSC2-222ENST00000568454 LAMA2P24043 3122 aaKnown RBP9.52□□□□□ -0.89
TSC2-222ENST00000568454 UNC79Q9P2D8 2635 aa9.51□□□□□ -0.89
TSC2-222ENST00000568454 A8MU10 97 aa9.51□□□□□ -0.89
TSC2-222ENST00000568454 Q5VSD8 79 aa9.51□□□□□ -0.89
TSC2-222ENST00000568454 RPS29P62273 56 aaKnown RBP9.47□□□□□ -0.89
TSC2-222ENST00000568454 GCN1Q92616 2671 aaKnown RBP9.46□□□□□ -0.9
TSC2-222ENST00000568454 WDFY4Q6ZS81 3184 aa9.46□□□□□ -0.9
TSC2-222ENST00000568454 PLAC4Q8WY50 150 aa9.45□□□□□ -0.9
TSC2-222ENST00000568454 BRCA2P51587 3418 aa9.44□□□□□ -0.9
TSC2-222ENST00000568454 KRTAP11-1Q8IUC1 163 aa9.44□□□□□ -0.9
TSC2-222ENST00000568454 NDUFAF8A1L188 74 aa9.44□□□□□ -0.9
TSC2-222ENST00000568454 KRTAP7-1Q8IUC3 87 aa9.42□□□□□ -0.9
TSC2-222ENST00000568454 NOTCH1P46531 2555 aa9.41□□□□□ -0.9
TSC2-222ENST00000568454 TEX15Q9BXT5 2789 aa9.38□□□□□ -0.91
TSC2-222ENST00000568454 KRTAP13-1Q8IUC0 172 aa9.36□□□□□ -0.91
TSC2-222ENST00000568454 PRUNE2Q8WUY3 3088 aa9.36□□□□□ -0.91
TSC2-222ENST00000568454 DSPP15924 2871 aaKnown RBP9.36□□□□□ -0.91
TSC2-222ENST00000568454 TRIOO75962 3097 aa9.35□□□□□ -0.91
TSC2-222ENST00000568454 IGSF10Q6WRI0 2623 aa9.34□□□□□ -0.91
TSC2-222ENST00000568454 UNC80Q8N2C7 3258 aa9.34□□□□□ -0.91
TSC2-222ENST00000568454 A8MUU9 505 aa9.33□□□□□ -0.92
TSC2-222ENST00000568454 Q6ZRN7 208 aaPredicted RBP9.3□□□□□ -0.92
TSC2-222ENST00000568454 C20orf166-AS1Q96NR2 134 aa9.3□□□□□ -0.92
TSC2-222ENST00000568454 VPS13AQ96RL7 3174 aa9.29□□□□□ -0.92
TSC2-222ENST00000568454 STAB2Q8WWQ8 2551 aa9.28□□□□□ -0.92
TSC2-222ENST00000568454 COL6A5A8TX70 2615 aa9.28□□□□□ -0.92
TSC2-222ENST00000568454 TEP1Q99973 2627 aaKnown RBP9.28□□□□□ -0.92
TSC2-222ENST00000568454 FRYQ5TBA9 3013 aa9.27□□□□□ -0.93
TSC2-222ENST00000568454 KRTAP13-2Q52LG2 175 aa9.26□□□□□ -0.93
TSC2-222ENST00000568454 SETXQ7Z333 2677 aaKnown RBP9.26□□□□□ -0.93
TSC2-222ENST00000568454 XIRP2A4UGR9 3374 aa9.23□□□□□ -0.93
TSC2-222ENST00000568454 MAP1AP78559 2803 aaPredicted RBP9.23□□□□□ -0.93
TSC2-222ENST00000568454 NBEAL2Q6ZNJ1 2754 aa9.22□□□□□ -0.93
TSC2-222ENST00000568454 CDH23Q9H251 3354 aa9.18□□□□□ -0.94
TSC2-222ENST00000568454 UBR5O95071 2799 aaPredicted RBP9.15□□□□□ -0.94
TSC2-222ENST00000568454 TNP1P09430 55 aa9.11□□□□□ -0.95
TSC2-222ENST00000568454 C10orf95Q9H7T3 257 aa9.05□□□□□ -0.96
TSC2-222ENST00000568454 ITPR1Q14643 2758 aa9.05□□□□□ -0.96
TSC2-222ENST00000568454 PP632Q6XCG6 107 aa9.04□□□□□ -0.96
TSC2-222ENST00000568454 LAMA1P25391 3075 aa9.04□□□□□ -0.96
TSC2-222ENST00000568454 NSD1Q96L73 2696 aaPredicted RBP9.03□□□□□ -0.96
TSC2-222ENST00000568454 FLNCQ14315 2725 aa9.03□□□□□ -0.96
TSC2-222ENST00000568454 KALRNO60229 2985 aa9.02□□□□□ -0.97
TSC2-222ENST00000568454 ITPR2Q14571 2701 aa9.01□□□□□ -0.97
TSC2-222ENST00000568454 CELSR3Q9NYQ7 3312 aa9□□□□□ -0.97
TSC2-222ENST00000568454 SZT2Q5T011 3432 aa8.99□□□□□ -0.97
TSC2-222ENST00000568454 ATMQ13315 3056 aa8.99□□□□□ -0.97
TSC2-222ENST00000568454 BAHCC1Q9P281 2608 aa8.99□□□□□ -0.97
TSC2-222ENST00000568454 NBEAQ8NFP9 2946 aa8.98□□□□□ -0.97
TSC2-222ENST00000568454 VCANP13611 3396 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms