RNA–Protein interactions for RNA: ENST00000562806.1

CHD9-207, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 3

Gene CHD9, Length 400 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-207ENST00000562806 CDKN2A-AS1Q9UH64 79 aa-0.71□□□□□ -2.52
CHD9-207ENST00000562806 PRDM15P57071 1507 aaPredicted RBP-0.71□□□□□ -2.52
CHD9-207ENST00000562806 ZFYVE16Q7Z3T8 1539 aa-0.72□□□□□ -2.52
CHD9-207ENST00000562806 H3BQF6 201 aa-0.72□□□□□ -2.52
CHD9-207ENST00000562806 DEFB136Q30KP8 78 aa-0.72□□□□□ -2.52
CHD9-207ENST00000562806 C2orf88Q9BSF0 95 aa-0.72□□□□□ -2.52
CHD9-207ENST00000562806 PRO3102Q9H379 93 aa-0.72□□□□□ -2.52
CHD9-207ENST00000562806 CACFD1Q9UGQ2 172 aa-0.72□□□□□ -2.52
CHD9-207ENST00000562806 MLH3Q9UHC1 1453 aa-0.73□□□□□ -2.53
CHD9-207ENST00000562806 NRXN1Q9ULB1 1477 aa-0.73□□□□□ -2.53
CHD9-207ENST00000562806 SAMD9Q5K651 1589 aa-0.73□□□□□ -2.53
CHD9-207ENST00000562806 CEP170BQ9Y4F5 1589 aaPredicted RBP-0.73□□□□□ -2.53
CHD9-207ENST00000562806 TRBV25-1A0A075B6N4 114 aa-0.73□□□□□ -2.53
CHD9-207ENST00000562806 LCE6AA0A183 80 aa-0.73□□□□□ -2.53
CHD9-207ENST00000562806 KRTDAPP60985 99 aa-0.73□□□□□ -2.53
CHD9-207ENST00000562806 GNG8Q9UK08 70 aa-0.73□□□□□ -2.53
CHD9-207ENST00000562806 ABCC10Q5T3U5 1492 aa-0.73□□□□□ -2.53
CHD9-207ENST00000562806 IGLV5-48A0A075B6I7 105 aa-0.74□□□□□ -2.53
CHD9-207ENST00000562806 CCL22O00626 93 aa-0.74□□□□□ -2.53
CHD9-207ENST00000562806 ARMS2P0C7Q2 107 aa-0.74□□□□□ -2.53
CHD9-207ENST00000562806 GNGT1P63211 74 aa-0.74□□□□□ -2.53
CHD9-207ENST00000562806 PSMG4Q5JS54 123 aa-0.74□□□□□ -2.53
CHD9-207ENST00000562806 COX6B2Q6YFQ2 88 aa-0.74□□□□□ -2.53
CHD9-207ENST00000562806 ALKQ9UM73 1620 aa-0.75□□□□□ -2.53
CHD9-207ENST00000562806 TIAM2Q8IVF5 1701 aa-0.75□□□□□ -2.53
CHD9-207ENST00000562806 RGPD2P0DJD1 1756 aa-0.75□□□□□ -2.53
CHD9-207ENST00000562806 LINC01546A6NGU7 62 aa-0.75□□□□□ -2.53
CHD9-207ENST00000562806 NDUFA3O95167 84 aa-0.75□□□□□ -2.53
CHD9-207ENST00000562806 HEPN1Q6WQI6 88 aa-0.75□□□□□ -2.53
CHD9-207ENST00000562806 TMEM203Q969S6 136 aa-0.75□□□□□ -2.53
CHD9-207ENST00000562806 VAMP8Q9BV40 100 aa-0.75□□□□□ -2.53
CHD9-207ENST00000562806 UBE2D4Q9Y2X8 147 aa-0.75□□□□□ -2.53
CHD9-207ENST00000562806 CLIP1P30622 1438 aa-0.75□□□□□ -2.53
CHD9-207ENST00000562806 ASXL1Q8IXJ9 1541 aa-0.75□□□□□ -2.53
CHD9-207ENST00000562806 FAM135AQ9P2D6 1515 aa-0.75□□□□□ -2.53
CHD9-207ENST00000562806 SMARCA2P51531 1590 aa-0.75□□□□□ -2.53
CHD9-207ENST00000562806 MAST1Q9Y2H9 1570 aa-0.75□□□□□ -2.53
CHD9-207ENST00000562806 TRAV30A0A087WSZ9 112 aa-0.76□□□□□ -2.53
CHD9-207ENST00000562806 TRBV7-7A0A0K0K1E9 115 aa-0.76□□□□□ -2.53
CHD9-207ENST00000562806 SPTY2D1-AS1A0A0U1RR47 76 aa-0.76□□□□□ -2.53
CHD9-207ENST00000562806 A8MTW9 85 aa-0.76□□□□□ -2.53
CHD9-207ENST00000562806 LYNX1G3V0Z9 82 aa-0.76□□□□□ -2.53
CHD9-207ENST00000562806 GNGT2O14610 69 aa-0.76□□□□□ -2.53
CHD9-207ENST00000562806 DEFB130BP0DP73 79 aa-0.76□□□□□ -2.53
CHD9-207ENST00000562806 DEFB130AP0DP74 79 aa-0.76□□□□□ -2.53
CHD9-207ENST00000562806 PMCHL1Q16048 86 aa-0.76□□□□□ -2.53
CHD9-207ENST00000562806 TRGV9Q99603 122 aa-0.76□□□□□ -2.53
CHD9-207ENST00000562806 ANKRD36BQ8N2N9 1353 aa-0.76□□□□□ -2.53
CHD9-207ENST00000562806 WIZO95785 1651 aa-0.76□□□□□ -2.53
CHD9-207ENST00000562806 PREX1Q8TCU6 1659 aa-0.76□□□□□ -2.53
CHD9-207ENST00000562806 QSER1Q2KHR3 1735 aa-0.76□□□□□ -2.53
CHD9-207ENST00000562806 UTRNP46939 3433 aa-0.76□□□□□ -2.53
CHD9-207ENST00000562806 XIRP2A4UGR9 3374 aa-0.77□□□□□ -2.53
CHD9-207ENST00000562806 CRYBG1Q9Y4K1 1723 aa-0.77□□□□□ -2.53
CHD9-207ENST00000562806 ZNF831Q5JPB2 1677 aa-0.77□□□□□ -2.53
CHD9-207ENST00000562806 RAPGEF2Q9Y4G8 1499 aa-0.77□□□□□ -2.53
CHD9-207ENST00000562806 M0QZ58 72 aa-0.77□□□□□ -2.53
CHD9-207ENST00000562806 NDUFC1O43677 76 aa-0.77□□□□□ -2.53
CHD9-207ENST00000562806 MT-ATP8P03928 68 aa-0.77□□□□□ -2.53
CHD9-207ENST00000562806 UQCRHP07919 91 aa-0.77□□□□□ -2.53
CHD9-207ENST00000562806 C3orf79P0CE67 100 aa-0.77□□□□□ -2.53
CHD9-207ENST00000562806 NMSQ5H8A3 153 aa-0.77□□□□□ -2.53
CHD9-207ENST00000562806 GTF2H5Q6ZYL4 71 aa-0.77□□□□□ -2.53
CHD9-207ENST00000562806 LEAP2Q969E1 77 aa-0.77□□□□□ -2.53
CHD9-207ENST00000562806 KIF20BQ96Q89 1820 aa-0.78□□□□□ -2.53
CHD9-207ENST00000562806 C4AP0C0L4 1744 aa-0.78□□□□□ -2.53
CHD9-207ENST00000562806 C4BP0C0L5 1744 aa-0.78□□□□□ -2.53
CHD9-207ENST00000562806 PLXNC1O60486 1568 aa-0.78□□□□□ -2.53
CHD9-207ENST00000562806 SPART-AS1P0CW21 52 aa-0.78□□□□□ -2.53
CHD9-207ENST00000562806 MRPS10P82664 201 aaKnown RBP-0.78□□□□□ -2.53
CHD9-207ENST00000562806 DEFB106AQ8N104 65 aa-0.78□□□□□ -2.53
CHD9-207ENST00000562806 PSENENQ9NZ42 101 aa-0.78□□□□□ -2.53
CHD9-207ENST00000562806 SCN11AQ9UI33 1791 aa-0.78□□□□□ -2.53
CHD9-207ENST00000562806 PKD1L3Q7Z443 1732 aa-0.78□□□□□ -2.53
CHD9-207ENST00000562806 TOGARAM1Q9Y4F4 1720 aa-0.78□□□□□ -2.53
CHD9-207ENST00000562806 DNMBPQ6XZF7 1577 aa-0.79□□□□□ -2.54
CHD9-207ENST00000562806 ABCC2Q92887 1545 aa-0.79□□□□□ -2.54
CHD9-207ENST00000562806 ATP7BP35670 1465 aa-0.79□□□□□ -2.54
CHD9-207ENST00000562806 IGLC2P0DOY2 106 aa-0.79□□□□□ -2.54
CHD9-207ENST00000562806 IGLC3P0DOY3 106 aa-0.79□□□□□ -2.54
CHD9-207ENST00000562806 LINC00158P58513 81 aa-0.79□□□□□ -2.54
CHD9-207ENST00000562806 WT1-ASQ06250 92 aa-0.79□□□□□ -2.54
CHD9-207ENST00000562806 PMCHL2Q9BQD1 86 aa-0.79□□□□□ -2.54
CHD9-207ENST00000562806 TIMM8BQ9Y5J9 83 aaPredicted RBP-0.79□□□□□ -2.54
CHD9-207ENST00000562806 CROCC2H7BZ55 1655 aa-0.79□□□□□ -2.54
CHD9-207ENST00000562806 CLTCQ00610 1675 aaKnown RBP-0.79□□□□□ -2.54
CHD9-207ENST00000562806 PIK3C2BO00750 1634 aa-0.79□□□□□ -2.54
CHD9-207ENST00000562806 MED14O60244 1454 aa-0.8□□□□□ -2.54
CHD9-207ENST00000562806 RGPD1P0DJD0 1748 aa-0.8□□□□□ -2.54
CHD9-207ENST00000562806 C20orf202A1L168 122 aa-0.8□□□□□ -2.54
CHD9-207ENST00000562806 F8WEM9 126 aa-0.8□□□□□ -2.54
CHD9-207ENST00000562806 MPC2O95563 127 aa-0.8□□□□□ -2.54
CHD9-207ENST00000562806 SERP2Q8N6R1 65 aa-0.8□□□□□ -2.54
CHD9-207ENST00000562806 RGPD8O14715 1765 aaPredicted RBP-0.8□□□□□ -2.54
CHD9-207ENST00000562806 RGPD5Q99666 1765 aa-0.8□□□□□ -2.54
CHD9-207ENST00000562806 LY75O60449 1722 aa-0.81□□□□□ -2.54
CHD9-207ENST00000562806 DEPDC5O75140 1603 aa-0.81□□□□□ -2.54
CHD9-207ENST00000562806 GOLGB1Q14789 3259 aaKnown RBP-0.81□□□□□ -2.54
CHD9-207ENST00000562806 IFI6P09912 130 aa-0.81□□□□□ -2.54
CHD9-207ENST00000562806 IAPPP10997 89 aa-0.81□□□□□ -2.54
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms