RNA–Protein interactions for RNA: ENST00000563911.5

HERPUD1-208, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, human

TSL 3

Gene HERPUD1, Length 844 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HERPUD1-208	ENST00000563911		A8MUU9	505 aa		3.03	□□□□□ -1.92
HERPUD1-208	ENST00000563911	ZNF727	A8MUV8	499 aa		3.03	□□□□□ -1.92
HERPUD1-208	ENST00000563911		F8W1H4	67 aa		3.03	□□□□□ -1.92
HERPUD1-208	ENST00000563911	TMEM250	H0YL14	139 aa		3.03	□□□□□ -1.92
HERPUD1-208	ENST00000563911		J3QQQ9	107 aa		3.03	□□□□□ -1.92
HERPUD1-208	ENST00000563911	TRGC2	P03986	189 aa		3.03	□□□□□ -1.92
HERPUD1-208	ENST00000563911	TMEM258	P61165	79 aa		3.03	□□□□□ -1.92
HERPUD1-208	ENST00000563911	SEC11A	P67812	179 aa		3.03	□□□□□ -1.92
HERPUD1-208	ENST00000563911	C9orf153	Q5TBE3	101 aa		3.03	□□□□□ -1.92
HERPUD1-208	ENST00000563911	DAND5	Q8N907	189 aa		3.03	□□□□□ -1.92
HERPUD1-208	ENST00000563911	TIMM21	Q9BVV7	248 aa		3.03	□□□□□ -1.92
HERPUD1-208	ENST00000563911	LCE3D	Q9BYE3	92 aa		3.03	□□□□□ -1.92
HERPUD1-208	ENST00000563911	KRTAP4-4	Q9BYR3	166 aa		3.03	□□□□□ -1.92
HERPUD1-208	ENST00000563911	TRBV24-1	A0A075B6N3	115 aa		3.02	□□□□□ -1.93
HERPUD1-208	ENST00000563911	IGKV2D-26	A0A0A0MRZ7	120 aa		3.02	□□□□□ -1.93
HERPUD1-208	ENST00000563911	PRLH	P81277	87 aa		3.02	□□□□□ -1.93
HERPUD1-208	ENST00000563911	PMCHL1	Q16048	86 aa		3.02	□□□□□ -1.93
HERPUD1-208	ENST00000563911		Q5XG85	94 aa		3.02	□□□□□ -1.93
HERPUD1-208	ENST00000563911	FP248	Q71RG6	208 aa	Predicted RBP	3.02	□□□□□ -1.93
HERPUD1-208	ENST00000563911	SPANXA2-OT1	Q8N9U9	137 aa		3.02	□□□□□ -1.93
HERPUD1-208	ENST00000563911	ST20-AS1	Q8NBB2	130 aa		3.02	□□□□□ -1.93
HERPUD1-208	ENST00000563911	UMAD1	C9J7I0	102 aa		3.01	□□□□□ -1.93
HERPUD1-208	ENST00000563911		H3BRM9	83 aa		3.01	□□□□□ -1.93
HERPUD1-208	ENST00000563911	SNCG	O76070	127 aa		3.01	□□□□□ -1.93
HERPUD1-208	ENST00000563911	FABP2	P12104	132 aa		3.01	□□□□□ -1.93
HERPUD1-208	ENST00000563911	HERVK_113	P63121	156 aa		3.01	□□□□□ -1.93
HERPUD1-208	ENST00000563911	LUZP6	Q538Z0	58 aa		3.01	□□□□□ -1.93
HERPUD1-208	ENST00000563911	PCOTH	Q58A44	107 aa		3.01	□□□□□ -1.93
HERPUD1-208	ENST00000563911	ANKRD29	Q8N6D5	301 aa		3.01	□□□□□ -1.93
HERPUD1-208	ENST00000563911		Q8NDZ9	215 aa		3.01	□□□□□ -1.93
HERPUD1-208	ENST00000563911	TP73-AS1	Q9UF72	201 aa		3.01	□□□□□ -1.93
HERPUD1-208	ENST00000563911	SPCS1	Q9Y6A9	102 aa		3.01	□□□□□ -1.93
HERPUD1-208	ENST00000563911	SYNE2	Q8WXH0	6885 aa	Known RBP	3.01	□□□□□ -1.93
HERPUD1-208	ENST00000563911	UQCRQ	O14949	82 aa		3	□□□□□ -1.93
HERPUD1-208	ENST00000563911	MT-ATP8	P03928	68 aa		3	□□□□□ -1.93
HERPUD1-208	ENST00000563911	FCER1G	P30273	86 aa		3	□□□□□ -1.93
HERPUD1-208	ENST00000563911	MRPS36	P82909	103 aa	Known RBP	3	□□□□□ -1.93
HERPUD1-208	ENST00000563911	MRPL51	Q4U2R6	128 aa	Known RBP	3	□□□□□ -1.93
HERPUD1-208	ENST00000563911	BVES-AS1	Q5T3Y7	98 aa		3	□□□□□ -1.93
HERPUD1-208	ENST00000563911	MIR7-3HG	Q8N6C7	128 aa		3	□□□□□ -1.93
HERPUD1-208	ENST00000563911	PMCHL2	Q9BQD1	86 aa		3	□□□□□ -1.93
HERPUD1-208	ENST00000563911		A0A1W2PPM0	123 aa		2.99	□□□□□ -1.93
HERPUD1-208	ENST00000563911	SCGB1D4	Q6XE38	83 aa		2.99	□□□□□ -1.93
HERPUD1-208	ENST00000563911	ATOH7	Q8N100	152 aa		2.99	□□□□□ -1.93
HERPUD1-208	ENST00000563911	COPS9	Q8WXC6	57 aa		2.99	□□□□□ -1.93
HERPUD1-208	ENST00000563911	MANBAL	Q9NQG1	85 aa		2.99	□□□□□ -1.93
HERPUD1-208	ENST00000563911	MACF1	Q9UPN3	7388 aa	Known RBP	2.99	□□□□□ -1.93
HERPUD1-208	ENST00000563911	FAM236A	A0A1B0GUQ0	79 aa		2.98	□□□□□ -1.93
HERPUD1-208	ENST00000563911		A0A1B0GUT8	65 aa		2.98	□□□□□ -1.93
HERPUD1-208	ENST00000563911	FAM236B	A0A1B0GV22	79 aa		2.98	□□□□□ -1.93
HERPUD1-208	ENST00000563911	HIGD1C	A8MV81	97 aa		2.98	□□□□□ -1.93
HERPUD1-208	ENST00000563911		M0R378	163 aa		2.98	□□□□□ -1.93
HERPUD1-208	ENST00000563911	HBB	P68871	147 aa		2.98	□□□□□ -1.93
HERPUD1-208	ENST00000563911	ORMDL3	Q8N138	153 aa		2.98	□□□□□ -1.93
HERPUD1-208	ENST00000563911	GNB1L	Q9BYB4	327 aa		2.98	□□□□□ -1.93
HERPUD1-208	ENST00000563911		A8MWL6	223 aa		2.97	□□□□□ -1.93
HERPUD1-208	ENST00000563911	NPY	P01303	97 aa		2.97	□□□□□ -1.93
HERPUD1-208	ENST00000563911	FAM104B	Q5XKR9	115 aa		2.97	□□□□□ -1.93
HERPUD1-208	ENST00000563911	SPAG11A	Q6PDA7	123 aa		2.97	□□□□□ -1.93
HERPUD1-208	ENST00000563911	SPRR4	Q96PI1	79 aa		2.97	□□□□□ -1.93
HERPUD1-208	ENST00000563911	TOMM7	Q9P0U1	55 aa		2.97	□□□□□ -1.93
HERPUD1-208	ENST00000563911	TRBV20-1	A0A075B6N2	111 aa		2.96	□□□□□ -1.94
HERPUD1-208	ENST00000563911	IGHV6-1	A0A0B4J1U7	121 aa		2.96	□□□□□ -1.94
HERPUD1-208	ENST00000563911		H3BMG7	143 aa		2.96	□□□□□ -1.94
HERPUD1-208	ENST00000563911		M0R2T5	61 aa		2.96	□□□□□ -1.94
HERPUD1-208	ENST00000563911	TRAC	P01848	142 aa		2.96	□□□□□ -1.94
HERPUD1-208	ENST00000563911	PRR15	Q8IV56	129 aa		2.96	□□□□□ -1.94
HERPUD1-208	ENST00000563911		Q8IZM0	81 aa		2.96	□□□□□ -1.94
HERPUD1-208	ENST00000563911	BRK1	Q8WUW1	75 aa		2.96	□□□□□ -1.94
HERPUD1-208	ENST00000563911	AMELX	Q99217	191 aa		2.96	□□□□□ -1.94
HERPUD1-208	ENST00000563911	SMIM2	Q9BVW6	85 aa		2.96	□□□□□ -1.94
HERPUD1-208	ENST00000563911	CDKN2A-AS1	Q9UH64	79 aa		2.96	□□□□□ -1.94
HERPUD1-208	ENST00000563911		H3BUT2	72 aa		2.95	□□□□□ -1.94
HERPUD1-208	ENST00000563911	PSMB2	P49721	201 aa		2.95	□□□□□ -1.94
HERPUD1-208	ENST00000563911	PPDPFL	Q8WWR9	84 aa		2.95	□□□□□ -1.94
HERPUD1-208	ENST00000563911	C20orf78	Q9BR46	151 aa		2.95	□□□□□ -1.94
HERPUD1-208	ENST00000563911	EIF5A2	Q9GZV4	153 aa	Known RBP	2.95	□□□□□ -1.94
HERPUD1-208	ENST00000563911		V9GYV3	84 aa		2.95	□□□□□ -1.94
HERPUD1-208	ENST00000563911		D6R8Y8	96 aa		2.94	□□□□□ -1.94
HERPUD1-208	ENST00000563911		F8VRH5	84 aa		2.94	□□□□□ -1.94
HERPUD1-208	ENST00000563911	SYS1-DBNDD2	H3BUS1	97 aa		2.94	□□□□□ -1.94
HERPUD1-208	ENST00000563911	NDUFS5	O43920	106 aa		2.94	□□□□□ -1.94
HERPUD1-208	ENST00000563911	KRTDAP	P60985	99 aa		2.94	□□□□□ -1.94
HERPUD1-208	ENST00000563911	FAM19A3	Q7Z5A8	133 aa		2.94	□□□□□ -1.94
HERPUD1-208	ENST00000563911	C18orf32	Q8TCD1	76 aa		2.94	□□□□□ -1.94
HERPUD1-208	ENST00000563911	PRELID3A	Q96N28	172 aa		2.94	□□□□□ -1.94
HERPUD1-208	ENST00000563911	HIGD2A	Q9BW72	106 aa		2.94	□□□□□ -1.94
HERPUD1-208	ENST00000563911	IMUP	Q9GZP8	106 aa		2.94	□□□□□ -1.94
HERPUD1-208	ENST00000563911	TRBV7-6	A0A0J9YX20	115 aa		2.93	□□□□□ -1.94
HERPUD1-208	ENST00000563911	IGIP	A6NJ69	53 aa		2.93	□□□□□ -1.94
HERPUD1-208	ENST00000563911	C8orf87	E5RJ46	101 aa		2.93	□□□□□ -1.94
HERPUD1-208	ENST00000563911	SPINK1	P00995	79 aa		2.93	□□□□□ -1.94
HERPUD1-208	ENST00000563911	CKS2	P33552	79 aa		2.93	□□□□□ -1.94
HERPUD1-208	ENST00000563911	SPINT4	Q6UDR6	99 aa		2.93	□□□□□ -1.94
HERPUD1-208	ENST00000563911	TMEM136	Q6ZRR5	245 aa		2.93	□□□□□ -1.94
HERPUD1-208	ENST00000563911	TMEM141	Q96I45	108 aa		2.93	□□□□□ -1.94
HERPUD1-208	ENST00000563911	RBM12B-AS1	Q9P1G2	102 aa		2.93	□□□□□ -1.94
HERPUD1-208	ENST00000563911	SERP1	Q9Y6X1	66 aa		2.93	□□□□□ -1.94
HERPUD1-208	ENST00000563911	C9orf92	A6NGG3	77 aa		2.92	□□□□□ -1.94
HERPUD1-208	ENST00000563911		C9JQL5	133 aa		2.92	□□□□□ -1.94

Retrieved 100 of 20,778 RNA–protein pairs in 105.2 ms