RNA–Protein interactions for RNA: ENST00000566292.5

USB1-213, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2

Gene USB1, Length 575 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-213ENST00000566292 hADV29S1A0JD25 119 aa9.77□□□□□ -0.85
USB1-213ENST00000566292 HSBP1L1C9JCN9 74 aa9.77□□□□□ -0.85
USB1-213ENST00000566292 IGFL1Q6UW32 110 aa9.74□□□□□ -0.85
USB1-213ENST00000566292 Q6JHZ5 121 aa9.73□□□□□ -0.85
USB1-213ENST00000566292 TRBV7-7A0A0K0K1E9 115 aa9.72□□□□□ -0.85
USB1-213ENST00000566292 CLEC2BQ92478 149 aa9.72□□□□□ -0.85
USB1-213ENST00000566292 C12orf57Q99622 126 aa9.72□□□□□ -0.85
USB1-213ENST00000566292 OCIAD2Q56VL3 154 aa9.71□□□□□ -0.86
USB1-213ENST00000566292 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.7□□□□□ -0.86
USB1-213ENST00000566292 CFC1BP0CG36 223 aa9.69□□□□□ -0.86
USB1-213ENST00000566292 HIST1H4GQ99525 98 aa9.69□□□□□ -0.86
USB1-213ENST00000566292 FLGP20930 4061 aaPredicted RBP9.68□□□□□ -0.86
USB1-213ENST00000566292 S100A6P06703 90 aa9.68□□□□□ -0.86
USB1-213ENST00000566292 FSIP2Q5CZC0 6907 aa9.68□□□□□ -0.86
USB1-213ENST00000566292 BVES-AS1Q5T3Y7 98 aa9.67□□□□□ -0.86
USB1-213ENST00000566292 SCGB1D1O95968 90 aa9.66□□□□□ -0.86
USB1-213ENST00000566292 COX8AP10176 69 aa9.66□□□□□ -0.86
USB1-213ENST00000566292 LORP23490 312 aaPredicted RBP9.66□□□□□ -0.86
USB1-213ENST00000566292 KRTAP10-6P60371 365 aaPredicted RBP9.66□□□□□ -0.86
USB1-213ENST00000566292 PPDPFLQ8WWR9 84 aa9.66□□□□□ -0.86
USB1-213ENST00000566292 CRCT1Q9UGL9 99 aa9.65□□□□□ -0.86
USB1-213ENST00000566292 H3BUT2 72 aa9.63□□□□□ -0.87
USB1-213ENST00000566292 SNHG12Q9BXW3 62 aa9.63□□□□□ -0.87
USB1-213ENST00000566292 S100A1P23297 94 aa9.62□□□□□ -0.87
USB1-213ENST00000566292 OBSCN-AS1Q96MR7 158 aa9.62□□□□□ -0.87
USB1-213ENST00000566292 DLEU1O43261 78 aa9.61□□□□□ -0.87
USB1-213ENST00000566292 CFC1P0CG37 223 aa9.61□□□□□ -0.87
USB1-213ENST00000566292 COX6B2Q6YFQ2 88 aa9.61□□□□□ -0.87
USB1-213ENST00000566292 M0R2T5 61 aa9.59□□□□□ -0.87
USB1-213ENST00000566292 Q75L30 129 aa9.58□□□□□ -0.88
USB1-213ENST00000566292 LST1O00453 97 aa9.57□□□□□ -0.88
USB1-213ENST00000566292 C14orf144Q96I85 54 aa9.57□□□□□ -0.88
USB1-213ENST00000566292 RAB37Q96AX2 223 aa9.56□□□□□ -0.88
USB1-213ENST00000566292 FAM218AQ96MZ4 157 aa9.56□□□□□ -0.88
USB1-213ENST00000566292 HIGD1BQ9P298 99 aa9.55□□□□□ -0.88
USB1-213ENST00000566292 A0A0B4J2C4 111 aa9.54□□□□□ -0.88
USB1-213ENST00000566292 Q6Q795 121 aa9.54□□□□□ -0.88
USB1-213ENST00000566292 ATP11AUNQ6ZP68 121 aa9.54□□□□□ -0.88
USB1-213ENST00000566292 H0YGX0 51 aa9.53□□□□□ -0.88
USB1-213ENST00000566292 PAM16Q9Y3D7 125 aa9.53□□□□□ -0.88
USB1-213ENST00000566292 NDUFV3P56181 108 aaKnown RBP9.52□□□□□ -0.89
USB1-213ENST00000566292 SPATA45Q537H7 98 aa9.52□□□□□ -0.89
USB1-213ENST00000566292 C2orf91Q6ZV80 131 aa9.52□□□□□ -0.89
USB1-213ENST00000566292 TEN1Q86WV5 123 aa9.51□□□□□ -0.89
USB1-213ENST00000566292 Q96NJ1 140 aa9.51□□□□□ -0.89
USB1-213ENST00000566292 SS18L2Q9UHA2 77 aa9.51□□□□□ -0.89
USB1-213ENST00000566292 SNCGO76070 127 aa9.5□□□□□ -0.89
USB1-213ENST00000566292 A0A087WSZ3 146 aa9.47□□□□□ -0.89
USB1-213ENST00000566292 C20orf166-AS1Q96NR2 134 aa9.47□□□□□ -0.89
USB1-213ENST00000566292 CEND1Q8N111 149 aa9.46□□□□□ -0.9
USB1-213ENST00000566292 VAMP8Q9BV40 100 aa9.46□□□□□ -0.9
USB1-213ENST00000566292 A0A1B0GX51 115 aa9.45□□□□□ -0.9
USB1-213ENST00000566292 A8MUU9 505 aa9.45□□□□□ -0.9
USB1-213ENST00000566292 H3BMG7 143 aa9.45□□□□□ -0.9
USB1-213ENST00000566292 PRO1854Q9UHT4 67 aa9.44□□□□□ -0.9
USB1-213ENST00000566292 FABP2P12104 132 aa9.43□□□□□ -0.9
USB1-213ENST00000566292 FXYD2P54710 66 aa9.43□□□□□ -0.9
USB1-213ENST00000566292 A0A1W2PNM2 257 aa9.41□□□□□ -0.9
USB1-213ENST00000566292 TRIAP1O43715 76 aa9.41□□□□□ -0.9
USB1-213ENST00000566292 TMEM238LA0A1B0GVL6 79 aa9.4□□□□□ -0.9
USB1-213ENST00000566292 A6NJY4 79 aa9.4□□□□□ -0.9
USB1-213ENST00000566292 GHRHP01286 108 aa9.39□□□□□ -0.91
USB1-213ENST00000566292 DSCR10P59022 87 aa9.39□□□□□ -0.91
USB1-213ENST00000566292 SIGMAR1Q99720 223 aa9.35□□□□□ -0.91
USB1-213ENST00000566292 A0A1B0GV72 72 aa9.32□□□□□ -0.92
USB1-213ENST00000566292 ANKRD29Q8N6D5 301 aa9.32□□□□□ -0.92
USB1-213ENST00000566292 ORMDL1Q9P0S3 153 aa9.32□□□□□ -0.92
USB1-213ENST00000566292 TRBV7-4A0A0J9YYF1 115 aa9.31□□□□□ -0.92
USB1-213ENST00000566292 KRTAP16-1A8MUX0 517 aa9.31□□□□□ -0.92
USB1-213ENST00000566292 K7ERJ3 54 aa9.3□□□□□ -0.92
USB1-213ENST00000566292 DNAL4O96015 105 aa9.3□□□□□ -0.92
USB1-213ENST00000566292 IGKV4-1P06312 121 aa9.3□□□□□ -0.92
USB1-213ENST00000566292 LINC00313P59037 77 aa9.3□□□□□ -0.92
USB1-213ENST00000566292 TRBV20-1A0A075B6N2 111 aa9.29□□□□□ -0.92
USB1-213ENST00000566292 HSD52Q0P140 79 aa9.29□□□□□ -0.92
USB1-213ENST00000566292 PSMB2P49721 201 aa9.28□□□□□ -0.92
USB1-213ENST00000566292 PYY3Q5JQD4 70 aa9.28□□□□□ -0.92
USB1-213ENST00000566292 NOTCH2NLQ7Z3S9 236 aa9.28□□□□□ -0.92
USB1-213ENST00000566292 KRTAP9-8Q9BYQ0 159 aa9.28□□□□□ -0.92
USB1-213ENST00000566292 H3BQ85 93 aa9.27□□□□□ -0.93
USB1-213ENST00000566292 TMEM256-PLSCR3K7ERE1 68 aa9.26□□□□□ -0.93
USB1-213ENST00000566292 DEFB116Q30KQ4 102 aa9.26□□□□□ -0.93
USB1-213ENST00000566292 LINC00472Q9H8W2 130 aa9.26□□□□□ -0.93
USB1-213ENST00000566292 CCKP06307 115 aa9.24□□□□□ -0.93
USB1-213ENST00000566292 COX6CP09669 75 aa9.23□□□□□ -0.93
USB1-213ENST00000566292 TRACP01848 142 aa9.21□□□□□ -0.94
USB1-213ENST00000566292 UBE2V1Q13404 147 aa9.21□□□□□ -0.94
USB1-213ENST00000566292 IGHV6-1A0A0B4J1U7 121 aa9.19□□□□□ -0.94
USB1-213ENST00000566292 MPLKIPQ8TAP9 179 aa9.19□□□□□ -0.94
USB1-213ENST00000566292 HRES1P13985 223 aa9.18□□□□□ -0.94
USB1-213ENST00000566292 FAM236DA0A1B0GTK5 79 aa9.17□□□□□ -0.94
USB1-213ENST00000566292 FAM236CP0DP71 79 aa9.17□□□□□ -0.94
USB1-213ENST00000566292 USH2AO75445 5202 aa9.17□□□□□ -0.94
USB1-213ENST00000566292 UQCR10Q9UDW1 63 aa9.16□□□□□ -0.94
USB1-213ENST00000566292 VPS25Q9BRG1 176 aa9.15□□□□□ -0.94
USB1-213ENST00000566292 A0A1B0GVX0 72 aa9.13□□□□□ -0.95
USB1-213ENST00000566292 MT2AP02795 61 aa9.13□□□□□ -0.95
USB1-213ENST00000566292 RBM3P98179 157 aaKnown RBP9.13□□□□□ -0.95
USB1-213ENST00000566292 RBM12B-AS1Q9P1G2 102 aa9.12□□□□□ -0.95
USB1-213ENST00000566292 C8orf87E5RJ46 101 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 86.7 ms