RNA–Protein interactions for RNA: ENST00000561869.1

CHD9-204, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 2

Gene CHD9, Length 720 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-204ENST00000561869 LAMA2P24043 3122 aaKnown RBP-0.39□□□□□ -2.47
CHD9-204ENST00000561869 POLR1AO95602 1720 aaPredicted RBP-0.39□□□□□ -2.47
CHD9-204ENST00000561869 TACC2O95359 2948 aa-0.4□□□□□ -2.47
CHD9-204ENST00000561869 TRAV21A0A0B4J279 112 aa-0.4□□□□□ -2.47
CHD9-204ENST00000561869 NDUFA3O95167 84 aa-0.4□□□□□ -2.47
CHD9-204ENST00000561869 LINC00643Q86TS7 51 aa-0.4□□□□□ -2.47
CHD9-204ENST00000561869 S100A16Q96FQ6 103 aaKnown RBP-0.4□□□□□ -2.47
CHD9-204ENST00000561869 CUBNO60494 3623 aa-0.4□□□□□ -2.47
CHD9-204ENST00000561869 LAMA3Q16787 3333 aa-0.4□□□□□ -2.47
CHD9-204ENST00000561869 DNAH11Q96DT5 4516 aa-0.4□□□□□ -2.47
CHD9-204ENST00000561869 TNRC6CQ9HCJ0 1690 aaKnown RBP-0.4□□□□□ -2.47
CHD9-204ENST00000561869 NIPBLQ6KC79 2804 aaeCLIP-0.41□□□□□ -2.47
CHD9-204ENST00000561869 C4AP0C0L4 1744 aa-0.41□□□□□ -2.47
CHD9-204ENST00000561869 C4BP0C0L5 1744 aa-0.41□□□□□ -2.47
CHD9-204ENST00000561869 MAP3K4Q9Y6R4 1608 aa-0.41□□□□□ -2.47
CHD9-204ENST00000561869 DNHD1Q96M86 4753 aa-0.41□□□□□ -2.47
CHD9-204ENST00000561869 Q9H521 79 aa-0.41□□□□□ -2.48
CHD9-204ENST00000561869 KIF14Q15058 1648 aa-0.42□□□□□ -2.48
CHD9-204ENST00000561869 PPLO60437 1756 aa-0.42□□□□□ -2.48
CHD9-204ENST00000561869 LTN1O94822 1766 aa-0.42□□□□□ -2.48
CHD9-204ENST00000561869 MAGI3Q5TCQ9 1506 aa-0.42□□□□□ -2.48
CHD9-204ENST00000561869 WIZO95785 1651 aa-0.42□□□□□ -2.48
CHD9-204ENST00000561869 SPRR2FQ96RM1 72 aa-0.42□□□□□ -2.48
CHD9-204ENST00000561869 PLXNC1O60486 1568 aa-0.42□□□□□ -2.48
CHD9-204ENST00000561869 NWD1Q149M9 1564 aa-0.42□□□□□ -2.48
CHD9-204ENST00000561869 VPS13BQ7Z7G8 4022 aa-0.42□□□□□ -2.48
CHD9-204ENST00000561869 DOT1LQ8TEK3 1739 aa-0.42□□□□□ -2.48
CHD9-204ENST00000561869 ZNF831Q5JPB2 1677 aa-0.43□□□□□ -2.48
CHD9-204ENST00000561869 URB2Q14146 1524 aaKnown RBP-0.43□□□□□ -2.48
CHD9-204ENST00000561869 SACSQ9NZJ4 4579 aa-0.43□□□□□ -2.48
CHD9-204ENST00000561869 TRIOO75962 3097 aa-0.43□□□□□ -2.48
CHD9-204ENST00000561869 LAMA1P25391 3075 aa-0.43□□□□□ -2.48
CHD9-204ENST00000561869 DNAH1Q9P2D7 4330 aa-0.43□□□□□ -2.48
CHD9-204ENST00000561869 DMXL1Q9Y485 3027 aa-0.43□□□□□ -2.48
CHD9-204ENST00000561869 CEBPZOSA8MTT3 80 aa-0.43□□□□□ -2.48
CHD9-204ENST00000561869 H0YGG7 62 aa-0.43□□□□□ -2.48
CHD9-204ENST00000561869 NDUFB1O75438 58 aa-0.43□□□□□ -2.48
CHD9-204ENST00000561869 ACYP1P07311 99 aa-0.43□□□□□ -2.48
CHD9-204ENST00000561869 NESP48681 1621 aa-0.43□□□□□ -2.48
CHD9-204ENST00000561869 CMYA5Q8N3K9 4069 aa-0.43□□□□□ -2.48
CHD9-204ENST00000561869 NCOA2Q15596 1464 aa-0.43□□□□□ -2.48
CHD9-204ENST00000561869 KALRNO60229 2985 aa-0.43□□□□□ -2.48
CHD9-204ENST00000561869 BPTFQ12830 3046 aa-0.43□□□□□ -2.48
CHD9-204ENST00000561869 DYNC1H1Q14204 4646 aaKnown RBP-0.44□□□□□ -2.48
CHD9-204ENST00000561869 CELSR3Q9NYQ7 3312 aa-0.44□□□□□ -2.48
CHD9-204ENST00000561869 ITPR3Q14573 2671 aa-0.44□□□□□ -2.48
CHD9-204ENST00000561869 LCE6AA0A183 80 aa-0.44□□□□□ -2.48
CHD9-204ENST00000561869 MT1AP04731 61 aa-0.44□□□□□ -2.48
CHD9-204ENST00000561869 WFDC9Q8NEX5 89 aa-0.44□□□□□ -2.48
CHD9-204ENST00000561869 ITPR1Q14643 2758 aa-0.44□□□□□ -2.48
CHD9-204ENST00000561869 PLECQ15149 4684 aaKnown RBP-0.44□□□□□ -2.48
CHD9-204ENST00000561869 DIP2BQ9P265 1576 aa-0.45□□□□□ -2.48
CHD9-204ENST00000561869 DNAH8Q96JB1 4490 aa-0.45□□□□□ -2.48
CHD9-204ENST00000561869 CCDC168Q8NDH2 2452 aa-0.45□□□□□ -2.48
CHD9-204ENST00000561869 CCDC88BA6NC98 1476 aa-0.45□□□□□ -2.48
CHD9-204ENST00000561869 C3orf79P0CE67 100 aa-0.45□□□□□ -2.48
CHD9-204ENST00000561869 KRTAP19-6Q3LI70 58 aa-0.45□□□□□ -2.48
CHD9-204ENST00000561869 TDRG1Q3Y452 100 aa-0.45□□□□□ -2.48
CHD9-204ENST00000561869 UACAQ9BZF9 1416 aa-0.46□□□□□ -2.48
CHD9-204ENST00000561869 PIK3C2BO00750 1634 aa-0.46□□□□□ -2.48
CHD9-204ENST00000561869 ARFGEF2Q9Y6D5 1785 aa-0.47□□□□□ -2.48
CHD9-204ENST00000561869 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP-0.47□□□□□ -2.48
CHD9-204ENST00000561869 DNAH7Q8WXX0 4024 aa-0.47□□□□□ -2.48
CHD9-204ENST00000561869 PRO3102Q9H379 93 aa-0.47□□□□□ -2.48
CHD9-204ENST00000561869 WDR87Q6ZQQ6 2873 aa-0.47□□□□□ -2.48
CHD9-204ENST00000561869 RELNP78509 3460 aa-0.47□□□□□ -2.49
CHD9-204ENST00000561869 MED14O60244 1454 aa-0.48□□□□□ -2.49
CHD9-204ENST00000561869 DEPDC5O75140 1603 aa-0.48□□□□□ -2.49
CHD9-204ENST00000561869 KANTRA0A1W2PQU2 76 aa-0.48□□□□□ -2.49
CHD9-204ENST00000561869 H0YAA0 97 aa-0.48□□□□□ -2.49
CHD9-204ENST00000561869 LINC00158P58513 81 aa-0.48□□□□□ -2.49
CHD9-204ENST00000561869 A0A0C4DFX4 3053 aa-0.48□□□□□ -2.49
CHD9-204ENST00000561869 GCN1Q92616 2671 aaKnown RBP-0.48□□□□□ -2.49
CHD9-204ENST00000561869 MTORP42345 2549 aa-0.48□□□□□ -2.49
CHD9-204ENST00000561869 RB1CC1Q8TDY2 1594 aa-0.49□□□□□ -2.49
CHD9-204ENST00000561869 SCN11AQ9UI33 1791 aa-0.49□□□□□ -2.49
CHD9-204ENST00000561869 C9orf92A6NGG3 77 aa-0.49□□□□□ -2.49
CHD9-204ENST00000561869 UMAD1C9J7I0 102 aa-0.49□□□□□ -2.49
CHD9-204ENST00000561869 LYNX1G3V0Z9 82 aa-0.49□□□□□ -2.49
CHD9-204ENST00000561869 IFI6P09912 130 aa-0.49□□□□□ -2.49
CHD9-204ENST00000561869 GNG2P59768 71 aa-0.49□□□□□ -2.49
CHD9-204ENST00000561869 DEFB121Q5J5C9 76 aa-0.49□□□□□ -2.49
CHD9-204ENST00000561869 MYO15AQ9UKN7 3530 aa-0.49□□□□□ -2.49
CHD9-204ENST00000561869 DNAH17Q9UFH2 4485 aa-0.49□□□□□ -2.49
CHD9-204ENST00000561869 CEP290O15078 2479 aa-0.49□□□□□ -2.49
CHD9-204ENST00000561869 RANBP2P49792 3224 aaKnown RBP-0.5□□□□□ -2.49
CHD9-204ENST00000561869 FAM186AA6NE01 2351 aa-0.5□□□□□ -2.49
CHD9-204ENST00000561869 LRRK2Q5S007 2527 aa-0.5□□□□□ -2.49
CHD9-204ENST00000561869 IFI27P40305 119 aaPredicted RBP-0.5□□□□□ -2.49
CHD9-204ENST00000561869 ATP5EP2Q5VTU8 51 aa-0.5□□□□□ -2.49
CHD9-204ENST00000561869 UTP20O75691 2785 aaKnown RBP-0.5□□□□□ -2.49
CHD9-204ENST00000561869 NBEAQ8NFP9 2946 aa-0.5□□□□□ -2.49
CHD9-204ENST00000561869 H3BNG1 76 aa-0.51□□□□□ -2.49
CHD9-204ENST00000561869 ST20Q9HBF5 79 aa-0.51□□□□□ -2.49
CHD9-204ENST00000561869 SPTBN5Q9NRC6 3674 aaKnown RBP-0.52□□□□□ -2.49
CHD9-204ENST00000561869 MAP3K1Q13233 1512 aa-0.52□□□□□ -2.49
CHD9-204ENST00000561869 TEX15Q9BXT5 2789 aa-0.52□□□□□ -2.49
CHD9-204ENST00000561869 CEP295Q9C0D2 2601 aa-0.52□□□□□ -2.49
CHD9-204ENST00000561869 NDUFA4O00483 81 aa-0.52□□□□□ -2.49
CHD9-204ENST00000561869 HMGA1P17096 107 aaKnown RBP-0.52□□□□□ -2.49
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms