RNA–Protein interactions for RNA: ENST00000565173.1

CAPN3-213, Transcript of calpain 3, humanhuman

TSL 4

Gene CAPN3, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-213ENST00000565173 H7C2G1 150 aa4.65□□□□□ -1.67
CAPN3-213ENST00000565173 CFC1BP0CG36 223 aa4.65□□□□□ -1.67
CAPN3-213ENST00000565173 CFC1P0CG37 223 aa4.65□□□□□ -1.67
CAPN3-213ENST00000565173 FXYD2P54710 66 aa4.65□□□□□ -1.67
CAPN3-213ENST00000565173 PCOTHQ58A44 107 aa4.65□□□□□ -1.67
CAPN3-213ENST00000565173 DHRS4-AS1Q9P1J3 65 aa4.65□□□□□ -1.67
CAPN3-213ENST00000565173 IGLV8-61A0A075B6I0 122 aa4.64□□□□□ -1.67
CAPN3-213ENST00000565173 A0A0B4J2C4 111 aa4.64□□□□□ -1.67
CAPN3-213ENST00000565173 C9orf92A6NGG3 77 aa4.64□□□□□ -1.67
CAPN3-213ENST00000565173 ELOF1P60002 83 aaKnown RBP4.64□□□□□ -1.67
CAPN3-213ENST00000565173 LIMD2Q9BT23 127 aa4.64□□□□□ -1.67
CAPN3-213ENST00000565173 FLGP20930 4061 aaPredicted RBP4.63□□□□□ -1.67
CAPN3-213ENST00000565173 TRBV7-6A0A0J9YX20 115 aa4.63□□□□□ -1.67
CAPN3-213ENST00000565173 A0A1B0GWB2 263 aa4.63□□□□□ -1.67
CAPN3-213ENST00000565173 VAMP3Q15836 100 aa4.63□□□□□ -1.67
CAPN3-213ENST00000565173 LAMTOR3Q9UHA4 124 aa4.63□□□□□ -1.67
CAPN3-213ENST00000565173 CD164Q04900 197 aa4.62□□□□□ -1.67
CAPN3-213ENST00000565173 Q1RN00 199 aa4.62□□□□□ -1.67
CAPN3-213ENST00000565173 SMIM29Q86T20 159 aa4.62□□□□□ -1.67
CAPN3-213ENST00000565173 NHP2Q9NX24 153 aaKnown RBP4.62□□□□□ -1.67
CAPN3-213ENST00000565173 PRO1854Q9UHT4 67 aa4.62□□□□□ -1.67
CAPN3-213ENST00000565173 TSTD3H0UI37 97 aa4.61□□□□□ -1.67
CAPN3-213ENST00000565173 LORP23490 312 aaPredicted RBP4.61□□□□□ -1.67
CAPN3-213ENST00000565173 Q5XG85 94 aa4.61□□□□□ -1.67
CAPN3-213ENST00000565173 DEFB105AQ8NG35 78 aa4.61□□□□□ -1.67
CAPN3-213ENST00000565173 TEX49A0A1B0GTD5 131 aa4.6□□□□□ -1.67
CAPN3-213ENST00000565173 K7ERJ3 54 aa4.6□□□□□ -1.67
CAPN3-213ENST00000565173 BVES-AS1Q5T3Y7 98 aa4.6□□□□□ -1.67
CAPN3-213ENST00000565173 C1orf195Q5TG92 126 aa4.6□□□□□ -1.67
CAPN3-213ENST00000565173 A0A0G2JQZ4 141 aa4.59□□□□□ -1.67
CAPN3-213ENST00000565173 KRTAP10-6P60371 365 aaPredicted RBP4.59□□□□□ -1.67
CAPN3-213ENST00000565173 IGLV5-48A0A075B6I7 105 aa4.58□□□□□ -1.68
CAPN3-213ENST00000565173 M0R143 59 aa4.58□□□□□ -1.68
CAPN3-213ENST00000565173 LINC00575Q6W349 94 aa4.58□□□□□ -1.68
CAPN3-213ENST00000565173 hADV29S1A0JD25 119 aa4.57□□□□□ -1.68
CAPN3-213ENST00000565173 PSMB2P49721 201 aa4.57□□□□□ -1.68
CAPN3-213ENST00000565173 H0YGX0 51 aa4.56□□□□□ -1.68
CAPN3-213ENST00000565173 TRIAP1O43715 76 aa4.56□□□□□ -1.68
CAPN3-213ENST00000565173 RPL37P61927 97 aaKnown RBP4.56□□□□□ -1.68
CAPN3-213ENST00000565173 Q6ZQY7 126 aa4.56□□□□□ -1.68
CAPN3-213ENST00000565173 SNCGO76070 127 aa4.55□□□□□ -1.68
CAPN3-213ENST00000565173 BATFQ16520 125 aa4.55□□□□□ -1.68
CAPN3-213ENST00000565173 COX6CP09669 75 aa4.54□□□□□ -1.68
CAPN3-213ENST00000565173 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.54□□□□□ -1.68
CAPN3-213ENST00000565173 FAM218AQ96MZ4 157 aa4.54□□□□□ -1.68
CAPN3-213ENST00000565173 CLEC2BQ92478 149 aa4.53□□□□□ -1.68
CAPN3-213ENST00000565173 A0A1B0GX51 115 aa4.52□□□□□ -1.69
CAPN3-213ENST00000565173 SCGB1C2P0DMR2 95 aa4.52□□□□□ -1.69
CAPN3-213ENST00000565173 F8WEM9 126 aa4.51□□□□□ -1.69
CAPN3-213ENST00000565173 M0R2T5 61 aa4.51□□□□□ -1.69
CAPN3-213ENST00000565173 NAA38Q9BRA0 125 aaKnown RBP4.51□□□□□ -1.69
CAPN3-213ENST00000565173 TCL1BO95988 128 aa4.5□□□□□ -1.69
CAPN3-213ENST00000565173 DNAL4O96015 105 aa4.5□□□□□ -1.69
CAPN3-213ENST00000565173 OCIAD2Q56VL3 154 aa4.5□□□□□ -1.69
CAPN3-213ENST00000565173 SNHG12Q9BXW3 62 aa4.5□□□□□ -1.69
CAPN3-213ENST00000565173 FABP2P12104 132 aa4.49□□□□□ -1.69
CAPN3-213ENST00000565173 COX6B2Q6YFQ2 88 aa4.49□□□□□ -1.69
CAPN3-213ENST00000565173 PPDPFLQ8WWR9 84 aa4.49□□□□□ -1.69
CAPN3-213ENST00000565173 GHRHP01286 108 aa4.48□□□□□ -1.69
CAPN3-213ENST00000565173 TRBV7-7A0A0K0K1E9 115 aa4.47□□□□□ -1.69
CAPN3-213ENST00000565173 PCP4L1A6NKN8 68 aa4.47□□□□□ -1.69
CAPN3-213ENST00000565173 LST1O00453 97 aa4.47□□□□□ -1.69
CAPN3-213ENST00000565173 IGFL1Q6UW32 110 aa4.47□□□□□ -1.69
CAPN3-213ENST00000565173 ORMDL1Q9P0S3 153 aa4.47□□□□□ -1.69
CAPN3-213ENST00000565173 H3BUT2 72 aa4.46□□□□□ -1.7
CAPN3-213ENST00000565173 TRACP01848 142 aa4.46□□□□□ -1.7
CAPN3-213ENST00000565173 NDUFV3P56181 108 aaKnown RBP4.46□□□□□ -1.7
CAPN3-213ENST00000565173 LYRM7Q5U5X0 104 aa4.46□□□□□ -1.7
CAPN3-213ENST00000565173 Q6JHZ5 121 aa4.46□□□□□ -1.7
CAPN3-213ENST00000565173 Q75L30 129 aa4.46□□□□□ -1.7
CAPN3-213ENST00000565173 H3BQ85 93 aa4.45□□□□□ -1.7
CAPN3-213ENST00000565173 TAX1BP3O14907 124 aa4.45□□□□□ -1.7
CAPN3-213ENST00000565173 ATXN8Q156A1 80 aa4.45□□□□□ -1.7
CAPN3-213ENST00000565173 SVIPQ8NHG7 77 aa4.45□□□□□ -1.7
CAPN3-213ENST00000565173 OBSCN-AS1Q96MR7 158 aa4.45□□□□□ -1.7
CAPN3-213ENST00000565173 A0A1B0GV72 72 aa4.44□□□□□ -1.7
CAPN3-213ENST00000565173 C9orf118A6NHY6 69 aa4.44□□□□□ -1.7
CAPN3-213ENST00000565173 H3BMG7 143 aa4.44□□□□□ -1.7
CAPN3-213ENST00000565173 TMEM256-PLSCR3K7ERE1 68 aa4.44□□□□□ -1.7
CAPN3-213ENST00000565173 USH2AO75445 5202 aa4.43□□□□□ -1.7
CAPN3-213ENST00000565173 COL5A1-AS1Q5SY13 56 aa4.43□□□□□ -1.7
CAPN3-213ENST00000565173 ATP11AUNQ6ZP68 121 aa4.43□□□□□ -1.7
CAPN3-213ENST00000565173 TRBV20-1A0A075B6N2 111 aa4.42□□□□□ -1.7
CAPN3-213ENST00000565173 A0A1W2PPM0 123 aa4.42□□□□□ -1.7
CAPN3-213ENST00000565173 BAALC-AS2P0C853 105 aa4.42□□□□□ -1.7
CAPN3-213ENST00000565173 UBE2V1Q13404 147 aa4.41□□□□□ -1.7
CAPN3-213ENST00000565173 Q6Q795 121 aa4.41□□□□□ -1.7
CAPN3-213ENST00000565173 KRTAP9-8Q9BYQ0 159 aa4.41□□□□□ -1.7
CAPN3-213ENST00000565173 C9JAW5 83 aa4.4□□□□□ -1.71
CAPN3-213ENST00000565173 ANKRD29Q8N6D5 301 aa4.4□□□□□ -1.71
CAPN3-213ENST00000565173 SSPOA2VEC9 5147 aa4.4□□□□□ -1.71
CAPN3-213ENST00000565173 Q96NJ1 140 aa4.39□□□□□ -1.71
CAPN3-213ENST00000565173 C20orf166-AS1Q96NR2 134 aa4.39□□□□□ -1.71
CAPN3-213ENST00000565173 A8MUU9 505 aa4.38□□□□□ -1.71
CAPN3-213ENST00000565173 RBM3P98179 157 aaKnown RBP4.38□□□□□ -1.71
CAPN3-213ENST00000565173 TEN1Q86WV5 123 aa4.38□□□□□ -1.71
CAPN3-213ENST00000565173 SPCS1Q9Y6A9 102 aa4.38□□□□□ -1.71
CAPN3-213ENST00000565173 MTURNQ8N3F0 131 aa4.37□□□□□ -1.71
CAPN3-213ENST00000565173 A0A087WSZ3 146 aa4.36□□□□□ -1.71
CAPN3-213ENST00000565173 A0A1W2PNM2 257 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms