RNA–Protein interactions for RNA: ENST00000563842.5

CLK3-213, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 860 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-213ENST00000563842 F8WEM9 126 aa7.55□□□□□ -1.2
CLK3-213ENST00000563842 SNCGO76070 127 aa7.55□□□□□ -1.2
CLK3-213ENST00000563842 C2orf91Q6ZV80 131 aa7.55□□□□□ -1.2
CLK3-213ENST00000563842 TMA7Q9Y2S6 64 aaKnown RBP7.55□□□□□ -1.2
CLK3-213ENST00000563842 A0A0U1RQV1 116 aa7.54□□□□□ -1.2
CLK3-213ENST00000563842 H7C2G1 150 aa7.54□□□□□ -1.2
CLK3-213ENST00000563842 PYY3Q5JQD4 70 aa7.54□□□□□ -1.2
CLK3-213ENST00000563842 HRCT1Q6UXD1 115 aa7.54□□□□□ -1.2
CLK3-213ENST00000563842 Q6ZQY7 126 aa7.54□□□□□ -1.2
CLK3-213ENST00000563842 CEND1Q8N111 149 aa7.54□□□□□ -1.2
CLK3-213ENST00000563842 MUC2Q02817 5179 aa7.54□□□□□ -1.2
CLK3-213ENST00000563842 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.53□□□□□ -1.2
CLK3-213ENST00000563842 H0YGX0 51 aa7.52□□□□□ -1.21
CLK3-213ENST00000563842 KRTAP13-3Q3SY46 172 aa7.52□□□□□ -1.21
CLK3-213ENST00000563842 PPDPFLQ8WWR9 84 aa7.52□□□□□ -1.21
CLK3-213ENST00000563842 PRO1854Q9UHT4 67 aa7.5□□□□□ -1.21
CLK3-213ENST00000563842 OCIAD2Q56VL3 154 aa7.49□□□□□ -1.21
CLK3-213ENST00000563842 Q5XG85 94 aa7.49□□□□□ -1.21
CLK3-213ENST00000563842 GHRHP01286 108 aa7.48□□□□□ -1.21
CLK3-213ENST00000563842 HSD52Q0P140 79 aa7.48□□□□□ -1.21
CLK3-213ENST00000563842 Q6JHZ5 121 aa7.48□□□□□ -1.21
CLK3-213ENST00000563842 FXYD2P54710 66 aa7.47□□□□□ -1.21
CLK3-213ENST00000563842 SNHG12Q9BXW3 62 aa7.47□□□□□ -1.21
CLK3-213ENST00000563842 UQCR10Q9UDW1 63 aa7.47□□□□□ -1.21
CLK3-213ENST00000563842 A0A1B0GX51 115 aa7.46□□□□□ -1.22
CLK3-213ENST00000563842 IGLV8-61A0A075B6I0 122 aa7.45□□□□□ -1.22
CLK3-213ENST00000563842 TCL1BO95988 128 aa7.45□□□□□ -1.22
CLK3-213ENST00000563842 CLEC2BQ92478 149 aa7.44□□□□□ -1.22
CLK3-213ENST00000563842 A0A0G2JQZ4 141 aa7.43□□□□□ -1.22
CLK3-213ENST00000563842 SEC61BP60468 96 aaKnown RBP7.43□□□□□ -1.22
CLK3-213ENST00000563842 COX6CP09669 75 aa7.41□□□□□ -1.22
CLK3-213ENST00000563842 ASB16-AS1Q495Z4 193 aa7.41□□□□□ -1.22
CLK3-213ENST00000563842 IGFL1Q6UW32 110 aa7.41□□□□□ -1.22
CLK3-213ENST00000563842 TRIAP1O43715 76 aa7.4□□□□□ -1.22
CLK3-213ENST00000563842 PSMB2P49721 201 aa7.4□□□□□ -1.22
CLK3-213ENST00000563842 C1orf195Q5TG92 126 aa7.4□□□□□ -1.22
CLK3-213ENST00000563842 FAM218AQ96MZ4 157 aa7.4□□□□□ -1.22
CLK3-213ENST00000563842 CRCT1Q9UGL9 99 aa7.4□□□□□ -1.22
CLK3-213ENST00000563842 XP32Q5T750 250 aa7.39□□□□□ -1.23
CLK3-213ENST00000563842 TRBV7-7A0A0K0K1E9 115 aa7.38□□□□□ -1.23
CLK3-213ENST00000563842 H3BQ85 93 aa7.38□□□□□ -1.23
CLK3-213ENST00000563842 DNAL4O96015 105 aa7.38□□□□□ -1.23
CLK3-213ENST00000563842 MUC17Q685J3 4493 aa7.38□□□□□ -1.23
CLK3-213ENST00000563842 NDUFV3P56181 108 aaKnown RBP7.37□□□□□ -1.23
CLK3-213ENST00000563842 FABP2P12104 132 aa7.36□□□□□ -1.23
CLK3-213ENST00000563842 C9orf92A6NGG3 77 aa7.35□□□□□ -1.23
CLK3-213ENST00000563842 H3BUT2 72 aa7.35□□□□□ -1.23
CLK3-213ENST00000563842 K7ERJ3 54 aa7.35□□□□□ -1.23
CLK3-213ENST00000563842 LCE2AQ5TA79 106 aaPredicted RBP7.35□□□□□ -1.23
CLK3-213ENST00000563842 ORMDL1Q9P0S3 153 aa7.34□□□□□ -1.23
CLK3-213ENST00000563842 H3BMG7 143 aa7.33□□□□□ -1.24
CLK3-213ENST00000563842 Q6Q795 121 aa7.33□□□□□ -1.24
CLK3-213ENST00000563842 TEN1Q86WV5 123 aa7.33□□□□□ -1.24
CLK3-213ENST00000563842 SS18L2Q9UHA2 77 aa7.33□□□□□ -1.24
CLK3-213ENST00000563842 FSIP2Q5CZC0 6907 aa7.33□□□□□ -1.24
CLK3-213ENST00000563842 TMEM256-PLSCR3K7ERE1 68 aa7.31□□□□□ -1.24
CLK3-213ENST00000563842 LST1O00453 97 aa7.31□□□□□ -1.24
CLK3-213ENST00000563842 SMIM6P0DI80 62 aa7.31□□□□□ -1.24
CLK3-213ENST00000563842 SCGB1C2P0DMR2 95 aa7.31□□□□□ -1.24
CLK3-213ENST00000563842 M0R143 59 aa7.3□□□□□ -1.24
CLK3-213ENST00000563842 TRACP01848 142 aa7.27□□□□□ -1.25
CLK3-213ENST00000563842 UBE2V1Q13404 147 aa7.26□□□□□ -1.25
CLK3-213ENST00000563842 ANKRD29Q8N6D5 301 aa7.26□□□□□ -1.25
CLK3-213ENST00000563842 A0A087WSZ3 146 aa7.24□□□□□ -1.25
CLK3-213ENST00000563842 TSTD3H0UI37 97 aa7.24□□□□□ -1.25
CLK3-213ENST00000563842 PCOTHQ58A44 107 aa7.24□□□□□ -1.25
CLK3-213ENST00000563842 TRBV7-4A0A0J9YYF1 115 aa7.22□□□□□ -1.25
CLK3-213ENST00000563842 RPL37P61927 97 aaKnown RBP7.22□□□□□ -1.25
CLK3-213ENST00000563842 KRTAP4-1Q9BYQ7 146 aa7.22□□□□□ -1.25
CLK3-213ENST00000563842 A0A1W2PNM2 257 aa7.21□□□□□ -1.26
CLK3-213ENST00000563842 A0A1B0GV72 72 aa7.19□□□□□ -1.26
CLK3-213ENST00000563842 RBM3P98179 157 aaKnown RBP7.19□□□□□ -1.26
CLK3-213ENST00000563842 ATXN8Q156A1 80 aa7.19□□□□□ -1.26
CLK3-213ENST00000563842 OBSCN-AS1Q96MR7 158 aa7.19□□□□□ -1.26
CLK3-213ENST00000563842 CCKP06307 115 aa7.18□□□□□ -1.26
CLK3-213ENST00000563842 BAALC-AS2P0C853 105 aa7.18□□□□□ -1.26
CLK3-213ENST00000563842 LYRM7Q5U5X0 104 aa7.18□□□□□ -1.26
CLK3-213ENST00000563842 DSCR8Q96T75 97 aa7.17□□□□□ -1.26
CLK3-213ENST00000563842 LOC105371267A0A1B0GV96 52 aa7.16□□□□□ -1.26
CLK3-213ENST00000563842 C21orf62-AS1Q17RA5 79 aa7.16□□□□□ -1.26
CLK3-213ENST00000563842 Q75L30 129 aa7.15□□□□□ -1.26
CLK3-213ENST00000563842 Q96NJ1 140 aa7.15□□□□□ -1.26
CLK3-213ENST00000563842 ATP11AUNQ6ZP68 121 aa7.14□□□□□ -1.27
CLK3-213ENST00000563842 SIGMAR1Q99720 223 aa7.14□□□□□ -1.27
CLK3-213ENST00000563842 NAA38Q9BRA0 125 aaKnown RBP7.14□□□□□ -1.27
CLK3-213ENST00000563842 C9JAW5 83 aa7.13□□□□□ -1.27
CLK3-213ENST00000563842 BATFQ16520 125 aa7.13□□□□□ -1.27
CLK3-213ENST00000563842 VPS25Q9BRG1 176 aa7.13□□□□□ -1.27
CLK3-213ENST00000563842 TRBV20-1A0A075B6N2 111 aa7.12□□□□□ -1.27
CLK3-213ENST00000563842 JMJD7-PLA2G4BH0Y9G9 81 aa7.12□□□□□ -1.27
CLK3-213ENST00000563842 IGKV4-1P06312 121 aa7.12□□□□□ -1.27
CLK3-213ENST00000563842 LOC100996750A0A140TA64 210 aa7.09□□□□□ -1.27
CLK3-213ENST00000563842 KRTAP9-7A8MTY7 169 aa7.09□□□□□ -1.27
CLK3-213ENST00000563842 LINC00313P59037 77 aa7.09□□□□□ -1.27
CLK3-213ENST00000563842 KRTAP4-6Q9BYQ5 205 aa7.09□□□□□ -1.27
CLK3-213ENST00000563842 LINC00472Q9H8W2 130 aa7.09□□□□□ -1.27
CLK3-213ENST00000563842 PDE6GP18545 87 aa7.08□□□□□ -1.28
CLK3-213ENST00000563842 C20orf166-AS1Q96NR2 134 aa7.08□□□□□ -1.28
CLK3-213ENST00000563842 A0A1B0GW54 56 aa7.07□□□□□ -1.28
CLK3-213ENST00000563842 A8MUU9 505 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms