RNA–Protein interactions for RNA: ENST00000568291.2

SF3B3-211, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 1,067 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-211ENST00000568291 TRBV7-6A0A0J9YX20 115 aa5.34□□□□□ -1.55
SF3B3-211ENST00000568291 LOC105371267A0A1B0GV96 52 aa5.34□□□□□ -1.55
SF3B3-211ENST00000568291 H7C2G1 150 aa5.34□□□□□ -1.55
SF3B3-211ENST00000568291 SMIM29Q86T20 159 aa5.34□□□□□ -1.55
SF3B3-211ENST00000568291 LAMTOR3Q9UHA4 124 aa5.34□□□□□ -1.55
SF3B3-211ENST00000568291 TEX49A0A1B0GTD5 131 aa5.33□□□□□ -1.56
SF3B3-211ENST00000568291 CTAG1AP78358 180 aa5.32□□□□□ -1.56
SF3B3-211ENST00000568291 C2orf91Q6ZV80 131 aa5.32□□□□□ -1.56
SF3B3-211ENST00000568291 VAMP8Q9BV40 100 aa5.32□□□□□ -1.56
SF3B3-211ENST00000568291 MUC17Q685J3 4493 aa5.31□□□□□ -1.56
SF3B3-211ENST00000568291 DLEU1O43261 78 aa5.31□□□□□ -1.56
SF3B3-211ENST00000568291 KRTAP13-3Q3SY46 172 aa5.31□□□□□ -1.56
SF3B3-211ENST00000568291 LINC00575Q6W349 94 aa5.31□□□□□ -1.56
SF3B3-211ENST00000568291 IGLV5-48A0A075B6I7 105 aa5.3□□□□□ -1.56
SF3B3-211ENST00000568291 SLC25A20O43772 301 aa5.3□□□□□ -1.56
SF3B3-211ENST00000568291 CFC1BP0CG36 223 aa5.3□□□□□ -1.56
SF3B3-211ENST00000568291 CFC1P0CG37 223 aa5.3□□□□□ -1.56
SF3B3-211ENST00000568291 VAMP3Q15836 100 aa5.3□□□□□ -1.56
SF3B3-211ENST00000568291 PYY3Q5JQD4 70 aa5.3□□□□□ -1.56
SF3B3-211ENST00000568291 LCE4AQ5TA78 99 aa5.3□□□□□ -1.56
SF3B3-211ENST00000568291 SLC25A34Q6PIV7 304 aa5.3□□□□□ -1.56
SF3B3-211ENST00000568291 Q6ZQY7 126 aa5.29□□□□□ -1.56
SF3B3-211ENST00000568291 FP248Q71RG6 208 aaPredicted RBP5.29□□□□□ -1.56
SF3B3-211ENST00000568291 hADV29S1A0JD25 119 aa5.28□□□□□ -1.56
SF3B3-211ENST00000568291 RAB37Q96AX2 223 aa5.28□□□□□ -1.56
SF3B3-211ENST00000568291 KRTAP4-9Q9BYQ8 210 aa5.28□□□□□ -1.56
SF3B3-211ENST00000568291 PRO1933Q9H354 126 aa5.28□□□□□ -1.56
SF3B3-211ENST00000568291 RPS29P62273 56 aaKnown RBP5.27□□□□□ -1.57
SF3B3-211ENST00000568291 NHP2Q9NX24 153 aaKnown RBP5.27□□□□□ -1.57
SF3B3-211ENST00000568291 HIGD1BQ9P298 99 aa5.27□□□□□ -1.57
SF3B3-211ENST00000568291 FXYD2P54710 66 aa5.26□□□□□ -1.57
SF3B3-211ENST00000568291 CEND1Q8N111 149 aa5.26□□□□□ -1.57
SF3B3-211ENST00000568291 FAM218AQ96MZ4 157 aa5.26□□□□□ -1.57
SF3B3-211ENST00000568291 C9orf92A6NGG3 77 aa5.25□□□□□ -1.57
SF3B3-211ENST00000568291 ASB16-AS1Q495Z4 193 aa5.24□□□□□ -1.57
SF3B3-211ENST00000568291 A0A0B4J2C4 111 aa5.23□□□□□ -1.57
SF3B3-211ENST00000568291 H3BUT2 72 aa5.23□□□□□ -1.57
SF3B3-211ENST00000568291 K7ERJ3 54 aa5.23□□□□□ -1.57
SF3B3-211ENST00000568291 BVES-AS1Q5T3Y7 98 aa5.23□□□□□ -1.57
SF3B3-211ENST00000568291 LIMD2Q9BT23 127 aa5.23□□□□□ -1.57
SF3B3-211ENST00000568291 KRTAP4-1Q9BYQ7 146 aa5.23□□□□□ -1.57
SF3B3-211ENST00000568291 F8WEM9 126 aa5.22□□□□□ -1.57
SF3B3-211ENST00000568291 CD164Q04900 197 aa5.22□□□□□ -1.57
SF3B3-211ENST00000568291 OCIAD2Q56VL3 154 aa5.22□□□□□ -1.57
SF3B3-211ENST00000568291 C1orf195Q5TG92 126 aa5.22□□□□□ -1.57
SF3B3-211ENST00000568291 SMIM6P0DI80 62 aa5.21□□□□□ -1.58
SF3B3-211ENST00000568291 SEC61BP60468 96 aaKnown RBP5.21□□□□□ -1.58
SF3B3-211ENST00000568291 KRTAP19-4Q3LI73 84 aa5.21□□□□□ -1.58
SF3B3-211ENST00000568291 IGFL1Q6UW32 110 aa5.21□□□□□ -1.58
