RNA–Protein interactions for RNA: ENST00000568108.1

PTPN9-205, Transcript of protein tyrosine phosphatase, non-receptor type 9, humanhuman

TSL 2

Gene PTPN9, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9-205ENST00000568108 PLAC8Q9NZF1 115 aa4□□□□□ -1.77
PTPN9-205ENST00000568108 PRYO14603 147 aa3.99□□□□□ -1.77
PTPN9-205ENST00000568108 ELOF1P60002 83 aaKnown RBP3.99□□□□□ -1.77
PTPN9-205ENST00000568108 RBM3P98179 157 aaKnown RBP3.99□□□□□ -1.77
PTPN9-205ENST00000568108 SPACA4Q8TDM5 124 aa3.99□□□□□ -1.77
PTPN9-205ENST00000568108 C7orf33Q8WU49 177 aa3.99□□□□□ -1.77
PTPN9-205ENST00000568108 DSCR8Q96T75 97 aa3.99□□□□□ -1.77
PTPN9-205ENST00000568108 LAMTOR3Q9UHA4 124 aa3.99□□□□□ -1.77
PTPN9-205ENST00000568108 C22orf24Q9Y442 160 aa3.99□□□□□ -1.77
PTPN9-205ENST00000568108 LRP2P98164 4655 aa3.99□□□□□ -1.77
PTPN9-205ENST00000568108 LOC110117498A0A087WWA1 95 aa3.98□□□□□ -1.77
PTPN9-205ENST00000568108 LOC107984640A0A0U1RRK4 108 aa3.98□□□□□ -1.77
PTPN9-205ENST00000568108 NDUFV3P56181 108 aaKnown RBP3.98□□□□□ -1.77
PTPN9-205ENST00000568108 Q6JHZ5 121 aa3.98□□□□□ -1.77
PTPN9-205ENST00000568108 UBL5Q9BZL1 73 aa3.98□□□□□ -1.77
PTPN9-205ENST00000568108 PKHD1L1Q86WI1 4243 aa3.97□□□□□ -1.77
PTPN9-205ENST00000568108 IGLV5-37A0A075B6J1 123 aa3.97□□□□□ -1.77
PTPN9-205ENST00000568108 Q6ZQY7 126 aa3.97□□□□□ -1.77
PTPN9-205ENST00000568108 Q6ZRP5 223 aa3.97□□□□□ -1.77
PTPN9-205ENST00000568108 Q8NDZ9 215 aa3.97□□□□□ -1.77
PTPN9-205ENST00000568108 DHRS4-AS1Q9P1J3 65 aa3.97□□□□□ -1.77
PTPN9-205ENST00000568108 IGKV2-24A0A0C4DH68 120 aa3.96□□□□□ -1.78
PTPN9-205ENST00000568108 KRTAP10-8P60410 259 aa3.96□□□□□ -1.78
PTPN9-205ENST00000568108 KCNQ1DNQ9H478 68 aa3.96□□□□□ -1.78
PTPN9-205ENST00000568108 C9orf129Q5T035 196 aaKnown RBP3.95□□□□□ -1.78
PTPN9-205ENST00000568108 REG3GQ6UW15 175 aa3.95□□□□□ -1.78
PTPN9-205ENST00000568108 SPINK6Q6UWN8 80 aa3.95□□□□□ -1.78
PTPN9-205ENST00000568108 SMCR5Q8TEV8 140 aa3.95□□□□□ -1.78
PTPN9-205ENST00000568108 FAM236AA0A1B0GUQ0 79 aa3.94□□□□□ -1.78
PTPN9-205ENST00000568108 FAM236BA0A1B0GV22 79 aa3.94□□□□□ -1.78
PTPN9-205ENST00000568108 ETDCA0A1B0GVM5 59 aa3.94□□□□□ -1.78
PTPN9-205ENST00000568108 ATOX1O00244 68 aa3.94□□□□□ -1.78
PTPN9-205ENST00000568108 KRTAP19-4Q3LI73 84 aa3.94□□□□□ -1.78
PTPN9-205ENST00000568108 Q6ZQT0 140 aa3.94□□□□□ -1.78
PTPN9-205ENST00000568108 LINC00846Q9NV44 126 aa3.94□□□□□ -1.78
PTPN9-205ENST00000568108 A0A096LNI7 61 aa3.93□□□□□ -1.78
PTPN9-205ENST00000568108 A0A1B0GW54 56 aa3.93□□□□□ -1.78
PTPN9-205ENST00000568108 MRPL55Q7Z7F7 128 aaKnown RBP3.93□□□□□ -1.78
PTPN9-205ENST00000568108 LINC00474Q9P2X8 69 aa3.93□□□□□ -1.78
PTPN9-205ENST00000568108 TNXBP22105 4242 aa3.93□□□□□ -1.78
PTPN9-205ENST00000568108 IGLV1-50A0A075B6I6 118 aa3.92□□□□□ -1.78
PTPN9-205ENST00000568108 Q6ZRX8 168 aa3.92□□□□□ -1.78
PTPN9-205ENST00000568108 RNF213Q63HN8 5207 aa3.91□□□□□ -1.78
PTPN9-205ENST00000568108 TRBV7-4A0A0J9YYF1 115 aa3.91□□□□□ -1.78
PTPN9-205ENST00000568108 SPRR1AP35321 89 aa3.91□□□□□ -1.78
PTPN9-205ENST00000568108 CXCL6P80162 114 aa3.91□□□□□ -1.78
PTPN9-205ENST00000568108 FAM19A5Q7Z5A7 132 aaPredicted RBP3.91□□□□□ -1.78
PTPN9-205ENST00000568108 IGKV3D-7A0A0C4DH55 119 aa3.9□□□□□ -1.79
PTPN9-205ENST00000568108 HIST1H4AP62805 103 aaKnown RBP3.9□□□□□ -1.79
PTPN9-205ENST00000568108 F8WEM9 126 aa3.89□□□□□ -1.79
PTPN9-205ENST00000568108 UQCRQO14949 82 aa3.89□□□□□ -1.79
PTPN9-205ENST00000568108 UBE2BP63146 152 aa3.89□□□□□ -1.79
PTPN9-205ENST00000568108 SMIM20Q8N5G0 67 aa3.89□□□□□ -1.79
PTPN9-205ENST00000568108 IGLV5-48A0A075B6I7 105 aa3.88□□□□□ -1.79
PTPN9-205ENST00000568108 RPL37AP8A6NKH3 93 aa3.88□□□□□ -1.79
PTPN9-205ENST00000568108 KRTAP4-16G5E9R7 235 aaPredicted RBP3.88□□□□□ -1.79
PTPN9-205ENST00000568108 BCE1O60756 84 aa3.88□□□□□ -1.79
PTPN9-205ENST00000568108 Q6ZVQ6 151 aa3.88□□□□□ -1.79
PTPN9-205ENST00000568108 KRTAP3-1Q9BYR8 98 aa3.88□□□□□ -1.79
PTPN9-205ENST00000568108 A0A0A0MQY5 61 aa3.87□□□□□ -1.79
PTPN9-205ENST00000568108 A0A1W2PNN7 141 aa3.87□□□□□ -1.79
PTPN9-205ENST00000568108 FAM168BA1KXE4 195 aa3.87□□□□□ -1.79
PTPN9-205ENST00000568108 COX7CP15954 63 aa3.87□□□□□ -1.79
PTPN9-205ENST00000568108 C9orf153Q5TBE3 101 aa3.87□□□□□ -1.79
PTPN9-205ENST00000568108 C3orf22Q8N5N4 141 aa3.87□□□□□ -1.79
PTPN9-205ENST00000568108 DEFB105AQ8NG35 78 aa3.87□□□□□ -1.79
PTPN9-205ENST00000568108 PSORS1C2Q9UIG4 136 aa3.87□□□□□ -1.79
PTPN9-205ENST00000568108 H0Y9J4 135 aa3.86□□□□□ -1.79
PTPN9-205ENST00000568108 LINC01547P58512 204 aaPredicted RBP3.86□□□□□ -1.79
PTPN9-205ENST00000568108 C1orf137Q5JT78 98 aa3.86□□□□□ -1.79
PTPN9-205ENST00000568108 Q8N377 158 aa3.86□□□□□ -1.79
PTPN9-205ENST00000568108 SERP2Q8N6R1 65 aa3.86□□□□□ -1.79
PTPN9-205ENST00000568108 CCDC179H3BU77 68 aa3.85□□□□□ -1.79
PTPN9-205ENST00000568108 NREPQ16612 68 aa3.85□□□□□ -1.79
PTPN9-205ENST00000568108 FAM19A1Q7Z5A9 133 aa3.85□□□□□ -1.79
PTPN9-205ENST00000568108 PRR26Q8N8Z3 221 aa3.85□□□□□ -1.79
PTPN9-205ENST00000568108 Q9BRP9 147 aa3.85□□□□□ -1.79
PTPN9-205ENST00000568108 LPAP08519 4548 aa3.84□□□□□ -1.79
PTPN9-205ENST00000568108 PHF5AQ7RTV0 110 aaKnown RBP3.84□□□□□ -1.79
PTPN9-205ENST00000568108 A0A087WVE0 104 aa3.83□□□□□ -1.8
PTPN9-205ENST00000568108 BPY2O14599 106 aa3.83□□□□□ -1.8
PTPN9-205ENST00000568108 IGLV7-43P04211 117 aa3.83□□□□□ -1.8
PTPN9-205ENST00000568108 CRYGAP11844 174 aa3.83□□□□□ -1.8
PTPN9-205ENST00000568108 KRTAP7-1Q8IUC3 87 aa3.83□□□□□ -1.8
PTPN9-205ENST00000568108 Q8NBF4 154 aa3.83□□□□□ -1.8
PTPN9-205ENST00000568108 TRAV7A0A075B6U4 112 aa3.82□□□□□ -1.8
PTPN9-205ENST00000568108 UBE2AP49459 152 aa3.82□□□□□ -1.8
PTPN9-205ENST00000568108 PRR4Q16378 134 aa3.82□□□□□ -1.8
PTPN9-205ENST00000568108 IGLV8-61A0A075B6I0 122 aa3.81□□□□□ -1.8
PTPN9-205ENST00000568108 A0A0U1RQV1 116 aa3.81□□□□□ -1.8
PTPN9-205ENST00000568108 KRTAP11-1Q8IUC1 163 aa3.81□□□□□ -1.8
PTPN9-205ENST00000568108 ST20-AS1Q8NBB2 130 aa3.81□□□□□ -1.8
PTPN9-205ENST00000568108 SPRR4Q96PI1 79 aa3.81□□□□□ -1.8
PTPN9-205ENST00000568108 HIGD2AQ9BW72 106 aa3.81□□□□□ -1.8
PTPN9-205ENST00000568108 ZNF706Q9Y5V0 76 aaPredicted RBP3.81□□□□□ -1.8
PTPN9-205ENST00000568108 KRTAP1-4P0C5Y4 121 aa3.8□□□□□ -1.8
PTPN9-205ENST00000568108 SPRR1BP22528 89 aa3.8□□□□□ -1.8
PTPN9-205ENST00000568108 TMEM258P61165 79 aa3.8□□□□□ -1.8
PTPN9-205ENST00000568108 PRLHP81277 87 aa3.8□□□□□ -1.8
PTPN9-205ENST00000568108 XP32Q5T750 250 aa3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms