RNA–Protein interactions for RNA: ENST00000563688.5

SCAPER-208, Transcript of S-phase cyclin A associated protein in the ER, humanhuman

TSL 2

Gene SCAPER, Length 549 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPER-208ENST00000563688 PRO3102Q9H379 93 aa-0.11□□□□□ -2.43
SCAPER-208ENST00000563688 ARL2-SNX15V9GYD0 113 aa-0.11□□□□□ -2.43
SCAPER-208ENST00000563688 FMN2Q9NZ56 1722 aa-0.11□□□□□ -2.43
SCAPER-208ENST00000563688 MARF1Q9Y4F3 1742 aaKnown RBP-0.11□□□□□ -2.43
SCAPER-208ENST00000563688 CCNB3Q8WWL7 1395 aa-0.11□□□□□ -2.43
SCAPER-208ENST00000563688 NCOA2Q15596 1464 aa-0.11□□□□□ -2.43
SCAPER-208ENST00000563688 C1orf167Q5SNV9 1468 aa-0.11□□□□□ -2.43
SCAPER-208ENST00000563688 RALGAPBQ86X10 1494 aa-0.11□□□□□ -2.43
SCAPER-208ENST00000563688 PLEKHH2Q8IVE3 1493 aa-0.11□□□□□ -2.43
SCAPER-208ENST00000563688 MBD5Q9P267 1494 aa-0.11□□□□□ -2.43
SCAPER-208ENST00000563688 SAMD9Q5K651 1589 aa-0.11□□□□□ -2.43
SCAPER-208ENST00000563688 BAZ1AQ9NRL2 1556 aaPredicted RBP-0.11□□□□□ -2.43
SCAPER-208ENST00000563688 WIZO95785 1651 aa-0.11□□□□□ -2.43
SCAPER-208ENST00000563688 RGPD2P0DJD1 1756 aa-0.11□□□□□ -2.43
SCAPER-208ENST00000563688 TROQ12816 1431 aaPredicted RBP-0.12□□□□□ -2.43
SCAPER-208ENST00000563688 SHROOM2Q13796 1616 aa-0.12□□□□□ -2.43
SCAPER-208ENST00000563688 QSER1Q2KHR3 1735 aa-0.12□□□□□ -2.43
SCAPER-208ENST00000563688 DEFB131BA0A096LNP1 70 aa-0.12□□□□□ -2.43
SCAPER-208ENST00000563688 A0A1B0GU69 56 aa-0.12□□□□□ -2.43
SCAPER-208ENST00000563688 LINC00959A0A1B0GUT2 108 aa-0.12□□□□□ -2.43
SCAPER-208ENST00000563688 A0A1B0GUT8 65 aa-0.12□□□□□ -2.43
SCAPER-208ENST00000563688 PVALEFA0A1B0GWK0 134 aa-0.12□□□□□ -2.43
SCAPER-208ENST00000563688 KANTRA0A1W2PQU2 76 aa-0.12□□□□□ -2.43
SCAPER-208ENST00000563688 D6R8Y8 96 aa-0.12□□□□□ -2.43
SCAPER-208ENST00000563688 CHKB-CPT1BH3BT56 60 aa-0.12□□□□□ -2.43
SCAPER-208ENST00000563688 IFI6P09912 130 aa-0.12□□□□□ -2.43
SCAPER-208ENST00000563688 AKAIN1P0CW23 69 aa-0.12□□□□□ -2.43
SCAPER-208ENST00000563688 IFI27P40305 119 aaPredicted RBP-0.12□□□□□ -2.43
SCAPER-208ENST00000563688 DEFB1P60022 68 aa-0.12□□□□□ -2.43
SCAPER-208ENST00000563688 S100A10P60903 97 aa-0.12□□□□□ -2.43
SCAPER-208ENST00000563688 GNG11P61952 73 aa-0.12□□□□□ -2.43
SCAPER-208ENST00000563688 PPP3R1P63098 170 aa-0.12□□□□□ -2.43
SCAPER-208ENST00000563688 MT1XP80297 61 aa-0.12□□□□□ -2.43
SCAPER-208ENST00000563688 SERF2P84101 59 aa-0.12□□□□□ -2.43
SCAPER-208ENST00000563688 DEFB114Q30KQ6 69 aa-0.12□□□□□ -2.43
SCAPER-208ENST00000563688 ATP5EP2Q5VTU8 51 aa-0.12□□□□□ -2.43
SCAPER-208ENST00000563688 HEPN1Q6WQI6 88 aa-0.12□□□□□ -2.43
SCAPER-208ENST00000563688 MUSTN1Q8IVN3 82 aa-0.12□□□□□ -2.43
SCAPER-208ENST00000563688 SERP2Q8N6R1 65 aa-0.12□□□□□ -2.43
SCAPER-208ENST00000563688 FDCSPQ8NFU4 85 aa-0.12□□□□□ -2.43
SCAPER-208ENST00000563688 MT1LQ93083 61 aa-0.12□□□□□ -2.43
SCAPER-208ENST00000563688 TCEAL7Q9BRU2 100 aa-0.12□□□□□ -2.43
SCAPER-208ENST00000563688 DPH3P1Q9H4G8 78 aa-0.12□□□□□ -2.43
SCAPER-208ENST00000563688 FYCO1Q9BQS8 1478 aa-0.12□□□□□ -2.43
SCAPER-208ENST00000563688 MLH3Q9UHC1 1453 aa-0.12□□□□□ -2.43
SCAPER-208ENST00000563688 PLXNC1O60486 1568 aa-0.12□□□□□ -2.43
SCAPER-208ENST00000563688 NRKQ7Z2Y5 1582 aa-0.12□□□□□ -2.43
SCAPER-208ENST00000563688 TET3O43151 1660 aa-0.12□□□□□ -2.43
SCAPER-208ENST00000563688 KDM5AP29375 1690 aaKnown RBP-0.12□□□□□ -2.43
SCAPER-208ENST00000563688 CUL7Q14999 1698 aa-0.12□□□□□ -2.43
SCAPER-208ENST00000563688 TOPAZ1Q8N9V7 1692 aa-0.12□□□□□ -2.43
SCAPER-208ENST00000563688 PRDM15P57071 1507 aaPredicted RBP-0.13□□□□□ -2.43
SCAPER-208ENST00000563688 ARHGAP5Q13017 1502 aa-0.13□□□□□ -2.43
SCAPER-208ENST00000563688 MAP3K1Q13233 1512 aa-0.13□□□□□ -2.43
SCAPER-208ENST00000563688 URB2Q14146 1524 aaKnown RBP-0.13□□□□□ -2.43
SCAPER-208ENST00000563688 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP-0.13□□□□□ -2.43
SCAPER-208ENST00000563688 ALKQ9UM73 1620 aa-0.13□□□□□ -2.43
SCAPER-208ENST00000563688 CHD1O14646 1710 aa-0.13□□□□□ -2.43
SCAPER-208ENST00000563688 NUP188Q5SRE5 1749 aa-0.13□□□□□ -2.43
SCAPER-208ENST00000563688 ANKRD36A6QL64 1941 aa-0.13□□□□□ -2.43
SCAPER-208ENST00000563688 PREX1Q8TCU6 1659 aa-0.13□□□□□ -2.43
SCAPER-208ENST00000563688 ATP10BO94823 1461 aa-0.13□□□□□ -2.43
SCAPER-208ENST00000563688 ADGRL2O95490 1459 aa-0.13□□□□□ -2.43
SCAPER-208ENST00000563688 MYOM2P54296 1465 aa-0.13□□□□□ -2.43
SCAPER-208ENST00000563688 MAGI2Q86UL8 1455 aa-0.13□□□□□ -2.43
SCAPER-208ENST00000563688 CD163L1Q9NR16 1453 aa-0.13□□□□□ -2.43
SCAPER-208ENST00000563688 PLIN4Q96Q06 1357 aa-0.13□□□□□ -2.43
SCAPER-208ENST00000563688 UQCRHLA0A096LP55 91 aa-0.13□□□□□ -2.43
SCAPER-208ENST00000563688 TMEM218A2RU14 115 aa-0.13□□□□□ -2.43
SCAPER-208ENST00000563688 C7orf77A4D0Y5 90 aa-0.13□□□□□ -2.43
SCAPER-208ENST00000563688 CRYM-AS1A6NIL9 109 aa-0.13□□□□□ -2.43
SCAPER-208ENST00000563688 ATP6V1G2-DDX39BF2Z307 99 aa-0.13□□□□□ -2.43
SCAPER-208ENST00000563688 F8WEM9 126 aa-0.13□□□□□ -2.43
SCAPER-208ENST00000563688 H0YAA0 97 aa-0.13□□□□□ -2.43
SCAPER-208ENST00000563688 H3BNG1 76 aa-0.13□□□□□ -2.43
SCAPER-208ENST00000563688 K7EMI3 77 aa-0.13□□□□□ -2.43
SCAPER-208ENST00000563688 CORTO00230 105 aa-0.13□□□□□ -2.43
SCAPER-208ENST00000563688 HMGN2P05204 90 aaKnown RBP-0.13□□□□□ -2.43
SCAPER-208ENST00000563688 MT1BP07438 61 aa-0.13□□□□□ -2.43
SCAPER-208ENST00000563688 COX7BP24311 80 aa-0.13□□□□□ -2.43
SCAPER-208ENST00000563688 RBP2P50120 134 aa-0.13□□□□□ -2.43
SCAPER-208ENST00000563688 SNRPFP62306 86 aaKnown RBP-0.13□□□□□ -2.43
SCAPER-208ENST00000563688 ETDBQ3ZM63 59 aa-0.13□□□□□ -2.43
SCAPER-208ENST00000563688 PYY3Q5JQD4 70 aa-0.13□□□□□ -2.43
SCAPER-208ENST00000563688 GTF2H5Q6ZYL4 71 aa-0.13□□□□□ -2.43
SCAPER-208ENST00000563688 WFDC13Q8IUB5 93 aa-0.13□□□□□ -2.43
SCAPER-208ENST00000563688 KRTAP8-1Q8IUC2 63 aa-0.13□□□□□ -2.43
SCAPER-208ENST00000563688 MT1MQ8N339 61 aa-0.13□□□□□ -2.43
SCAPER-208ENST00000563688 PMCHL2Q9BQD1 86 aa-0.13□□□□□ -2.43
SCAPER-208ENST00000563688 MANBALQ9NQG1 85 aa-0.13□□□□□ -2.43
SCAPER-208ENST00000563688 LINC00474Q9P2X8 69 aa-0.13□□□□□ -2.43
SCAPER-208ENST00000563688 APLNQ9ULZ1 77 aa-0.13□□□□□ -2.43
SCAPER-208ENST00000563688 PKD1L3Q7Z443 1732 aa-0.13□□□□□ -2.43
SCAPER-208ENST00000563688 CRYBG1Q9Y4K1 1723 aa-0.13□□□□□ -2.43
SCAPER-208ENST00000563688 TARBP1Q13395 1621 aaKnown RBP-0.13□□□□□ -2.43
SCAPER-208ENST00000563688 KIAA0586Q9BVV6 1533 aa-0.13□□□□□ -2.43
SCAPER-208ENST00000563688 HFM1A2PYH4 1435 aa-0.13□□□□□ -2.43
SCAPER-208ENST00000563688 CLTCQ00610 1675 aaKnown RBP-0.14□□□□□ -2.43
SCAPER-208ENST00000563688 SMARCA2P51531 1590 aa-0.14□□□□□ -2.43
SCAPER-208ENST00000563688 INO80Q9ULG1 1556 aaPredicted RBP-0.14□□□□□ -2.43
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms