RNA–Protein interactions for RNA: ENST00000560897.1

HERC1-210, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 5

Gene HERC1, Length 539 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-210ENST00000560897 SPANXDQ9BXN6 97 aa5.22□□□□□ -1.57
HERC1-210ENST00000560897 SPANXCQ9NY87 97 aa5.22□□□□□ -1.57
HERC1-210ENST00000560897 IGKV2-28A0A075B6P5 120 aa5.21□□□□□ -1.58
HERC1-210ENST00000560897 IGKV2D-28P01615 120 aa5.21□□□□□ -1.58
HERC1-210ENST00000560897 VAMP3Q15836 100 aa5.21□□□□□ -1.58
HERC1-210ENST00000560897 TAL2Q16559 108 aa5.21□□□□□ -1.58
HERC1-210ENST00000560897 GTF2H5Q6ZYL4 71 aa5.21□□□□□ -1.58
HERC1-210ENST00000560897 SPANXB1Q9NS25 103 aaPredicted RBP5.21□□□□□ -1.58
HERC1-210ENST00000560897 KRTAP4-8A0A0G2JLE6 195 aa5.2□□□□□ -1.58
HERC1-210ENST00000560897 KRTAP23-1A1A580 65 aa5.2□□□□□ -1.58
HERC1-210ENST00000560897 NCR3O14931 201 aa5.2□□□□□ -1.58
HERC1-210ENST00000560897 SLC25A20O43772 301 aa5.2□□□□□ -1.58
HERC1-210ENST00000560897 NDUFC2O95298 119 aa5.2□□□□□ -1.58
HERC1-210ENST00000560897 ZNF706Q9Y5V0 76 aaPredicted RBP5.2□□□□□ -1.58
HERC1-210ENST00000560897 TRAV13-2A0A0B4J235 113 aa5.19□□□□□ -1.58
HERC1-210ENST00000560897 K7ERU9 68 aa5.19□□□□□ -1.58
HERC1-210ENST00000560897 RAB37Q96AX2 223 aa5.19□□□□□ -1.58
HERC1-210ENST00000560897 HIGD2AQ9BW72 106 aa5.19□□□□□ -1.58
HERC1-210ENST00000560897 LINC00846Q9NV44 126 aa5.19□□□□□ -1.58
HERC1-210ENST00000560897 LOC107984156A0A0G2JMH3 177 aa5.18□□□□□ -1.58
HERC1-210ENST00000560897 TRBV10-2A0A0K0K1G8 114 aa5.18□□□□□ -1.58
HERC1-210ENST00000560897 RPS29P62273 56 aaKnown RBP5.18□□□□□ -1.58
HERC1-210ENST00000560897 ARL17AQ8IVW1 177 aa5.18□□□□□ -1.58
HERC1-210ENST00000560897 Q8N377 158 aa5.18□□□□□ -1.58
HERC1-210ENST00000560897 TMEM126AQ9H061 195 aa5.18□□□□□ -1.58
HERC1-210ENST00000560897 IGLV5-37A0A075B6J1 123 aa5.17□□□□□ -1.58
HERC1-210ENST00000560897 K7EP34 96 aa5.17□□□□□ -1.58
HERC1-210ENST00000560897 OCIAD2Q56VL3 154 aa5.17□□□□□ -1.58
HERC1-210ENST00000560897 SPRR4Q96PI1 79 aa5.17□□□□□ -1.58
HERC1-210ENST00000560897 LITAFQ99732 161 aa5.17□□□□□ -1.58
HERC1-210ENST00000560897 ETDCA0A1B0GVM5 59 aa5.16□□□□□ -1.58
HERC1-210ENST00000560897 Q75L30 129 aa5.16□□□□□ -1.58
HERC1-210ENST00000560897 CEND1Q8N111 149 aa5.16□□□□□ -1.58
HERC1-210ENST00000560897 SNCGO76070 127 aa5.15□□□□□ -1.59
HERC1-210ENST00000560897 Q1RN00 199 aa5.15□□□□□ -1.59
HERC1-210ENST00000560897 SOSTDC1Q6X4U4 206 aa5.15□□□□□ -1.59
HERC1-210ENST00000560897 TRAV23DV6A0A075B6W5 121 aa5.14□□□□□ -1.59
HERC1-210ENST00000560897 TRBV10-3A0A0K0K1G6 114 aa5.14□□□□□ -1.59
HERC1-210ENST00000560897 A0A1B0GWB2 263 aa5.14□□□□□ -1.59
HERC1-210ENST00000560897 A0A1W2PPM0 123 aa5.14□□□□□ -1.59
HERC1-210ENST00000560897 C9orf92A6NGG3 77 aa5.13□□□□□ -1.59
HERC1-210ENST00000560897 H7C2G1 150 aa5.13□□□□□ -1.59
HERC1-210ENST00000560897 FABP2P12104 132 aa5.13□□□□□ -1.59
HERC1-210ENST00000560897 Q6Q795 121 aa5.12□□□□□ -1.59
HERC1-210ENST00000560897 KCNQ1DNQ9H478 68 aa5.12□□□□□ -1.59
HERC1-210ENST00000560897 H3BUT2 72 aa5.11□□□□□ -1.59
HERC1-210ENST00000560897 ZNF73O43830 326 aaPredicted RBP5.11□□□□□ -1.59
HERC1-210ENST00000560897 IGLV6-57P01721 117 aa5.11□□□□□ -1.59
HERC1-210ENST00000560897 PSMB2P49721 201 aa5.11□□□□□ -1.59
HERC1-210ENST00000560897 MOBPQ13875 183 aa5.11□□□□□ -1.59
HERC1-210ENST00000560897 KRTAP6-3Q3LI67 103 aa5.11□□□□□ -1.59
HERC1-210ENST00000560897 LCE4AQ5TA78 99 aa5.11□□□□□ -1.59
HERC1-210ENST00000560897 NHP2Q9NX24 153 aaKnown RBP5.11□□□□□ -1.59
HERC1-210ENST00000560897 PRO1854Q9UHT4 67 aa5.11□□□□□ -1.59
HERC1-210ENST00000560897 SPCS1Q9Y6A9 102 aa5.11□□□□□ -1.59
HERC1-210ENST00000560897 IGLV9-49A0A0B4J1Y8 123 aa5.1□□□□□ -1.59
HERC1-210ENST00000560897 F8W1H4 67 aa5.1□□□□□ -1.59
HERC1-210ENST00000560897 COX6CP09669 75 aa5.1□□□□□ -1.59
HERC1-210ENST00000560897 Q8NDZ9 215 aa5.1□□□□□ -1.59
HERC1-210ENST00000560897 A0A0B4J2C4 111 aa5.09□□□□□ -1.59
HERC1-210ENST00000560897 SCGB1C2P0DMR2 95 aa5.09□□□□□ -1.59
HERC1-210ENST00000560897 SCGB1A1P11684 91 aa5.09□□□□□ -1.59
HERC1-210ENST00000560897 COX7BP24311 80 aa5.09□□□□□ -1.59
HERC1-210ENST00000560897 FXYD2P54710 66 aa5.09□□□□□ -1.59
HERC1-210ENST00000560897 C6orf99Q4VX62 202 aa5.09□□□□□ -1.59
HERC1-210ENST00000560897 VPS25Q9BRG1 176 aa5.09□□□□□ -1.59
HERC1-210ENST00000560897 J3QR89 54 aa5.08□□□□□ -1.6
HERC1-210ENST00000560897 LYRM7Q5U5X0 104 aa5.08□□□□□ -1.6
HERC1-210ENST00000560897 SSBP3-AS1Q7Z2R9 100 aa5.08□□□□□ -1.6
HERC1-210ENST00000560897 LCE1DQ5T752 114 aa5.07□□□□□ -1.6
HERC1-210ENST00000560897 SMIM11BQ8TCY0 68 aa5.07□□□□□ -1.6
HERC1-210ENST00000560897 KRTAP9-8Q9BYQ0 159 aa5.07□□□□□ -1.6
HERC1-210ENST00000560897 DHRS4-AS1Q9P1J3 65 aa5.07□□□□□ -1.6
HERC1-210ENST00000560897 TRBV7-6A0A0J9YX20 115 aa5.06□□□□□ -1.6
HERC1-210ENST00000560897 H0YGX0 51 aa5.06□□□□□ -1.6
HERC1-210ENST00000560897 SMCR5Q8TEV8 140 aa5.05□□□□□ -1.6
HERC1-210ENST00000560897 K7ERJ3 54 aa5.04□□□□□ -1.6
HERC1-210ENST00000560897 SPRR1AP35321 89 aa5.04□□□□□ -1.6
HERC1-210ENST00000560897 KRTAP20-1Q3LI63 56 aa5.04□□□□□ -1.6
HERC1-210ENST00000560897 LINC00483Q53H64 154 aa5.04□□□□□ -1.6
HERC1-210ENST00000560897 Q6ZRX8 168 aa5.04□□□□□ -1.6
HERC1-210ENST00000560897 LIMD2Q9BT23 127 aa5.04□□□□□ -1.6
HERC1-210ENST00000560897 PRO0461Q9UI25 63 aa5.04□□□□□ -1.6
HERC1-210ENST00000560897 TRBV20-1A0A075B6N2 111 aa5.03□□□□□ -1.6
HERC1-210ENST00000560897 hADV29S1A0JD25 119 aa5.03□□□□□ -1.6
HERC1-210ENST00000560897 DNAL4O96015 105 aa5.03□□□□□ -1.6
HERC1-210ENST00000560897 C9orf153Q5TBE3 101 aa5.03□□□□□ -1.6
HERC1-210ENST00000560897 DEFB105AQ8NG35 78 aa5.03□□□□□ -1.6
HERC1-210ENST00000560897 H3BMG7 143 aa5.02□□□□□ -1.61
HERC1-210ENST00000560897 ELOF1P60002 83 aaKnown RBP5.02□□□□□ -1.61
HERC1-210ENST00000560897 RPL37P61927 97 aaKnown RBP5.02□□□□□ -1.61
HERC1-210ENST00000560897 NEBP20929 6669 aa5□□□□□ -1.61
HERC1-210ENST00000560897 LINC00575Q6W349 94 aa5□□□□□ -1.61
HERC1-210ENST00000560897 NAA38Q9BRA0 125 aaKnown RBP5□□□□□ -1.61
HERC1-210ENST00000560897 KRTAP4-7Q9BYR0 210 aa5□□□□□ -1.61
HERC1-210ENST00000560897 KRTAP19-4Q3LI73 84 aa4.99□□□□□ -1.61
HERC1-210ENST00000560897 SIGMAR1Q99720 223 aa4.99□□□□□ -1.61
HERC1-210ENST00000560897 LAMTOR3Q9UHA4 124 aa4.99□□□□□ -1.61
HERC1-210ENST00000560897 TEX49A0A1B0GTD5 131 aa4.98□□□□□ -1.61
HERC1-210ENST00000560897 A0A1B0GX51 115 aa4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms