RNA–Protein interactions for RNA: ENST00000563219.1

SHCBP1-202, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 485 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-202ENST00000563219 Q5VSD8 79 aa0.84□□□□□ -2.27
SHCBP1-202ENST00000563219 SPRR1BP22528 89 aa0.83□□□□□ -2.28
SHCBP1-202ENST00000563219 KLK9Q2XQG4 91 aa0.82□□□□□ -2.28
SHCBP1-202ENST00000563219 NOP10Q9NPE3 64 aaKnown RBP0.82□□□□□ -2.28
SHCBP1-202ENST00000563219 PIEZO2Q9H5I5 2752 aa0.82□□□□□ -2.28
SHCBP1-202ENST00000563219 TMEM167AQ8TBQ9 72 aa0.81□□□□□ -2.28
SHCBP1-202ENST00000563219 ASH1LQ9NR48 2969 aaKnown RBP0.81□□□□□ -2.28
SHCBP1-202ENST00000563219 ASXL3Q9C0F0 2248 aa0.81□□□□□ -2.28
SHCBP1-202ENST00000563219 A8MTW9 85 aa0.8□□□□□ -2.28
SHCBP1-202ENST00000563219 K7EIM0 57 aa0.8□□□□□ -2.28
SHCBP1-202ENST00000563219 SPINK1P00995 79 aa0.8□□□□□ -2.28
SHCBP1-202ENST00000563219 DEFB106AQ8N104 65 aa0.8□□□□□ -2.28
SHCBP1-202ENST00000563219 DEFB104AQ8WTQ1 72 aa0.8□□□□□ -2.28
SHCBP1-202ENST00000563219 CACNA1EQ15878 2313 aa0.8□□□□□ -2.28
SHCBP1-202ENST00000563219 CLPSL2Q6UWE3 100 aa0.79□□□□□ -2.28
SHCBP1-202ENST00000563219 S4R3F8 94 aa0.79□□□□□ -2.28
SHCBP1-202ENST00000563219 RPL39P5Q59GN2 51 aa0.78□□□□□ -2.28
SHCBP1-202ENST00000563219 A0A0C4DFX4 3053 aa0.78□□□□□ -2.28
SHCBP1-202ENST00000563219 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP0.77□□□□□ -2.293e-7■■■■■ 26.8
SHCBP1-202ENST00000563219 CNOT1A5YKK6 2376 aaKnown RBP0.77□□□□□ -2.29
SHCBP1-202ENST00000563219 DEFB108AA8MXU0 73 aa0.77□□□□□ -2.29
SHCBP1-202ENST00000563219 AHCTF1Q8WYP5 2266 aa0.77□□□□□ -2.29
SHCBP1-202ENST00000563219 A0A0D9SG42 100 aa0.76□□□□□ -2.29
SHCBP1-202ENST00000563219 FAM208BQ5VWN6 2430 aa0.76□□□□□ -2.29
SHCBP1-202ENST00000563219 H0YGG7 62 aa0.75□□□□□ -2.29
SHCBP1-202ENST00000563219 KRTAP5-10Q6L8G5 202 aa0.75□□□□□ -2.29
SHCBP1-202ENST00000563219 ZNF462Q96JM2 2506 aa0.75□□□□□ -2.29
SHCBP1-202ENST00000563219 DOPEY2Q9Y3R5 2298 aa0.74□□□□□ -2.29
SHCBP1-202ENST00000563219 JMJD1CQ15652 2540 aa0.74□□□□□ -2.29
SHCBP1-202ENST00000563219 NAV3Q8IVL0 2385 aa0.74□□□□□ -2.29
SHCBP1-202ENST00000563219 PTPRQQ9UMZ3 2332 aa0.73□□□□□ -2.29
SHCBP1-202ENST00000563219 FBN2P35556 2912 aa0.73□□□□□ -2.29
SHCBP1-202ENST00000563219 CHD7Q9P2D1 2997 aa0.72□□□□□ -2.29
SHCBP1-202ENST00000563219 MEGF8Q7Z7M0 2845 aa0.72□□□□□ -2.29
SHCBP1-202ENST00000563219 ZNF469Q96JG9 3925 aaPredicted RBP0.72□□□□□ -2.29
SHCBP1-202ENST00000563219 WNK2Q9Y3S1 2297 aa0.72□□□□□ -2.29
SHCBP1-202ENST00000563219 TRANK1O15050 2925 aa0.71□□□□□ -2.29
SHCBP1-202ENST00000563219 M0QZ58 72 aa0.71□□□□□ -2.3
SHCBP1-202ENST00000563219 DSPP15924 2871 aaKnown RBP0.71□□□□□ -2.3
SHCBP1-202ENST00000563219 NOTCH1P46531 2555 aa0.7□□□□□ -2.3
SHCBP1-202ENST00000563219 H3BUX3 64 aa0.7□□□□□ -2.3
SHCBP1-202ENST00000563219 APELAP0DMC3 54 aa0.7□□□□□ -2.3
SHCBP1-202ENST00000563219 MUC16Q8WXI7 14507 aa0.7□□□□□ -2.3
SHCBP1-202ENST00000563219 USF3Q68DE3 2245 aa0.7□□□□□ -2.3
SHCBP1-202ENST00000563219 REV3LO60673 3130 aa0.7□□□□□ -2.3
SHCBP1-202ENST00000563219 CHD9Q3L8U1 2897 aa0.69□□□□□ -2.3
SHCBP1-202ENST00000563219 KNL1Q8NG31 2342 aa0.69□□□□□ -2.3
SHCBP1-202ENST00000563219 HTN1P15515 57 aa0.69□□□□□ -2.3
SHCBP1-202ENST00000563219 DEFB135Q30KP9 77 aa0.69□□□□□ -2.3
SHCBP1-202ENST00000563219 APCP25054 2843 aa0.69□□□□□ -2.3
SHCBP1-202ENST00000563219 PTPRZ1P23471 2315 aaPredicted RBP0.69□□□□□ -2.3
SHCBP1-202ENST00000563219 PDE4DIPQ5VU43 2346 aa0.69□□□□□ -2.3
SHCBP1-202ENST00000563219 PCNX1Q96RV3 2341 aa0.68□□□□□ -2.3
SHCBP1-202ENST00000563219 VWFP04275 2813 aa0.68□□□□□ -2.3
SHCBP1-202ENST00000563219 PLCE1Q9P212 2302 aa0.67□□□□□ -2.3
SHCBP1-202ENST00000563219 ZNF292O60281 2723 aa0.67□□□□□ -2.3
SHCBP1-202ENST00000563219 OTOGQ6ZRI0 2925 aa0.67□□□□□ -2.3
SHCBP1-202ENST00000563219 TPRP12270 2363 aaKnown RBP0.67□□□□□ -2.3
SHCBP1-202ENST00000563219 TENM2Q9NT68 2774 aa0.67□□□□□ -2.3
SHCBP1-202ENST00000563219 SRRM2Q9UQ35 2752 aaKnown RBP0.67□□□□□ -2.3
SHCBP1-202ENST00000563219 STATHP02808 62 aa0.67□□□□□ -2.3
SHCBP1-202ENST00000563219 SPART-AS1P0CW21 52 aa0.67□□□□□ -2.3
SHCBP1-202ENST00000563219 IGF2RP11717 2491 aa0.67□□□□□ -2.3
SHCBP1-202ENST00000563219 M0R2T5 61 aa0.66□□□□□ -2.3
SHCBP1-202ENST00000563219 TNP1P09430 55 aa0.66□□□□□ -2.3
SHCBP1-202ENST00000563219 SPINK6Q6UWN8 80 aa0.66□□□□□ -2.3
SHCBP1-202ENST00000563219 RHPN1-AS1Q9BWJ2 59 aa0.66□□□□□ -2.3
SHCBP1-202ENST00000563219 CELSR2Q9HCU4 2923 aa0.66□□□□□ -2.3
SHCBP1-202ENST00000563219 PRRC2CQ9Y520 2896 aaKnown RBP0.66□□□□□ -2.3
SHCBP1-202ENST00000563219 CELSR1Q9NYQ6 3014 aa0.65□□□□□ -2.3
SHCBP1-202ENST00000563219 PKDREJQ9NTG1 2253 aa0.65□□□□□ -2.31
SHCBP1-202ENST00000563219 KRTAP19-3Q7Z4W3 81 aa0.65□□□□□ -2.31
SHCBP1-202ENST00000563219 CHD6Q8TD26 2715 aa0.64□□□□□ -2.31
SHCBP1-202ENST00000563219 AKAP13Q12802 2813 aa0.64□□□□□ -2.31
SHCBP1-202ENST00000563219 MUC5BQ9HC84 5762 aaPredicted RBP0.64□□□□□ -2.31
SHCBP1-202ENST00000563219 A0A096LNI7 61 aa0.64□□□□□ -2.31
SHCBP1-202ENST00000563219 C9orf92A6NGG3 77 aa0.64□□□□□ -2.31
SHCBP1-202ENST00000563219 DEFB1P60022 68 aa0.64□□□□□ -2.31
SHCBP1-202ENST00000563219 MGAQ8IWI9 3026 aa0.64□□□□□ -2.31
SHCBP1-202ENST00000563219 GPR98Q8WXG9 6306 aa0.63□□□□□ -2.31
SHCBP1-202ENST00000563219 TENM4Q6N022 2769 aa0.62□□□□□ -2.31
SHCBP1-202ENST00000563219 H3BNG1 76 aa0.62□□□□□ -2.31
SHCBP1-202ENST00000563219 DEFB136Q30KP8 78 aa0.62□□□□□ -2.31
SHCBP1-202ENST00000563219 COX14Q96I36 57 aa0.62□□□□□ -2.31
SHCBP1-202ENST00000563219 C2CD3Q4AC94 2353 aa0.62□□□□□ -2.31
SHCBP1-202ENST00000563219 CSPG4Q6UVK1 2322 aa0.61□□□□□ -2.31
SHCBP1-202ENST00000563219 MYCBP2O75592 4640 aa0.61□□□□□ -2.31
SHCBP1-202ENST00000563219 TENM3Q9P273 2699 aa0.61□□□□□ -2.31
SHCBP1-202ENST00000563219 DEFB108BQ8NET1 73 aa0.61□□□□□ -2.31
SHCBP1-202ENST00000563219 ABCA2Q9BZC7 2435 aa0.61□□□□□ -2.31
SHCBP1-202ENST00000563219 PDZD2O15018 2839 aa0.61□□□□□ -2.31
SHCBP1-202ENST00000563219 COL6A5A8TX70 2615 aa0.6□□□□□ -2.31
SHCBP1-202ENST00000563219 UBR5O95071 2799 aaPredicted RBP0.6□□□□□ -2.31
SHCBP1-202ENST00000563219 DEFB110Q30KQ9 67 aa0.6□□□□□ -2.31
SHCBP1-202ENST00000563219 CRYBG3Q68DQ2 2970 aa0.6□□□□□ -2.31
SHCBP1-202ENST00000563219 Q9Y3F1 56 aa0.6□□□□□ -2.31
SHCBP1-202ENST00000563219 U3KQA8 63 aa0.6□□□□□ -2.31
SHCBP1-202ENST00000563219 FRYQ5TBA9 3013 aa0.6□□□□□ -2.31
SHCBP1-202ENST00000563219 AKAP6Q13023 2319 aa0.6□□□□□ -2.31
SHCBP1-202ENST00000563219 VPS13DQ5THJ4 4388 aa0.59□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 115.2 ms