RNA–Protein interactions for RNA: ENST00000564606.5

ATXN3-249, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 645 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-249ENST00000564606 K7EIL1 84 aa4.83□□□□□ -1.64
ATXN3-249ENST00000564606 K7EQZ3 153 aa4.83□□□□□ -1.64
ATXN3-249ENST00000564606 C4orf26Q17RF5 130 aa4.83□□□□□ -1.64
ATXN3-249ENST00000564606 C9orf163Q8N9P6 203 aa4.83□□□□□ -1.64
ATXN3-249ENST00000564606 CDK2AP2O75956 126 aa4.82□□□□□ -1.64
ATXN3-249ENST00000564606 CASC2Q6XLA1 102 aa4.82□□□□□ -1.64
ATXN3-249ENST00000564606 OXTP01178 125 aa4.81□□□□□ -1.64
ATXN3-249ENST00000564606 PRR15Q8IV56 129 aa4.81□□□□□ -1.64
ATXN3-249ENST00000564606 APLNQ9ULZ1 77 aa4.81□□□□□ -1.64
ATXN3-249ENST00000564606 ZNF469Q96JG9 3925 aaPredicted RBP4.8□□□□□ -1.64
ATXN3-249ENST00000564606 NBDYA0A0U1RRE5 68 aa4.8□□□□□ -1.64
ATXN3-249ENST00000564606 PRLHP81277 87 aa4.8□□□□□ -1.64
ATXN3-249ENST00000564606 MOBPQ13875 183 aa4.8□□□□□ -1.64
ATXN3-249ENST00000564606 C1orf195Q5TG92 126 aa4.8□□□□□ -1.64
ATXN3-249ENST00000564606 ZCCHC13Q8WW36 166 aaKnown RBP4.8□□□□□ -1.64
ATXN3-249ENST00000564606 OTOGQ6ZRI0 2925 aa4.79□□□□□ -1.64
ATXN3-249ENST00000564606 Q1T7F1 81 aa4.79□□□□□ -1.64
ATXN3-249ENST00000564606 CASC10Q5T4H9 136 aa4.79□□□□□ -1.64
ATXN3-249ENST00000564606 KRTAP19-1Q8IUB9 90 aa4.79□□□□□ -1.64
ATXN3-249ENST00000564606 KRTAP7-1Q8IUC3 87 aa4.79□□□□□ -1.64
ATXN3-249ENST00000564606 NBPF19A0A087WUL8 3843 aa4.79□□□□□ -1.64
ATXN3-249ENST00000564606 TRAV22A0A0B4J277 110 aa4.78□□□□□ -1.64
ATXN3-249ENST00000564606 A0A1W2PNN7 141 aa4.78□□□□□ -1.64
ATXN3-249ENST00000564606 KRTAP4-8Q9BYQ9 185 aa4.78□□□□□ -1.64
ATXN3-249ENST00000564606 VWFP04275 2813 aa4.78□□□□□ -1.65
ATXN3-249ENST00000564606 H0Y9P7 68 aa4.77□□□□□ -1.65
ATXN3-249ENST00000564606 FP248Q71RG6 208 aaPredicted RBP4.77□□□□□ -1.65
ATXN3-249ENST00000564606 LIMD2Q9BT23 127 aa4.77□□□□□ -1.65
ATXN3-249ENST00000564606 HECTD1Q9ULT8 2610 aa4.77□□□□□ -1.65
ATXN3-249ENST00000564606 PHF5AQ7RTV0 110 aaKnown RBP4.76□□□□□ -1.65
ATXN3-249ENST00000564606 WFDC13Q8IUB5 93 aa4.76□□□□□ -1.65
ATXN3-249ENST00000564606 LINC00208Q96KT6 92 aa4.76□□□□□ -1.65
ATXN3-249ENST00000564606 LINC00472Q9H8W2 130 aa4.76□□□□□ -1.65
ATXN3-249ENST00000564606 HIVEP1P15822 2718 aa4.76□□□□□ -1.65
ATXN3-249ENST00000564606 KRTAP29-1A8MX34 341 aaPredicted RBP4.75□□□□□ -1.65
ATXN3-249ENST00000564606 KRTAP3-1Q9BYR8 98 aa4.75□□□□□ -1.65
ATXN3-249ENST00000564606 LINC00483Q53H64 154 aa4.74□□□□□ -1.65
ATXN3-249ENST00000564606 C1orf64Q8NEQ6 169 aa4.74□□□□□ -1.65
ATXN3-249ENST00000564606 MPLKIPQ8TAP9 179 aa4.74□□□□□ -1.65
ATXN3-249ENST00000564606 BRK1Q8WUW1 75 aa4.74□□□□□ -1.65
ATXN3-249ENST00000564606 TENM1Q9UKZ4 2725 aa4.74□□□□□ -1.65
ATXN3-249ENST00000564606 KRTAP23-1A1A580 65 aa4.73□□□□□ -1.65
ATXN3-249ENST00000564606 LRCOL1A6NCL2 159 aa4.73□□□□□ -1.65
ATXN3-249ENST00000564606 KRTAP4-12Q9BQ66 201 aa4.73□□□□□ -1.65
ATXN3-249ENST00000564606 LINC00336Q6ZUF6 198 aa4.72□□□□□ -1.65
ATXN3-249ENST00000564606 SPACA4Q8TDM5 124 aa4.72□□□□□ -1.65
ATXN3-249ENST00000564606 CD164Q04900 197 aa4.71□□□□□ -1.66
ATXN3-249ENST00000564606 KRTAP13-1Q8IUC0 172 aa4.71□□□□□ -1.66
ATXN3-249ENST00000564606 KRTAP1-5Q9BYS1 174 aa4.71□□□□□ -1.66
ATXN3-249ENST00000564606 IGLV7-46A0A075B6I9 117 aa4.7□□□□□ -1.66
ATXN3-249ENST00000564606 PRB2P02812 416 aaPredicted RBP4.7□□□□□ -1.66
ATXN3-249ENST00000564606 KRTAP9-2Q9BYQ4 174 aa4.7□□□□□ -1.66
ATXN3-249ENST00000564606 F8P00451 2351 aa4.69□□□□□ -1.66
ATXN3-249ENST00000564606 A0A1B0GVX0 72 aa4.69□□□□□ -1.66
ATXN3-249ENST00000564606 C8orf87E5RJ46 101 aa4.69□□□□□ -1.66
ATXN3-249ENST00000564606 ZNF861PO60384 105 aa4.69□□□□□ -1.66
ATXN3-249ENST00000564606 KRTAP19-4Q3LI73 84 aa4.69□□□□□ -1.66
ATXN3-249ENST00000564606 SSBP3-AS1Q7Z2R9 100 aa4.69□□□□□ -1.66
ATXN3-249ENST00000564606 CUBNO60494 3623 aa4.68□□□□□ -1.66
ATXN3-249ENST00000564606 A0A087WTM6 91 aa4.68□□□□□ -1.66
ATXN3-249ENST00000564606 IGLV9-49A0A0B4J1Y8 123 aa4.68□□□□□ -1.66
ATXN3-249ENST00000564606 MMP24-AS1A0A0U1RRL7 71 aa4.68□□□□□ -1.66
ATXN3-249ENST00000564606 LOC101927531A0A1B0GV80 90 aa4.68□□□□□ -1.66
ATXN3-249ENST00000564606 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.68□□□□□ -1.66
ATXN3-249ENST00000564606 CHTF8P0CG12 524 aa4.68□□□□□ -1.66
ATXN3-249ENST00000564606 DEFB116Q30KQ4 102 aa4.68□□□□□ -1.66
ATXN3-249ENST00000564606 C8orf17Q9NRJ1 99 aa4.68□□□□□ -1.66
ATXN3-249ENST00000564606 PLAC8Q9NZF1 115 aa4.68□□□□□ -1.66
ATXN3-249ENST00000564606 IGLV5-52A0A0A0MRZ9 124 aa4.67□□□□□ -1.66
ATXN3-249ENST00000564606 KRTAP9-6A0A140TA67 174 aa4.67□□□□□ -1.66
ATXN3-249ENST00000564606 Q6ZR54 194 aa4.67□□□□□ -1.66
ATXN3-249ENST00000564606 Q6ZRN7 208 aaPredicted RBP4.67□□□□□ -1.66
ATXN3-249ENST00000564606 MRPL34Q9BQ48 92 aaKnown RBP4.67□□□□□ -1.66
ATXN3-249ENST00000564606 RTL8CO15255 209 aa4.66□□□□□ -1.66
ATXN3-249ENST00000564606 NDUFS5O43920 106 aa4.66□□□□□ -1.66
ATXN3-249ENST00000564606 ASB16-AS1Q495Z4 193 aa4.66□□□□□ -1.66
ATXN3-249ENST00000564606 FAM229BQ4G0N7 80 aa4.65□□□□□ -1.67
ATXN3-249ENST00000564606 LCE4AQ5TA78 99 aa4.65□□□□□ -1.67
ATXN3-249ENST00000564606 C1orf134Q5TEV5 83 aa4.65□□□□□ -1.67
ATXN3-249ENST00000564606 MAST4O15021 2626 aa4.64□□□□□ -1.67
ATXN3-249ENST00000564606 IGHV6-1A0A0B4J1U7 121 aa4.63□□□□□ -1.67
ATXN3-249ENST00000564606 KRTAP9-7A8MTY7 169 aa4.63□□□□□ -1.67
ATXN3-249ENST00000564606 KRTAP10-2P60368 255 aa4.62□□□□□ -1.67
ATXN3-249ENST00000564606 COA5Q86WW8 74 aa4.62□□□□□ -1.67
ATXN3-249ENST00000564606 PSORS1C2Q9UIG4 136 aa4.62□□□□□ -1.67
ATXN3-249ENST00000564606 A0A0G2JQZ4 141 aa4.61□□□□□ -1.67
ATXN3-249ENST00000564606 IGLV7-43P04211 117 aa4.61□□□□□ -1.67
ATXN3-249ENST00000564606 PRR4Q16378 134 aa4.61□□□□□ -1.67
ATXN3-249ENST00000564606 FLNBO75369 2602 aaKnown RBP4.6□□□□□ -1.67
ATXN3-249ENST00000564606 CHKB-CPT1BH3BT56 60 aa4.6□□□□□ -1.67
ATXN3-249ENST00000564606 ACYP2P14621 99 aa4.6□□□□□ -1.67
ATXN3-249ENST00000564606 Q75L30 129 aa4.6□□□□□ -1.67
ATXN3-249ENST00000564606 KRTAP11-1Q8IUC1 163 aa4.6□□□□□ -1.67
ATXN3-249ENST00000564606 Q8N9P0 234 aaPredicted RBP4.6□□□□□ -1.67
ATXN3-249ENST00000564606 Q96NJ1 140 aa4.6□□□□□ -1.67
ATXN3-249ENST00000564606 PRR15LQ9BU68 103 aa4.6□□□□□ -1.67
ATXN3-249ENST00000564606 TENM3Q9P273 2699 aa4.6□□□□□ -1.67
ATXN3-249ENST00000564606 STAB1Q9NY15 2570 aa4.59□□□□□ -1.67
ATXN3-249ENST00000564606 BAHCC1Q9P281 2608 aa4.59□□□□□ -1.67
ATXN3-249ENST00000564606 DNAH3Q8TD57 4116 aa4.59□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms