RNA–Protein interactions for RNA: ENST00000564757.5

SCAPER-213, Transcript of S-phase cyclin A associated protein in the ER, humanhuman

TSL 5

Gene SCAPER, Length 626 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPER-213ENST00000564757 CEP290O15078 2479 aa-0.07□□□□□ -2.42
SCAPER-213ENST00000564757 PKD1L3Q7Z443 1732 aa-0.07□□□□□ -2.42
SCAPER-213ENST00000564757 UBR3Q6ZT12 1888 aa-0.07□□□□□ -2.42
SCAPER-213ENST00000564757 FAT1Q14517 4588 aa-0.08□□□□□ -2.42
SCAPER-213ENST00000564757 HMGN2P05204 90 aaKnown RBP-0.08□□□□□ -2.42
SCAPER-213ENST00000564757 PLGLAQ15195 96 aa-0.08□□□□□ -2.42
SCAPER-213ENST00000564757 LELP1Q5T871 98 aa-0.08□□□□□ -2.42
SCAPER-213ENST00000564757 V9GYS6 101 aa-0.08□□□□□ -2.42
SCAPER-213ENST00000564757 FRYQ5TBA9 3013 aa-0.08□□□□□ -2.42
SCAPER-213ENST00000564757 RGPD4Q7Z3J3 1758 aa-0.09□□□□□ -2.42
SCAPER-213ENST00000564757 IQSEC2Q5JU85 1478 aa-0.09□□□□□ -2.42
SCAPER-213ENST00000564757 CDH23Q9H251 3354 aa-0.09□□□□□ -2.42
SCAPER-213ENST00000564757 FLGP20930 4061 aaPredicted RBP-0.09□□□□□ -2.42
SCAPER-213ENST00000564757 VPS13BQ7Z7G8 4022 aa-0.09□□□□□ -2.42
SCAPER-213ENST00000564757 CLIP1P30622 1438 aa-0.09□□□□□ -2.42
SCAPER-213ENST00000564757 CYB5AP00167 134 aa-0.09□□□□□ -2.42
SCAPER-213ENST00000564757 UBE2D4Q9Y2X8 147 aa-0.09□□□□□ -2.42
SCAPER-213ENST00000564757 XIRP2A4UGR9 3374 aa-0.09□□□□□ -2.42
SCAPER-213ENST00000564757 TRRAPQ9Y4A5 3859 aa-0.09□□□□□ -2.42
SCAPER-213ENST00000564757 TRIOO75962 3097 aa-0.1□□□□□ -2.42
SCAPER-213ENST00000564757 ATMQ13315 3056 aa-0.1□□□□□ -2.43
SCAPER-213ENST00000564757 PRUNE2Q8WUY3 3088 aa-0.1□□□□□ -2.43
SCAPER-213ENST00000564757 A0A1B0GUT8 65 aa-0.1□□□□□ -2.43
SCAPER-213ENST00000564757 RPL38P63173 70 aaKnown RBP-0.1□□□□□ -2.43
SCAPER-213ENST00000564757 APOBP04114 4563 aaKnown RBP-0.1□□□□□ -2.43
SCAPER-213ENST00000564757 NBASA2RRP1 2371 aa-0.1□□□□□ -2.43
SCAPER-213ENST00000564757 PDE4DIPQ5VU43 2346 aa-0.1□□□□□ -2.43
SCAPER-213ENST00000564757 ANK3Q12955 4377 aaKnown RBP-0.11□□□□□ -2.43
SCAPER-213ENST00000564757 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP-0.11□□□□□ -2.43
SCAPER-213ENST00000564757 NMSQ5H8A3 153 aa-0.11□□□□□ -2.43
SCAPER-213ENST00000564757 PYY3Q5JQD4 70 aa-0.11□□□□□ -2.43
SCAPER-213ENST00000564757 CDKN2A-AS1Q9UH64 79 aa-0.11□□□□□ -2.43
SCAPER-213ENST00000564757 PLECQ15149 4684 aaKnown RBP-0.11□□□□□ -2.43
SCAPER-213ENST00000564757 MUC17Q685J3 4493 aa-0.11□□□□□ -2.43
SCAPER-213ENST00000564757 RGPD3A6NKT7 1758 aaPredicted RBP-0.11□□□□□ -2.43
SCAPER-213ENST00000564757 BCORQ6W2J9 1755 aa-0.11□□□□□ -2.43
SCAPER-213ENST00000564757 DNAH5Q8TE73 4624 aa-0.12□□□□□ -2.43
SCAPER-213ENST00000564757 SPRR2EP22531 72 aa-0.12□□□□□ -2.43
SCAPER-213ENST00000564757 SPRR2BP35325 72 aa-0.12□□□□□ -2.43
SCAPER-213ENST00000564757 SPRR2AP35326 72 aa-0.12□□□□□ -2.43
SCAPER-213ENST00000564757 PKHD1L1Q86WI1 4243 aa-0.12□□□□□ -2.43
SCAPER-213ENST00000564757 GOLGB1Q14789 3259 aaKnown RBP-0.12□□□□□ -2.43
SCAPER-213ENST00000564757 DNAH6Q9C0G6 4158 aa-0.13□□□□□ -2.43
SCAPER-213ENST00000564757 DNAH9Q9NYC9 4486 aa-0.13□□□□□ -2.43
SCAPER-213ENST00000564757 MYO3AQ8NEV4 1616 aa-0.13□□□□□ -2.43
SCAPER-213ENST00000564757 IQCF6A8MYZ5 107 aa-0.13□□□□□ -2.43
SCAPER-213ENST00000564757 COX7BP24311 80 aa-0.13□□□□□ -2.43
SCAPER-213ENST00000564757 DEFB135Q30KP9 77 aa-0.13□□□□□ -2.43
SCAPER-213ENST00000564757 SACSQ9NZJ4 4579 aa-0.13□□□□□ -2.43
SCAPER-213ENST00000564757 CMYA5Q8N3K9 4069 aa-0.13□□□□□ -2.43
SCAPER-213ENST00000564757 DNAH3Q8TD57 4116 aa-0.13□□□□□ -2.43
SCAPER-213ENST00000564757 TROQ12816 1431 aaPredicted RBP-0.13□□□□□ -2.43
SCAPER-213ENST00000564757 KRTAP20-2Q3LI61 65 aa-0.14□□□□□ -2.43
SCAPER-213ENST00000564757 S100A16Q96FQ6 103 aaKnown RBP-0.14□□□□□ -2.43
SCAPER-213ENST00000564757 GAFA1Q96PS6 74 aa-0.14□□□□□ -2.43
SCAPER-213ENST00000564757 AKAP9Q99996 3911 aa-0.15□□□□□ -2.43
SCAPER-213ENST00000564757 DYNC2H1Q8NCM8 4307 aaKnown RBP-0.15□□□□□ -2.43
SCAPER-213ENST00000564757 KRTAP6-1Q3LI64 71 aa-0.15□□□□□ -2.43
SCAPER-213ENST00000564757 RGPD2P0DJD1 1756 aa-0.15□□□□□ -2.43
SCAPER-213ENST00000564757 CEP162Q5TB80 1403 aa-0.15□□□□□ -2.43
SCAPER-213ENST00000564757 ZZEF1O43149 2961 aa-0.15□□□□□ -2.43
SCAPER-213ENST00000564757 PLIN4Q96Q06 1357 aa-0.16□□□□□ -2.43
SCAPER-213ENST00000564757 LRRC7Q96NW7 1537 aa-0.16□□□□□ -2.43
SCAPER-213ENST00000564757 DMDP11532 3685 aa-0.16□□□□□ -2.43
SCAPER-213ENST00000564757 PVALEFA0A1B0GWK0 134 aa-0.16□□□□□ -2.44
SCAPER-213ENST00000564757 K7EP34 96 aa-0.16□□□□□ -2.44
SCAPER-213ENST00000564757 WFDC13Q8IUB5 93 aa-0.16□□□□□ -2.44
SCAPER-213ENST00000564757 MAGI2Q86UL8 1455 aa-0.16□□□□□ -2.44
SCAPER-213ENST00000564757 NEXMIFQ5QGS0 1516 aa-0.17□□□□□ -2.44
SCAPER-213ENST00000564757 MYMXA0A1B0GTQ4 84 aa-0.17□□□□□ -2.44
SCAPER-213ENST00000564757 SNRPFP62306 86 aaKnown RBP-0.17□□□□□ -2.44
SCAPER-213ENST00000564757 QSER1Q2KHR3 1735 aa-0.17□□□□□ -2.44
SCAPER-213ENST00000564757 C9orf62Q8N4C0 152 aa-0.17□□□□□ -2.44
SCAPER-213ENST00000564757 WFDC9Q8NEX5 89 aa-0.17□□□□□ -2.44
SCAPER-213ENST00000564757 ALKQ9UM73 1620 aa-0.17□□□□□ -2.44
SCAPER-213ENST00000564757 MED14O60244 1454 aa-0.17□□□□□ -2.44
SCAPER-213ENST00000564757 UBR1Q8IWV7 1749 aa-0.18□□□□□ -2.44
SCAPER-213ENST00000564757 TTC37Q6PGP7 1564 aa-0.18□□□□□ -2.44
SCAPER-213ENST00000564757 KNL1Q8NG31 2342 aa-0.18□□□□□ -2.44
SCAPER-213ENST00000564757 ATP7BP35670 1465 aa-0.18□□□□□ -2.44
SCAPER-213ENST00000564757 LRRC9Q6ZRR7 1453 aa-0.19□□□□□ -2.44
SCAPER-213ENST00000564757 DNAH17Q9UFH2 4485 aa-0.2□□□□□ -2.44
SCAPER-213ENST00000564757 LINC00643Q86TS7 51 aa-0.2□□□□□ -2.44
SCAPER-213ENST00000564757 ABCC3O15438 1527 aa-0.21□□□□□ -2.44
SCAPER-213ENST00000564757 CEBPZOSA8MTT3 80 aa-0.21□□□□□ -2.44
SCAPER-213ENST00000564757 RABAC1Q9UI14 185 aa-0.21□□□□□ -2.44
SCAPER-213ENST00000564757 DNAH2Q9P225 4427 aa-0.22□□□□□ -2.44
SCAPER-213ENST00000564757 TRAV21A0A0B4J279 112 aa-0.22□□□□□ -2.44
SCAPER-213ENST00000564757 PREX1Q8TCU6 1659 aa-0.22□□□□□ -2.44
SCAPER-213ENST00000564757 RGPD1P0DJD0 1748 aa-0.22□□□□□ -2.44
SCAPER-213ENST00000564757 SUPT6HQ7KZ85 1726 aaKnown RBP-0.22□□□□□ -2.44
SCAPER-213ENST00000564757 DNAH10Q8IVF4 4471 aa-0.22□□□□□ -2.45
SCAPER-213ENST00000564757 DNAH8Q96JB1 4490 aa-0.22□□□□□ -2.45
SCAPER-213ENST00000564757 DNAH11Q96DT5 4516 aa-0.23□□□□□ -2.45
SCAPER-213ENST00000564757 RGPD8O14715 1765 aaPredicted RBP-0.23□□□□□ -2.45
SCAPER-213ENST00000564757 RGPD5Q99666 1765 aa-0.23□□□□□ -2.45
SCAPER-213ENST00000564757 H0YGG7 62 aa-0.23□□□□□ -2.45
SCAPER-213ENST00000564757 ACYP1P07311 99 aa-0.23□□□□□ -2.45
SCAPER-213ENST00000564757 SPRR2FQ96RM1 72 aa-0.23□□□□□ -2.45
SCAPER-213ENST00000564757 VPS13DQ5THJ4 4388 aa-0.24□□□□□ -2.45
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms