RNA–Protein interactions for RNA: ENST00000567843.1

GTF3C1-208, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 3

Gene GTF3C1, Length 474 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-208ENST00000567843 S100A6P06703 90 aa6.56□□□□□ -1.36
GTF3C1-208ENST00000567843 TCL1BO95988 128 aa6.55□□□□□ -1.36
GTF3C1-208ENST00000567843 HIST1H4GQ99525 98 aa6.55□□□□□ -1.36
GTF3C1-208ENST00000567843 FSIP2Q5CZC0 6907 aa6.55□□□□□ -1.36
GTF3C1-208ENST00000567843 RPL37P61927 97 aaKnown RBP6.53□□□□□ -1.36
GTF3C1-208ENST00000567843 MT1HP80294 61 aa6.53□□□□□ -1.36
GTF3C1-208ENST00000567843 IGFL1Q6UW32 110 aa6.53□□□□□ -1.36
GTF3C1-208ENST00000567843 OCIAD2Q56VL3 154 aa6.52□□□□□ -1.37
GTF3C1-208ENST00000567843 H3BUT2 72 aa6.51□□□□□ -1.37
GTF3C1-208ENST00000567843 TRBV7-7A0A0K0K1E9 115 aa6.5□□□□□ -1.37
GTF3C1-208ENST00000567843 COX8AP10176 69 aa6.5□□□□□ -1.37
GTF3C1-208ENST00000567843 S100A1P23297 94 aa6.5□□□□□ -1.37
GTF3C1-208ENST00000567843 Q6JHZ5 121 aa6.5□□□□□ -1.37
GTF3C1-208ENST00000567843 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.5□□□□□ -1.37
GTF3C1-208ENST00000567843 CLEC2BQ92478 149 aa6.5□□□□□ -1.37
GTF3C1-208ENST00000567843 C14orf144Q96I85 54 aa6.5□□□□□ -1.37
GTF3C1-208ENST00000567843 SNHG12Q9BXW3 62 aa6.5□□□□□ -1.37
GTF3C1-208ENST00000567843 BVES-AS1Q5T3Y7 98 aa6.48□□□□□ -1.37
GTF3C1-208ENST00000567843 LCE2DQ5TA82 110 aaPredicted RBP6.48□□□□□ -1.37
GTF3C1-208ENST00000567843 CFC1BP0CG36 223 aa6.47□□□□□ -1.37
GTF3C1-208ENST00000567843 CFC1P0CG37 223 aa6.47□□□□□ -1.37
GTF3C1-208ENST00000567843 PAM16Q9Y3D7 125 aa6.47□□□□□ -1.37
GTF3C1-208ENST00000567843 COX6B2Q6YFQ2 88 aa6.46□□□□□ -1.38
GTF3C1-208ENST00000567843 RAB37Q96AX2 223 aa6.46□□□□□ -1.38
GTF3C1-208ENST00000567843 OBSCN-AS1Q96MR7 158 aa6.46□□□□□ -1.38
GTF3C1-208ENST00000567843 DLEU1O43261 78 aa6.45□□□□□ -1.38
GTF3C1-208ENST00000567843 FAM218AQ96MZ4 157 aa6.45□□□□□ -1.38
GTF3C1-208ENST00000567843 M0R2T5 61 aa6.44□□□□□ -1.38
GTF3C1-208ENST00000567843 SPATA45Q537H7 98 aa6.44□□□□□ -1.38
GTF3C1-208ENST00000567843 LST1O00453 97 aa6.43□□□□□ -1.38
GTF3C1-208ENST00000567843 C2orf91Q6ZV80 131 aa6.42□□□□□ -1.38
GTF3C1-208ENST00000567843 PPDPFLQ8WWR9 84 aa6.42□□□□□ -1.38
GTF3C1-208ENST00000567843 NDUFV3P56181 108 aaKnown RBP6.41□□□□□ -1.38
GTF3C1-208ENST00000567843 KRTAP10-6P60371 365 aaPredicted RBP6.41□□□□□ -1.38
GTF3C1-208ENST00000567843 Q6Q795 121 aa6.41□□□□□ -1.38
GTF3C1-208ENST00000567843 HIGD1BQ9P298 99 aa6.41□□□□□ -1.38
GTF3C1-208ENST00000567843 FLGP20930 4061 aaPredicted RBP6.41□□□□□ -1.38
GTF3C1-208ENST00000567843 A0A0B4J2C4 111 aa6.4□□□□□ -1.38
GTF3C1-208ENST00000567843 LORP23490 312 aaPredicted RBP6.4□□□□□ -1.38
GTF3C1-208ENST00000567843 ATP11AUNQ6ZP68 121 aa6.4□□□□□ -1.38
GTF3C1-208ENST00000567843 Q96NJ1 140 aa6.4□□□□□ -1.38
GTF3C1-208ENST00000567843 VAMP8Q9BV40 100 aa6.4□□□□□ -1.38
GTF3C1-208ENST00000567843 CRCT1Q9UGL9 99 aa6.4□□□□□ -1.38
GTF3C1-208ENST00000567843 H0YGX0 51 aa6.39□□□□□ -1.39
GTF3C1-208ENST00000567843 FABP2P12104 132 aa6.39□□□□□ -1.39
GTF3C1-208ENST00000567843 A0A087WSZ3 146 aa6.38□□□□□ -1.39
GTF3C1-208ENST00000567843 SNCGO76070 127 aa6.38□□□□□ -1.39
GTF3C1-208ENST00000567843 CEND1Q8N111 149 aa6.38□□□□□ -1.39
