RNA–Protein interactions for RNA: ENST00000567698.1

SHCBP1-206, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 2

Gene SHCBP1, Length 535 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-206ENST00000567698 KLK9Q2XQG4 91 aa0.72□□□□□ -2.29
SHCBP1-206ENST00000567698 H1FX-AS1Q4G0G2 97 aa0.72□□□□□ -2.29
SHCBP1-206ENST00000567698 WFDC10BQ8IUB3 73 aa0.72□□□□□ -2.29
SHCBP1-206ENST00000567698 RPL39LQ96EH5 51 aaKnown RBP0.72□□□□□ -2.29
SHCBP1-206ENST00000567698 AHCTF1Q8WYP5 2266 aa0.72□□□□□ -2.29
SHCBP1-206ENST00000567698 A8MTW9 85 aa0.71□□□□□ -2.3
SHCBP1-206ENST00000567698 RPS27P42677 84 aaKnown RBP0.71□□□□□ -2.3
SHCBP1-206ENST00000567698 H3BUX3 64 aa0.7□□□□□ -2.3
SHCBP1-206ENST00000567698 WFDC13Q8IUB5 93 aa0.7□□□□□ -2.3
SHCBP1-206ENST00000567698 URB1O60287 2271 aaKnown RBP0.69□□□□□ -2.3
SHCBP1-206ENST00000567698 ANK2Q01484 3957 aa0.69□□□□□ -2.3
SHCBP1-206ENST00000567698 DEFB130BP0DP73 79 aa0.69□□□□□ -2.3
SHCBP1-206ENST00000567698 DEFB130AP0DP74 79 aa0.69□□□□□ -2.3
SHCBP1-206ENST00000567698 SPRR1BP22528 89 aa0.69□□□□□ -2.3
SHCBP1-206ENST00000567698 DEFB106AQ8N104 65 aa0.69□□□□□ -2.3
SHCBP1-206ENST00000567698 KAAG1Q9UBP8 84 aa0.69□□□□□ -2.3
SHCBP1-206ENST00000567698 KRTAP2-3P0C7H8 128 aa0.68□□□□□ -2.3
SHCBP1-206ENST00000567698 SPRR1AP35321 89 aa0.68□□□□□ -2.3
SHCBP1-206ENST00000567698 DEFB105AQ8NG35 78 aa0.68□□□□□ -2.3
SHCBP1-206ENST00000567698 KRTAP2-4Q9BYR9 128 aa0.68□□□□□ -2.3
SHCBP1-206ENST00000567698 KRTAP2-1Q9BYU5 128 aa0.68□□□□□ -2.3
SHCBP1-206ENST00000567698 TOMM7Q9P0U1 55 aa0.68□□□□□ -2.3
SHCBP1-206ENST00000567698 CACNA1HO95180 2353 aa0.68□□□□□ -2.3
SHCBP1-206ENST00000567698 TPRP12270 2363 aaKnown RBP0.68□□□□□ -2.3
SHCBP1-206ENST00000567698 GOLGA4Q13439 2230 aaKnown RBP0.67□□□□□ -2.3
SHCBP1-206ENST00000567698 H3BSH0 61 aa0.67□□□□□ -2.3
SHCBP1-206ENST00000567698 CLPSL2Q6UWE3 100 aa0.67□□□□□ -2.3
SHCBP1-206ENST00000567698 Q9Y3F1 56 aa0.67□□□□□ -2.3
SHCBP1-206ENST00000567698 M0QZ58 72 aa0.66□□□□□ -2.3
SHCBP1-206ENST00000567698 USF3Q68DE3 2245 aa0.66□□□□□ -2.3
SHCBP1-206ENST00000567698 PLCE1Q9P212 2302 aa0.66□□□□□ -2.3
SHCBP1-206ENST00000567698 PIEZO2Q9H5I5 2752 aa0.65□□□□□ -2.3
SHCBP1-206ENST00000567698 PRLHP81277 87 aa0.65□□□□□ -2.31
SHCBP1-206ENST00000567698 RPL39P5Q59GN2 51 aa0.65□□□□□ -2.31
SHCBP1-206ENST00000567698 LEAP2Q969E1 77 aa0.65□□□□□ -2.31
SHCBP1-206ENST00000567698 S4R3F8 94 aa0.65□□□□□ -2.31
SHCBP1-206ENST00000567698 CELSR2Q9HCU4 2923 aa0.65□□□□□ -2.31
SHCBP1-206ENST00000567698 TTC28Q96AY4 2481 aa0.65□□□□□ -2.31
SHCBP1-206ENST00000567698 TNCP24821 2201 aa0.65□□□□□ -2.31
SHCBP1-206ENST00000567698 LELP1Q5T871 98 aa0.64□□□□□ -2.31
SHCBP1-206ENST00000567698 APLNQ9ULZ1 77 aa0.64□□□□□ -2.31
SHCBP1-206ENST00000567698 CACNA1EQ15878 2313 aa0.64□□□□□ -2.31
SHCBP1-206ENST00000567698 BPTFQ12830 3046 aa0.63□□□□□ -2.31
SHCBP1-206ENST00000567698 C2CD3Q4AC94 2353 aa0.62□□□□□ -2.31
SHCBP1-206ENST00000567698 DOPEY2Q9Y3R5 2298 aa0.62□□□□□ -2.31
SHCBP1-206ENST00000567698 CHD9Q3L8U1 2897 aa0.62□□□□□ -2.31
SHCBP1-206ENST00000567698 H0YGG7 62 aa0.62□□□□□ -2.31
SHCBP1-206ENST00000567698 COX14Q96I36 57 aa0.62□□□□□ -2.31
SHCBP1-206ENST00000567698 POLQO75417 2590 aa0.61□□□□□ -2.31
SHCBP1-206ENST00000567698 C9orf92A6NGG3 77 aa0.61□□□□□ -2.31
SHCBP1-206ENST00000567698 DEFB108AA8MXU0 73 aa0.61□□□□□ -2.31
SHCBP1-206ENST00000567698 RHPN1-AS1Q9BWJ2 59 aa0.61□□□□□ -2.31
SHCBP1-206ENST00000567698 DEFB124Q8NES8 71 aa0.6□□□□□ -2.31
SHCBP1-206ENST00000567698 ALMS1Q8TCU4 4167 aa0.6□□□□□ -2.31
SHCBP1-206ENST00000567698 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP0.6□□□□□ -2.314e-8■■■■■ 30.4
SHCBP1-206ENST00000567698 NCOR2Q9Y618 2525 aa0.6□□□□□ -2.31
SHCBP1-206ENST00000567698 PTPRZ1P23471 2315 aaPredicted RBP0.59□□□□□ -2.31
SHCBP1-206ENST00000567698 H3BNG1 76 aa0.59□□□□□ -2.31
SHCBP1-206ENST00000567698 TNP1P09430 55 aa0.59□□□□□ -2.31
SHCBP1-206ENST00000567698 ZNF292O60281 2723 aa0.59□□□□□ -2.32
SHCBP1-206ENST00000567698 PDE4DIPQ5VU43 2346 aa0.59□□□□□ -2.32
SHCBP1-206ENST00000567698 CSMD3Q7Z407 3707 aa0.59□□□□□ -2.32
SHCBP1-206ENST00000567698 CNOT1A5YKK6 2376 aaKnown RBP0.59□□□□□ -2.32
SHCBP1-206ENST00000567698 WNK2Q9Y3S1 2297 aa0.58□□□□□ -2.32
SHCBP1-206ENST00000567698 PTPRQQ9UMZ3 2332 aa0.58□□□□□ -2.32
SHCBP1-206ENST00000567698 RPS29P62273 56 aaKnown RBP0.58□□□□□ -2.32
SHCBP1-206ENST00000567698 SMR3AQ99954 134 aa0.58□□□□□ -2.32
SHCBP1-206ENST00000567698 APCP25054 2843 aa0.58□□□□□ -2.32
SHCBP1-206ENST00000567698 SPINK1P00995 79 aa0.57□□□□□ -2.32
SHCBP1-206ENST00000567698 SPINK6Q6UWN8 80 aa0.57□□□□□ -2.32
SHCBP1-206ENST00000567698 DEFB135Q30KP9 77 aa0.56□□□□□ -2.32
SHCBP1-206ENST00000567698 WNK1Q9H4A3 2382 aa0.56□□□□□ -2.32
SHCBP1-206ENST00000567698 MUC5BQ9HC84 5762 aaPredicted RBP0.56□□□□□ -2.32
SHCBP1-206ENST00000567698 BDP1A6H8Y1 2624 aa0.55□□□□□ -2.32
SHCBP1-206ENST00000567698 SPTBN2O15020 2390 aa0.55□□□□□ -2.32
SHCBP1-206ENST00000567698 KRTAP21-1Q3LI58 79 aa0.55□□□□□ -2.32
SHCBP1-206ENST00000567698 ABCA12Q86UK0 2595 aa0.55□□□□□ -2.32
SHCBP1-206ENST00000567698 F8P00451 2351 aa0.54□□□□□ -2.32
SHCBP1-206ENST00000567698 TRANK1O15050 2925 aa0.54□□□□□ -2.32
SHCBP1-206ENST00000567698 M0R2T5 61 aa0.54□□□□□ -2.32
SHCBP1-206ENST00000567698 SPART-AS1P0CW21 52 aa0.54□□□□□ -2.32
SHCBP1-206ENST00000567698 LINC01556Q5JQF7 62 aa0.54□□□□□ -2.32
SHCBP1-206ENST00000567698 AHNAKQ09666 5890 aaKnown RBP0.54□□□□□ -2.32
SHCBP1-206ENST00000567698 KNL1Q8NG31 2342 aa0.54□□□□□ -2.32
SHCBP1-206ENST00000567698 CREBBPQ92793 2442 aa0.53□□□□□ -2.32
SHCBP1-206ENST00000567698 DEFB104AQ8WTQ1 72 aa0.53□□□□□ -2.32
SHCBP1-206ENST00000567698 APELAP0DMC3 54 aa0.52□□□□□ -2.33
SHCBP1-206ENST00000567698 HTN1P15515 57 aa0.52□□□□□ -2.33
SHCBP1-206ENST00000567698 A0A0C4DFX4 3053 aa0.52□□□□□ -2.33
SHCBP1-206ENST00000567698 BSNQ9UPA5 3926 aa0.52□□□□□ -2.33
SHCBP1-206ENST00000567698 ABCA2Q9BZC7 2435 aa0.52□□□□□ -2.33
SHCBP1-206ENST00000567698 HECTD1Q9ULT8 2610 aa0.51□□□□□ -2.33
SHCBP1-206ENST00000567698 IGF2RP11717 2491 aa0.51□□□□□ -2.33
SHCBP1-206ENST00000567698 CD52P31358 61 aa0.51□□□□□ -2.33
SHCBP1-206ENST00000567698 PRKDCP78527 4128 aaKnown RBP0.51□□□□□ -2.33
SHCBP1-206ENST00000567698 REV3LO60673 3130 aa0.51□□□□□ -2.33
SHCBP1-206ENST00000567698 VWFP04275 2813 aa0.51□□□□□ -2.33
SHCBP1-206ENST00000567698 AKAP13Q12802 2813 aa0.51□□□□□ -2.33
SHCBP1-206ENST00000567698 PCNX1Q96RV3 2341 aa0.5□□□□□ -2.33
SHCBP1-206ENST00000567698 PHGR1C9JFL3 82 aa0.5□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 104.4 ms