SF3B3-211ENST00000568291 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.21□□□□□ -1.58
SF3B3-211ENST00000568291 SNHG12Q9BXW3 62 aa5.21□□□□□ -1.58
SF3B3-211ENST00000568291 PRO1854Q9UHT4 67 aa5.21□□□□□ -1.58
SF3B3-211ENST00000568291 TRIAP1O43715 76 aa5.19□□□□□ -1.58
SF3B3-211ENST00000568291 CLEC2BQ92478 149 aa5.19□□□□□ -1.58
SF3B3-211ENST00000568291 H0YGX0 51 aa5.18□□□□□ -1.58
SF3B3-211ENST00000568291 HSD52Q0P140 79 aa5.18□□□□□ -1.58
SF3B3-211ENST00000568291 IGLV8-61A0A075B6I0 122 aa5.17□□□□□ -1.58
SF3B3-211ENST00000568291 A0A1B0GV72 72 aa5.17□□□□□ -1.58
SF3B3-211ENST00000568291 KRTAP9-7A8MTY7 169 aa5.17□□□□□ -1.58
SF3B3-211ENST00000568291 UQCR10Q9UDW1 63 aa5.17□□□□□ -1.58
SF3B3-211ENST00000568291 TRBV7-7A0A0K0K1E9 115 aa5.16□□□□□ -1.58
SF3B3-211ENST00000568291 FABP2P12104 132 aa5.16□□□□□ -1.58
SF3B3-211ENST00000568291 PSMB2P49721 201 aa5.16□□□□□ -1.58
SF3B3-211ENST00000568291 NDUFV3P56181 108 aaKnown RBP5.16□□□□□ -1.58
SF3B3-211ENST00000568291 Q5XG85 94 aa5.16□□□□□ -1.58
SF3B3-211ENST00000568291 Q6JHZ5 121 aa5.16□□□□□ -1.58
SF3B3-211ENST00000568291 KRTAP4-2Q9BYR5 136 aa5.16□□□□□ -1.58
SF3B3-211ENST00000568291 TCL1BO95988 128 aa5.15□□□□□ -1.59
SF3B3-211ENST00000568291 PCOTHQ58A44 107 aa5.15□□□□□ -1.59
SF3B3-211ENST00000568291 SNCGO76070 127 aa5.14□□□□□ -1.59
SF3B3-211ENST00000568291 H3BMG7 143 aa5.13□□□□□ -1.59
SF3B3-211ENST00000568291 PPDPFLQ8WWR9 84 aa5.13□□□□□ -1.59
SF3B3-211ENST00000568291 CRCT1Q9UGL9 99 aa5.13□□□□□ -1.59
SF3B3-211ENST00000568291 NAA38Q9BRA0 125 aaKnown RBP5.11□□□□□ -1.59
SF3B3-211ENST00000568291 SCGB1C2P0DMR2 95 aa5.1□□□□□ -1.59
SF3B3-211ENST00000568291 A0A087WSZ3 146 aa5.09□□□□□ -1.59
SF3B3-211ENST00000568291 A0A1B0GX51 115 aa5.09□□□□□ -1.59
SF3B3-211ENST00000568291 A0A1W2PNM2 257 aa5.09□□□□□ -1.59
SF3B3-211ENST00000568291 LST1O00453 97 aa5.09□□□□□ -1.59
SF3B3-211ENST00000568291 OBSCN-AS1Q96MR7 158 aa5.09□□□□□ -1.59
SF3B3-211ENST00000568291 KRTAP4-11Q9BYQ6 195 aa5.09□□□□□ -1.59
SF3B3-211ENST00000568291 ORMDL1Q9P0S3 153 aa5.09□□□□□ -1.59
SF3B3-211ENST00000568291 DNAL4O96015 105 aa5.08□□□□□ -1.6
SF3B3-211ENST00000568291 COX6CP09669 75 aa5.08□□□□□ -1.6
SF3B3-211ENST00000568291 TEN1Q86WV5 123 aa5.08□□□□□ -1.6
SF3B3-211ENST00000568291 MT1HP80294 61 aa5.07□□□□□ -1.6
SF3B3-211ENST00000568291 KRTAP19-2Q3LHN2 52 aa5.07□□□□□ -1.6
SF3B3-211ENST00000568291 RPL37P61927 97 aaKnown RBP5.06□□□□□ -1.6
SF3B3-211ENST00000568291 DEFB116Q30KQ4 102 aa5.06□□□□□ -1.6
SF3B3-211ENST00000568291 ANKRD29Q8N6D5 301 aa5.06□□□□□ -1.6
SF3B3-211ENST00000568291 Q6Q795 121 aa5.05□□□□□ -1.6
SF3B3-211ENST00000568291 Q96NJ1 140 aa5.05□□□□□ -1.6
SF3B3-211ENST00000568291 FSIP2Q5CZC0 6907 aa5.03□□□□□ -1.6
SF3B3-211ENST00000568291 C9orf118A6NHY6 69 aa5.03□□□□□ -1.6
SF3B3-211ENST00000568291 TSTD3H0UI37 97 aa5.03□□□□□ -1.6
SF3B3-211ENST00000568291 TMEM256-PLSCR3K7ERE1 68 aa5.03□□□□□ -1.6
SF3B3-211ENST00000568291 TRACP01848 142 aa5.03□□□□□ -1.6
SF3B3-211ENST00000568291 DSCR10P59022 87 aa5.03□□□□□ -1.6
SF3B3-211ENST00000568291 BATFQ16520 125 aa5.03□□□□□ -1.6
SF3B3-211ENST00000568291 VPS25Q9BRG1 176 aa5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms