RNA–Protein interactions for RNA: ENST00000561637.5

NME3-202, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 1,014 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-202ENST00000561637 SCGB1D1O95968 90 aa13.68□□□□□ -0.22
NME3-202ENST00000561637 Q6ZQY7 126 aa13.67□□□□□ -0.22
NME3-202ENST00000561637 VAMP3Q15836 100 aa13.65□□□□□ -0.22
NME3-202ENST00000561637 hADV29S1A0JD25 119 aa13.63□□□□□ -0.23
NME3-202ENST00000561637 HIST1H4GQ99525 98 aa13.62□□□□□ -0.23
NME3-202ENST00000561637 IGLV8-61A0A075B6I0 122 aa13.61□□□□□ -0.23
NME3-202ENST00000561637 COX8AP10176 69 aa13.61□□□□□ -0.23
NME3-202ENST00000561637 F8WEM9 126 aa13.59□□□□□ -0.23
NME3-202ENST00000561637 LORP23490 312 aaPredicted RBP13.57□□□□□ -0.24
NME3-202ENST00000561637 CFC1BP0CG36 223 aa13.56□□□□□ -0.24
NME3-202ENST00000561637 IGFL1Q6UW32 110 aa13.56□□□□□ -0.24
NME3-202ENST00000561637 C14orf144Q96I85 54 aa13.56□□□□□ -0.24
NME3-202ENST00000561637 KRTAP10-6P60371 365 aaPredicted RBP13.53□□□□□ -0.24
NME3-202ENST00000561637 TCL1BO95988 128 aa13.52□□□□□ -0.25
NME3-202ENST00000561637 DLEU1O43261 78 aa13.51□□□□□ -0.25
NME3-202ENST00000561637 CFC1P0CG37 223 aa13.51□□□□□ -0.25
NME3-202ENST00000561637 OCIAD2Q56VL3 154 aa13.51□□□□□ -0.25
NME3-202ENST00000561637 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP13.51□□□□□ -0.25
NME3-202ENST00000561637 PAM16Q9Y3D7 125 aa13.51□□□□□ -0.25
NME3-202ENST00000561637 CLEC2BQ92478 149 aa13.5□□□□□ -0.25
NME3-202ENST00000561637 TRBV7-7A0A0K0K1E9 115 aa13.49□□□□□ -0.25
NME3-202ENST00000561637 H3BUT2 72 aa13.49□□□□□ -0.25
NME3-202ENST00000561637 RPL37P61927 97 aaKnown RBP13.49□□□□□ -0.25
NME3-202ENST00000561637 Q6JHZ5 121 aa13.49□□□□□ -0.25
NME3-202ENST00000561637 SPATA45Q537H7 98 aa13.48□□□□□ -0.25
NME3-202ENST00000561637 C2orf91Q6ZV80 131 aa13.48□□□□□ -0.25
NME3-202ENST00000561637 BVES-AS1Q5T3Y7 98 aa13.47□□□□□ -0.25
NME3-202ENST00000561637 FAM218AQ96MZ4 157 aa13.45□□□□□ -0.26
NME3-202ENST00000561637 RAB37Q96AX2 223 aa13.42□□□□□ -0.26
NME3-202ENST00000561637 SNHG12Q9BXW3 62 aa13.42□□□□□ -0.26
NME3-202ENST00000561637 HIGD1BQ9P298 99 aa13.42□□□□□ -0.26
NME3-202ENST00000561637 A0A0B4J2C4 111 aa13.39□□□□□ -0.27
NME3-202ENST00000561637 PPDPFLQ8WWR9 84 aa13.39□□□□□ -0.27
NME3-202ENST00000561637 VAMP8Q9BV40 100 aa13.39□□□□□ -0.27
NME3-202ENST00000561637 KRTAP9-7A8MTY7 169 aa13.38□□□□□ -0.27
NME3-202ENST00000561637 FLGP20930 4061 aaPredicted RBP13.34□□□□□ -0.27
NME3-202ENST00000561637 OBSCN-AS1Q96MR7 158 aa13.34□□□□□ -0.27
NME3-202ENST00000561637 CEND1Q8N111 149 aa13.33□□□□□ -0.28
NME3-202ENST00000561637 KRTAP9-1A8MXZ3 250 aaPredicted RBP13.32□□□□□ -0.28
NME3-202ENST00000561637 FXYD2P54710 66 aa13.32□□□□□ -0.28
NME3-202ENST00000561637 H0YGX0 51 aa13.3□□□□□ -0.28
NME3-202ENST00000561637 M0R2T5 61 aa13.3□□□□□ -0.28
NME3-202ENST00000561637 NDUFV3P56181 108 aaKnown RBP13.29□□□□□ -0.28
NME3-202ENST00000561637 LST1O00453 97 aa13.28□□□□□ -0.28
NME3-202ENST00000561637 PRO1854Q9UHT4 67 aa13.27□□□□□ -0.29
NME3-202ENST00000561637 TRIAP1O43715 76 aa13.24□□□□□ -0.29
NME3-202ENST00000561637 Q6Q795 121 aa13.23□□□□□ -0.29
NME3-202ENST00000561637 A0A087WSZ3 146 aa13.21□□□□□ -0.29
NME3-202ENST00000561637 FABP2P12104 132 aa13.21□□□□□ -0.29
NME3-202ENST00000561637 PYY3Q5JQD4 70 aa13.21□□□□□ -0.29
NME3-202ENST00000561637 Q75L30 129 aa13.21□□□□□ -0.29
NME3-202ENST00000561637 H3BMG7 143 aa13.2□□□□□ -0.3
NME3-202ENST00000561637 K7ERJ3 54 aa13.2□□□□□ -0.3
NME3-202ENST00000561637 COX6B2Q6YFQ2 88 aa13.2□□□□□ -0.3
NME3-202ENST00000561637 TEN1Q86WV5 123 aa13.2□□□□□ -0.3
NME3-202ENST00000561637 TMEM238LA0A1B0GVL6 79 aa13.19□□□□□ -0.3
NME3-202ENST00000561637 A6NJY4 79 aa13.19□□□□□ -0.3
NME3-202ENST00000561637 SNCGO76070 127 aa13.19□□□□□ -0.3
NME3-202ENST00000561637 Q96NJ1 140 aa13.18□□□□□ -0.3
NME3-202ENST00000561637 A0A1W2PNM2 257 aa13.17□□□□□ -0.3
NME3-202ENST00000561637 SS18L2Q9UHA2 77 aa13.17□□□□□ -0.3
NME3-202ENST00000561637 A0A1B0GV72 72 aa13.16□□□□□ -0.3
NME3-202ENST00000561637 A0A1B0GX51 115 aa13.15□□□□□ -0.3
NME3-202ENST00000561637 ATP11AUNQ6ZP68 121 aa13.14□□□□□ -0.31
NME3-202ENST00000561637 HSD52Q0P140 79 aa13.12□□□□□ -0.31
NME3-202ENST00000561637 DSCR10P59022 87 aa13.09□□□□□ -0.31
NME3-202ENST00000561637 C20orf166-AS1Q96NR2 134 aa13.08□□□□□ -0.32
NME3-202ENST00000561637 SSPOA2VEC9 5147 aa13.07□□□□□ -0.32
NME3-202ENST00000561637 A8MUU9 505 aa13.06□□□□□ -0.32
NME3-202ENST00000561637 PSMB2P49721 201 aa13.06□□□□□ -0.32
NME3-202ENST00000561637 TMA7Q9Y2S6 64 aaKnown RBP13.06□□□□□ -0.32
NME3-202ENST00000561637 SIGMAR1Q99720 223 aa13.04□□□□□ -0.32
NME3-202ENST00000561637 ORMDL1Q9P0S3 153 aa13.04□□□□□ -0.32
NME3-202ENST00000561637 DNAL4O96015 105 aa13.02□□□□□ -0.33
NME3-202ENST00000561637 GHRHP01286 108 aa13.02□□□□□ -0.33
NME3-202ENST00000561637 USH2AO75445 5202 aa13.01□□□□□ -0.33
NME3-202ENST00000561637 ANKRD29Q8N6D5 301 aa13.01□□□□□ -0.33
NME3-202ENST00000561637 DEFB116Q30KQ4 102 aa12.97□□□□□ -0.33
NME3-202ENST00000561637 UQCR10Q9UDW1 63 aa12.97□□□□□ -0.33
NME3-202ENST00000561637 NOTCH2NLQ7Z3S9 236 aa12.96□□□□□ -0.33
NME3-202ENST00000561637 TRBV7-4A0A0J9YYF1 115 aa12.95□□□□□ -0.34
NME3-202ENST00000561637 IGKV4-1P06312 121 aa12.95□□□□□ -0.34
NME3-202ENST00000561637 KRTAP16-1A8MUX0 517 aa12.94□□□□□ -0.34
NME3-202ENST00000561637 COX6CP09669 75 aa12.92□□□□□ -0.34
NME3-202ENST00000561637 TMEM256-PLSCR3K7ERE1 68 aa12.91□□□□□ -0.34
NME3-202ENST00000561637 CCKP06307 115 aa12.91□□□□□ -0.34
NME3-202ENST00000561637 LINC00472Q9H8W2 130 aa12.9□□□□□ -0.34
NME3-202ENST00000561637 LINC00313P59037 77 aa12.88□□□□□ -0.35
NME3-202ENST00000561637 H3BQ85 93 aa12.87□□□□□ -0.35
NME3-202ENST00000561637 TRACP01848 142 aa12.87□□□□□ -0.35
NME3-202ENST00000561637 UBE2V1Q13404 147 aa12.86□□□□□ -0.35
NME3-202ENST00000561637 FCGBPQ9Y6R7 5405 aaPredicted RBP12.86□□□□□ -0.35
NME3-202ENST00000561637 VPS25Q9BRG1 176 aa12.84□□□□□ -0.35
NME3-202ENST00000561637 KRTAP9-8Q9BYQ0 159 aa12.84□□□□□ -0.35
NME3-202ENST00000561637 SCGB1C2P0DMR2 95 aa12.83□□□□□ -0.36
NME3-202ENST00000561637 IGHV6-1A0A0B4J1U7 121 aa12.81□□□□□ -0.36
NME3-202ENST00000561637 NAA38Q9BRA0 125 aaKnown RBP12.77□□□□□ -0.37
NME3-202ENST00000561637 TRBV20-1A0A075B6N2 111 aa12.76□□□□□ -0.37
NME3-202ENST00000561637 RBM3P98179 157 aaKnown RBP12.75□□□□□ -0.37
NME3-202ENST00000561637 BAALC-AS2P0C853 105 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms