RNA–Protein interactions for RNA: ENST00000562626.1

CLK3-208, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 812 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-208ENST00000562626 Q8NBF4 154 aa5.66□□□□□ -1.5
CLK3-208ENST00000562626 NAA38Q9BRA0 125 aaKnown RBP5.66□□□□□ -1.5
CLK3-208ENST00000562626 A0A0G2JQZ4 141 aa5.65□□□□□ -1.5
CLK3-208ENST00000562626 LINC00304Q8N9R0 145 aa5.65□□□□□ -1.5
CLK3-208ENST00000562626 MUC2Q02817 5179 aa5.65□□□□□ -1.51
CLK3-208ENST00000562626 TEX49A0A1B0GTD5 131 aa5.64□□□□□ -1.51
CLK3-208ENST00000562626 H0YGX0 51 aa5.63□□□□□ -1.51
CLK3-208ENST00000562626 SLC25A20O43772 301 aa5.63□□□□□ -1.51
CLK3-208ENST00000562626 BATFQ16520 125 aa5.63□□□□□ -1.51
CLK3-208ENST00000562626 C9orf153Q5TBE3 101 aa5.63□□□□□ -1.51
CLK3-208ENST00000562626 FAT4Q6V0I7 4981 aa5.62□□□□□ -1.51
CLK3-208ENST00000562626 PSMB2P49721 201 aa5.62□□□□□ -1.51
CLK3-208ENST00000562626 UBE2V1Q13404 147 aa5.62□□□□□ -1.51
CLK3-208ENST00000562626 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.62□□□□□ -1.51
CLK3-208ENST00000562626 RETNLBQ9BQ08 111 aa5.61□□□□□ -1.51
CLK3-208ENST00000562626 LAMTOR3Q9UHA4 124 aa5.61□□□□□ -1.51
CLK3-208ENST00000562626 LPAP08519 4548 aa5.6□□□□□ -1.51
CLK3-208ENST00000562626 K7ERU9 68 aa5.6□□□□□ -1.51
CLK3-208ENST00000562626 C21orf62-AS1Q17RA5 79 aa5.6□□□□□ -1.51
CLK3-208ENST00000562626 SSBP3-AS1Q7Z2R9 100 aa5.6□□□□□ -1.51
CLK3-208ENST00000562626 TAX1BP3O14907 124 aa5.58□□□□□ -1.52
CLK3-208ENST00000562626 HRCT1Q6UXD1 115 aa5.58□□□□□ -1.52
CLK3-208ENST00000562626 LRP2P98164 4655 aa5.57□□□□□ -1.52
CLK3-208ENST00000562626 A0A1B0GX51 115 aa5.57□□□□□ -1.52
CLK3-208ENST00000562626 LST1O00453 97 aa5.57□□□□□ -1.52
CLK3-208ENST00000562626 TCL1BO95988 128 aa5.57□□□□□ -1.52
CLK3-208ENST00000562626 H3BUT2 72 aa5.56□□□□□ -1.52
CLK3-208ENST00000562626 SCGB1C2P0DMR2 95 aa5.56□□□□□ -1.52
CLK3-208ENST00000562626 VPS25Q9BRG1 176 aa5.56□□□□□ -1.52
CLK3-208ENST00000562626 IGLV8-61A0A075B6I0 122 aa5.55□□□□□ -1.52
CLK3-208ENST00000562626 COX6CP09669 75 aa5.55□□□□□ -1.52
CLK3-208ENST00000562626 SPAG11AQ6PDA7 123 aa5.55□□□□□ -1.52
CLK3-208ENST00000562626 IGFL1Q6UW32 110 aa5.55□□□□□ -1.52
CLK3-208ENST00000562626 SPINK1P00995 79 aa5.54□□□□□ -1.52
CLK3-208ENST00000562626 TRACP01848 142 aa5.54□□□□□ -1.52
CLK3-208ENST00000562626 NDUFV3P56181 108 aaKnown RBP5.54□□□□□ -1.52
CLK3-208ENST00000562626 OCIAD2Q56VL3 154 aa5.54□□□□□ -1.52
CLK3-208ENST00000562626 C4orf48Q5BLP8 95 aa5.54□□□□□ -1.52
CLK3-208ENST00000562626 GTF2H5Q6ZYL4 71 aa5.54□□□□□ -1.52
CLK3-208ENST00000562626 PPDPFLQ8WWR9 84 aa5.54□□□□□ -1.52
CLK3-208ENST00000562626 A0A1B0GV72 72 aa5.53□□□□□ -1.52
CLK3-208ENST00000562626 C9orf118A6NHY6 69 aa5.53□□□□□ -1.52
CLK3-208ENST00000562626 FABP2P12104 132 aa5.53□□□□□ -1.52
CLK3-208ENST00000562626 PRR4Q16378 134 aa5.53□□□□□ -1.52
CLK3-208ENST00000562626 ORMDL1Q9P0S3 153 aa5.53□□□□□ -1.52
CLK3-208ENST00000562626 F8WEM9 126 aa5.52□□□□□ -1.53
CLK3-208ENST00000562626 DNAL4O96015 105 aa5.52□□□□□ -1.53
CLK3-208ENST00000562626 SCGB1A1P11684 91 aa5.52□□□□□ -1.53
CLK3-208ENST00000562626 RPS29P62273 56 aaKnown RBP5.51□□□□□ -1.53
CLK3-208ENST00000562626 CD164Q04900 197 aa5.51□□□□□ -1.53
CLK3-208ENST00000562626 SVIPQ8NHG7 77 aa5.51□□□□□ -1.53
CLK3-208ENST00000562626 A0A1W2PPM0 123 aa5.5□□□□□ -1.53
CLK3-208ENST00000562626 SNCGO76070 127 aa5.5□□□□□ -1.53
CLK3-208ENST00000562626 H3BMG7 143 aa5.49□□□□□ -1.53
CLK3-208ENST00000562626 J3QR89 54 aa5.49□□□□□ -1.53
CLK3-208ENST00000562626 ATXN8Q156A1 80 aa5.49□□□□□ -1.53
CLK3-208ENST00000562626 Q6JHZ5 121 aa5.49□□□□□ -1.53
CLK3-208ENST00000562626 MTURNQ8N3F0 131 aa5.49□□□□□ -1.53
CLK3-208ENST00000562626 A0A1W2PNM2 257 aa5.48□□□□□ -1.53
CLK3-208ENST00000562626 BAALC-AS2P0C853 105 aa5.48□□□□□ -1.53
CLK3-208ENST00000562626 FSIP2Q5CZC0 6907 aa5.48□□□□□ -1.53
CLK3-208ENST00000562626 IGLV7-46A0A075B6I9 117 aa5.47□□□□□ -1.53
CLK3-208ENST00000562626 TRBV7-7A0A0K0K1E9 115 aa5.47□□□□□ -1.53
CLK3-208ENST00000562626 TMEM256-PLSCR3K7ERE1 68 aa5.47□□□□□ -1.53
CLK3-208ENST00000562626 C9JAW5 83 aa5.46□□□□□ -1.54
CLK3-208ENST00000562626 CRCT1Q9UGL9 99 aa5.46□□□□□ -1.54
CLK3-208ENST00000562626 C1orf195Q5TG92 126 aa5.45□□□□□ -1.54
CLK3-208ENST00000562626 Q5XG85 94 aa5.45□□□□□ -1.54
CLK3-208ENST00000562626 ANKRD29Q8N6D5 301 aa5.45□□□□□ -1.54
CLK3-208ENST00000562626 LIMD2Q9BT23 127 aa5.45□□□□□ -1.54
CLK3-208ENST00000562626 TRBV20-1A0A075B6N2 111 aa5.44□□□□□ -1.54
CLK3-208ENST00000562626 KRTAP13-3Q3SY46 172 aa5.44□□□□□ -1.54
CLK3-208ENST00000562626 LYRM7Q5U5X0 104 aa5.44□□□□□ -1.54
CLK3-208ENST00000562626 FP248Q71RG6 208 aaPredicted RBP5.44□□□□□ -1.54
CLK3-208ENST00000562626 TRBV7-4A0A0J9YYF1 115 aa5.43□□□□□ -1.54
CLK3-208ENST00000562626 GHRHP01286 108 aa5.43□□□□□ -1.54
CLK3-208ENST00000562626 Q6Q795 121 aa5.43□□□□□ -1.54
CLK3-208ENST00000562626 SPCS1Q9Y6A9 102 aa5.43□□□□□ -1.54
CLK3-208ENST00000562626 H3BQ85 93 aa5.42□□□□□ -1.54
CLK3-208ENST00000562626 SMCPP49901 116 aaPredicted RBP5.42□□□□□ -1.54
CLK3-208ENST00000562626 TPRXLQ17RH7 258 aa5.42□□□□□ -1.54
CLK3-208ENST00000562626 TEN1Q86WV5 123 aa5.42□□□□□ -1.54
CLK3-208ENST00000562626 A0A087WSZ3 146 aa5.41□□□□□ -1.54
CLK3-208ENST00000562626 K7EP34 96 aa5.41□□□□□ -1.54
CLK3-208ENST00000562626 Q96NJ1 140 aa5.41□□□□□ -1.54
CLK3-208ENST00000562626 MUC17Q685J3 4493 aa5.4□□□□□ -1.54
CLK3-208ENST00000562626 RBM3P98179 157 aaKnown RBP5.4□□□□□ -1.54
CLK3-208ENST00000562626 ASB16-AS1Q495Z4 193 aa5.4□□□□□ -1.54
CLK3-208ENST00000562626 OBSCN-AS1Q96MR7 158 aa5.4□□□□□ -1.54
CLK3-208ENST00000562626 PRO0461Q9UI25 63 aa5.4□□□□□ -1.54
CLK3-208ENST00000562626 CCKP06307 115 aa5.39□□□□□ -1.55
CLK3-208ENST00000562626 SIGMAR1Q99720 223 aa5.39□□□□□ -1.55
CLK3-208ENST00000562626 C14orf132Q9NPU4 83 aa5.39□□□□□ -1.55
CLK3-208ENST00000562626 C9orf92A6NGG3 77 aa5.38□□□□□ -1.55
CLK3-208ENST00000562626 H3BT86 120 aa5.38□□□□□ -1.55
CLK3-208ENST00000562626 Q6ZQT0 140 aa5.38□□□□□ -1.55
CLK3-208ENST00000562626 F8W1H4 67 aa5.37□□□□□ -1.55
CLK3-208ENST00000562626 LOC110117498A0A087WWA1 95 aa5.36□□□□□ -1.55
CLK3-208ENST00000562626 XP32Q5T750 250 aa5.36□□□□□ -1.55
CLK3-208ENST00000562626 DSCR8Q96T75 97 aa5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms