RNA–Protein interactions for RNA: ENST00000565511.5

RAB40C-209, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 783 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-209ENST00000565511 F8WEM9 126 aa12.57□□□□□ -0.4
RAB40C-209ENST00000565511 TCL1BO95988 128 aa12.57□□□□□ -0.4
RAB40C-209ENST00000565511 KRTAP10-6P60371 365 aaPredicted RBP12.56□□□□□ -0.4
RAB40C-209ENST00000565511 IGFL1Q6UW32 110 aa12.56□□□□□ -0.4
RAB40C-209ENST00000565511 hADV29S1A0JD25 119 aa12.55□□□□□ -0.4
RAB40C-209ENST00000565511 VAMP3Q15836 100 aa12.55□□□□□ -0.4
RAB40C-209ENST00000565511 C12orf57Q99622 126 aa12.55□□□□□ -0.4
RAB40C-209ENST00000565511 TRBV7-7A0A0K0K1E9 115 aa12.53□□□□□ -0.4
RAB40C-209ENST00000565511 CFC1BP0CG36 223 aa12.53□□□□□ -0.4
RAB40C-209ENST00000565511 CLEC2BQ92478 149 aa12.52□□□□□ -0.41
RAB40C-209ENST00000565511 S100A2P29034 98 aa12.51□□□□□ -0.41
RAB40C-209ENST00000565511 HSBP1L1C9JCN9 74 aa12.5□□□□□ -0.41
RAB40C-209ENST00000565511 Q6JHZ5 121 aa12.5□□□□□ -0.41
RAB40C-209ENST00000565511 OCIAD2Q56VL3 154 aa12.49□□□□□ -0.41
RAB40C-209ENST00000565511 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP12.46□□□□□ -0.41
RAB40C-209ENST00000565511 H3BUT2 72 aa12.45□□□□□ -0.42
RAB40C-209ENST00000565511 COX6B2Q6YFQ2 88 aa12.43□□□□□ -0.42
RAB40C-209ENST00000565511 OBSCN-AS1Q96MR7 158 aa12.43□□□□□ -0.42
RAB40C-209ENST00000565511 HIST1H4GQ99525 98 aa12.43□□□□□ -0.42
RAB40C-209ENST00000565511 M0R2T5 61 aa12.4□□□□□ -0.42
RAB40C-209ENST00000565511 COX8AP10176 69 aa12.4□□□□□ -0.42
RAB40C-209ENST00000565511 SCGB1D1O95968 90 aa12.38□□□□□ -0.43
RAB40C-209ENST00000565511 BVES-AS1Q5T3Y7 98 aa12.38□□□□□ -0.43
RAB40C-209ENST00000565511 PPDPFLQ8WWR9 84 aa12.37□□□□□ -0.43
RAB40C-209ENST00000565511 SNHG12Q9BXW3 62 aa12.37□□□□□ -0.43
RAB40C-209ENST00000565511 CFC1P0CG37 223 aa12.36□□□□□ -0.43
RAB40C-209ENST00000565511 Q75L30 129 aa12.36□□□□□ -0.43
RAB40C-209ENST00000565511 S100A6P06703 90 aa12.35□□□□□ -0.43
RAB40C-209ENST00000565511 FAM218AQ96MZ4 157 aa12.35□□□□□ -0.43
RAB40C-209ENST00000565511 DLEU1O43261 78 aa12.32□□□□□ -0.44
RAB40C-209ENST00000565511 LST1O00453 97 aa12.31□□□□□ -0.44
RAB40C-209ENST00000565511 C14orf144Q96I85 54 aa12.31□□□□□ -0.44
RAB40C-209ENST00000565511 ATP11AUNQ6ZP68 121 aa12.28□□□□□ -0.44
RAB40C-209ENST00000565511 Q6Q795 121 aa12.27□□□□□ -0.45
RAB40C-209ENST00000565511 C2orf91Q6ZV80 131 aa12.27□□□□□ -0.45
RAB40C-209ENST00000565511 Q96NJ1 140 aa12.27□□□□□ -0.45
RAB40C-209ENST00000565511 RAB37Q96AX2 223 aa12.26□□□□□ -0.45
RAB40C-209ENST00000565511 A0A0B4J2C4 111 aa12.25□□□□□ -0.45
RAB40C-209ENST00000565511 S100A1P23297 94 aa12.25□□□□□ -0.45
RAB40C-209ENST00000565511 NDUFV3P56181 108 aaKnown RBP12.24□□□□□ -0.45
RAB40C-209ENST00000565511 HIGD1BQ9P298 99 aa12.24□□□□□ -0.45
RAB40C-209ENST00000565511 PAM16Q9Y3D7 125 aa12.24□□□□□ -0.45
RAB40C-209ENST00000565511 SPATA45Q537H7 98 aa12.22□□□□□ -0.45
RAB40C-209ENST00000565511 C20orf166-AS1Q96NR2 134 aa12.22□□□□□ -0.45
RAB40C-209ENST00000565511 A0A087WSZ3 146 aa12.21□□□□□ -0.45
RAB40C-209ENST00000565511 TEN1Q86WV5 123 aa12.21□□□□□ -0.45
RAB40C-209ENST00000565511 A8MUU9 505 aa12.2□□□□□ -0.46
RAB40C-209ENST00000565511 H0YGX0 51 aa12.2□□□□□ -0.46
RAB40C-209ENST00000565511 SS18L2Q9UHA2 77 aa12.2□□□□□ -0.46
RAB40C-209ENST00000565511 A0A1W2PNM2 257 aa12.15□□□□□ -0.46
RAB40C-209ENST00000565511 H3BMG7 143 aa12.15□□□□□ -0.46
RAB40C-209ENST00000565511 DSCR10P59022 87 aa12.15□□□□□ -0.46
RAB40C-209ENST00000565511 CEND1Q8N111 149 aa12.15□□□□□ -0.46
RAB40C-209ENST00000565511 FXYD2P54710 66 aa12.14□□□□□ -0.47
RAB40C-209ENST00000565511 FABP2P12104 132 aa12.12□□□□□ -0.47
RAB40C-209ENST00000565511 VAMP8Q9BV40 100 aa12.12□□□□□ -0.47
RAB40C-209ENST00000565511 TRIAP1O43715 76 aa12.11□□□□□ -0.47
RAB40C-209ENST00000565511 PRO1854Q9UHT4 67 aa12.11□□□□□ -0.47
RAB40C-209ENST00000565511 SNCGO76070 127 aa12.1□□□□□ -0.47
RAB40C-209ENST00000565511 A0A1B0GX51 115 aa12.09□□□□□ -0.47
RAB40C-209ENST00000565511 KRTAP16-1A8MUX0 517 aa12.08□□□□□ -0.48
RAB40C-209ENST00000565511 SIGMAR1Q99720 223 aa12.07□□□□□ -0.48
RAB40C-209ENST00000565511 KRTAP9-8Q9BYQ0 159 aa12.07□□□□□ -0.48
RAB40C-209ENST00000565511 A0A1B0GV72 72 aa12.06□□□□□ -0.48
RAB40C-209ENST00000565511 NOTCH2NLQ7Z3S9 236 aa12.02□□□□□ -0.49
RAB40C-209ENST00000565511 USH2AO75445 5202 aa12.01□□□□□ -0.49
RAB40C-209ENST00000565511 TMEM238LA0A1B0GVL6 79 aa12.01□□□□□ -0.49
RAB40C-209ENST00000565511 A6NJY4 79 aa12.01□□□□□ -0.49
RAB40C-209ENST00000565511 K7ERJ3 54 aa12.01□□□□□ -0.49
RAB40C-209ENST00000565511 IGKV4-1P06312 121 aa11.98□□□□□ -0.49
RAB40C-209ENST00000565511 DEFB116Q30KQ4 102 aa11.97□□□□□ -0.49
RAB40C-209ENST00000565511 ANKRD29Q8N6D5 301 aa11.97□□□□□ -0.49
RAB40C-209ENST00000565511 SSPOA2VEC9 5147 aa11.97□□□□□ -0.49
RAB40C-209ENST00000565511 GHRHP01286 108 aa11.96□□□□□ -0.49
RAB40C-209ENST00000565511 TRBV20-1A0A075B6N2 111 aa11.95□□□□□ -0.5
RAB40C-209ENST00000565511 TRBV7-4A0A0J9YYF1 115 aa11.95□□□□□ -0.5
RAB40C-209ENST00000565511 LINC00313P59037 77 aa11.95□□□□□ -0.5
RAB40C-209ENST00000565511 ORMDL1Q9P0S3 153 aa11.95□□□□□ -0.5
RAB40C-209ENST00000565511 LINC00472Q9H8W2 130 aa11.93□□□□□ -0.5
RAB40C-209ENST00000565511 PYY3Q5JQD4 70 aa11.92□□□□□ -0.5
RAB40C-209ENST00000565511 DNAL4O96015 105 aa11.91□□□□□ -0.5
RAB40C-209ENST00000565511 HSD52Q0P140 79 aa11.91□□□□□ -0.5
RAB40C-209ENST00000565511 HRES1P13985 223 aa11.9□□□□□ -0.5
RAB40C-209ENST00000565511 PSMB2P49721 201 aa11.9□□□□□ -0.5
RAB40C-209ENST00000565511 MPLKIPQ8TAP9 179 aa11.89□□□□□ -0.51
RAB40C-209ENST00000565511 MT2AP02795 61 aa11.88□□□□□ -0.51
RAB40C-209ENST00000565511 CCKP06307 115 aa11.88□□□□□ -0.51
RAB40C-209ENST00000565511 IGHV6-1A0A0B4J1U7 121 aa11.85□□□□□ -0.51
RAB40C-209ENST00000565511 TMEM256-PLSCR3K7ERE1 68 aa11.84□□□□□ -0.51
RAB40C-209ENST00000565511 TRACP01848 142 aa11.84□□□□□ -0.51
RAB40C-209ENST00000565511 FAM236DA0A1B0GTK5 79 aa11.83□□□□□ -0.52
RAB40C-209ENST00000565511 FAM236CP0DP71 79 aa11.83□□□□□ -0.52
RAB40C-209ENST00000565511 H3BQ85 93 aa11.82□□□□□ -0.52
RAB40C-209ENST00000565511 MT1FP04733 61 aa11.81□□□□□ -0.52
RAB40C-209ENST00000565511 UBE2V1Q13404 147 aa11.8□□□□□ -0.52
RAB40C-209ENST00000565511 COX6CP09669 75 aa11.78□□□□□ -0.52
RAB40C-209ENST00000565511 VPS25Q9BRG1 176 aa11.77□□□□□ -0.53
RAB40C-209ENST00000565511 KRTAP9-1A8MXZ3 250 aaPredicted RBP11.76□□□□□ -0.53
RAB40C-209ENST00000565511 A0A1B0GVX0 72 aa11.75□□□□□ -0.53
RAB40C-209ENST00000565511 LCE2BO14633 110 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 96.8 ms