GTF3C1-208ENST00000567843 H3BMG7 143 aa6.37□□□□□ -1.39
GTF3C1-208ENST00000567843 FXYD2P54710 66 aa6.37□□□□□ -1.39
GTF3C1-208ENST00000567843 Q75L30 129 aa6.37□□□□□ -1.39
GTF3C1-208ENST00000567843 PRO1854Q9UHT4 67 aa6.37□□□□□ -1.39
GTF3C1-208ENST00000567843 A0A1B0GV72 72 aa6.36□□□□□ -1.39
GTF3C1-208ENST00000567843 TEN1Q86WV5 123 aa6.36□□□□□ -1.39
GTF3C1-208ENST00000567843 SS18L2Q9UHA2 77 aa6.36□□□□□ -1.39
GTF3C1-208ENST00000567843 TRIAP1O43715 76 aa6.34□□□□□ -1.39
GTF3C1-208ENST00000567843 A0A1W2PNM2 257 aa6.33□□□□□ -1.4
GTF3C1-208ENST00000567843 K7ERJ3 54 aa6.33□□□□□ -1.4
GTF3C1-208ENST00000567843 DSCR10P59022 87 aa6.33□□□□□ -1.4
GTF3C1-208ENST00000567843 TMEM238LA0A1B0GVL6 79 aa6.32□□□□□ -1.4
GTF3C1-208ENST00000567843 A6NJY4 79 aa6.32□□□□□ -1.4
GTF3C1-208ENST00000567843 SIGMAR1Q99720 223 aa6.31□□□□□ -1.4
GTF3C1-208ENST00000567843 A0A1B0GX51 115 aa6.3□□□□□ -1.4
GTF3C1-208ENST00000567843 PSMB2P49721 201 aa6.3□□□□□ -1.4
GTF3C1-208ENST00000567843 C20orf166-AS1Q96NR2 134 aa6.3□□□□□ -1.4
GTF3C1-208ENST00000567843 A8MUU9 505 aa6.29□□□□□ -1.4
GTF3C1-208ENST00000567843 GHRHP01286 108 aa6.28□□□□□ -1.4
GTF3C1-208ENST00000567843 DEFB116Q30KQ4 102 aa6.28□□□□□ -1.4
GTF3C1-208ENST00000567843 PYY3Q5JQD4 70 aa6.28□□□□□ -1.4
GTF3C1-208ENST00000567843 ANKRD29Q8N6D5 301 aa6.28□□□□□ -1.4
GTF3C1-208ENST00000567843 DNAL4O96015 105 aa6.27□□□□□ -1.41
GTF3C1-208ENST00000567843 HSD52Q0P140 79 aa6.27□□□□□ -1.41
GTF3C1-208ENST00000567843 ORMDL1Q9P0S3 153 aa6.27□□□□□ -1.41
GTF3C1-208ENST00000567843 IGKV4-1P06312 121 aa6.26□□□□□ -1.41
GTF3C1-208ENST00000567843 NOTCH2NLQ7Z3S9 236 aa6.25□□□□□ -1.41
GTF3C1-208ENST00000567843 KRTAP16-1A8MUX0 517 aa6.24□□□□□ -1.41
GTF3C1-208ENST00000567843 LINC00313P59037 77 aa6.24□□□□□ -1.41
GTF3C1-208ENST00000567843 TRBV20-1A0A075B6N2 111 aa6.22□□□□□ -1.41
GTF3C1-208ENST00000567843 TRBV7-4A0A0J9YYF1 115 aa6.22□□□□□ -1.41
GTF3C1-208ENST00000567843 COX6CP09669 75 aa6.22□□□□□ -1.41
GTF3C1-208ENST00000567843 VPS25Q9BRG1 176 aa6.22□□□□□ -1.41
GTF3C1-208ENST00000567843 TMA7Q9Y2S6 64 aaKnown RBP6.22□□□□□ -1.41
GTF3C1-208ENST00000567843 TMEM256-PLSCR3K7ERE1 68 aa6.21□□□□□ -1.42
GTF3C1-208ENST00000567843 TRACP01848 142 aa6.21□□□□□ -1.42
GTF3C1-208ENST00000567843 CCKP06307 115 aa6.21□□□□□ -1.42
GTF3C1-208ENST00000567843 IGHV6-1A0A0B4J1U7 121 aa6.2□□□□□ -1.42
GTF3C1-208ENST00000567843 USH2AO75445 5202 aa6.19□□□□□ -1.42
GTF3C1-208ENST00000567843 SCGB1C2P0DMR2 95 aa6.19□□□□□ -1.42
GTF3C1-208ENST00000567843 LINC00472Q9H8W2 130 aa6.19□□□□□ -1.42
GTF3C1-208ENST00000567843 UQCR10Q9UDW1 63 aa6.19□□□□□ -1.42
GTF3C1-208ENST00000567843 FAM236DA0A1B0GTK5 79 aa6.18□□□□□ -1.42
GTF3C1-208ENST00000567843 H3BQ85 93 aa6.18□□□□□ -1.42
GTF3C1-208ENST00000567843 FAM236CP0DP71 79 aa6.18□□□□□ -1.42
GTF3C1-208ENST00000567843 UBE2V1Q13404 147 aa6.17□□□□□ -1.42
GTF3C1-208ENST00000567843 KRTAP9-8Q9BYQ0 159 aa6.16□□□□□ -1.42
GTF3C1-208ENST00000567843 SSPOA2VEC9 5147 aa6.16□□□□□ -1.42
GTF3C1-208ENST00000567843 RBM3P98179 157 aaKnown RBP6.14□□□□□ -1.43
GTF3C1-208ENST00000567843 BAALC-AS2P0C853 105 aa6.13□□□□□ -1.43
GTF3C1-208ENST00000567843 HRES1P13985 223 aa6.13□□□□□ -1.43
GTF3C1-208ENST00000567843 DSCR8Q96T75 97 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms