RNA–Protein interactions for RNA: ENST00000560213.1

LRRC28-217, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4

Gene LRRC28, Length 552 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-217ENST00000560213 COX6CP09669 75 aa9.47□□□□□ -0.89
LRRC28-217ENST00000560213 SMIM29Q86T20 159 aa9.46□□□□□ -0.9
LRRC28-217ENST00000560213 FAM218AQ96MZ4 157 aa9.46□□□□□ -0.9
LRRC28-217ENST00000560213 HERC1Q15751 4861 aa9.45□□□□□ -0.9
LRRC28-217ENST00000560213 A0A1B0GX51 115 aa9.44□□□□□ -0.9
LRRC28-217ENST00000560213 SPINK1P00995 79 aa9.42□□□□□ -0.9
LRRC28-217ENST00000560213 SCGB1C2P0DMR2 95 aa9.42□□□□□ -0.9
LRRC28-217ENST00000560213 OCIAD2Q56VL3 154 aa9.42□□□□□ -0.9
LRRC28-217ENST00000560213 CLEC2BQ92478 149 aa9.42□□□□□ -0.9
LRRC28-217ENST00000560213 F8WEM9 126 aa9.41□□□□□ -0.9
LRRC28-217ENST00000560213 BATFQ16520 125 aa9.41□□□□□ -0.9
LRRC28-217ENST00000560213 PPDPFLQ8WWR9 84 aa9.41□□□□□ -0.9
LRRC28-217ENST00000560213 SNHG12Q9BXW3 62 aa9.4□□□□□ -0.9
LRRC28-217ENST00000560213 GHRHP01286 108 aa9.39□□□□□ -0.91
LRRC28-217ENST00000560213 DNAL4O96015 105 aa9.38□□□□□ -0.91
LRRC28-217ENST00000560213 PRR4Q16378 134 aa9.38□□□□□ -0.91
LRRC28-217ENST00000560213 HRCT1Q6UXD1 115 aa9.36□□□□□ -0.91
LRRC28-217ENST00000560213 RPS29P62273 56 aaKnown RBP9.35□□□□□ -0.91
LRRC28-217ENST00000560213 RETNLBQ9BQ08 111 aa9.35□□□□□ -0.91
LRRC28-217ENST00000560213 FABP2P12104 132 aa9.34□□□□□ -0.91
LRRC28-217ENST00000560213 NAA38Q9BRA0 125 aaKnown RBP9.34□□□□□ -0.91
LRRC28-217ENST00000560213 CD164Q04900 197 aa9.33□□□□□ -0.92
LRRC28-217ENST00000560213 ORMDL1Q9P0S3 153 aa9.33□□□□□ -0.92
LRRC28-217ENST00000560213 IGLV8-61A0A075B6I0 122 aa9.32□□□□□ -0.92
LRRC28-217ENST00000560213 A0A0G2JQZ4 141 aa9.32□□□□□ -0.92
LRRC28-217ENST00000560213 NDUFV3P56181 108 aaKnown RBP9.32□□□□□ -0.92
LRRC28-217ENST00000560213 Q6JHZ5 121 aa9.32□□□□□ -0.92
LRRC28-217ENST00000560213 H3BQ85 93 aa9.31□□□□□ -0.92
LRRC28-217ENST00000560213 LST1O00453 97 aa9.31□□□□□ -0.92
LRRC28-217ENST00000560213 TRACP01848 142 aa9.31□□□□□ -0.92
LRRC28-217ENST00000560213 LCE2BO14633 110 aa9.29□□□□□ -0.92
LRRC28-217ENST00000560213 LIMD2Q9BT23 127 aa9.29□□□□□ -0.92
LRRC28-217ENST00000560213 H3BUT2 72 aa9.28□□□□□ -0.92
LRRC28-217ENST00000560213 TMEM256-PLSCR3K7ERE1 68 aa9.28□□□□□ -0.92
LRRC28-217ENST00000560213 IGFL1Q6UW32 110 aa9.28□□□□□ -0.92
LRRC28-217ENST00000560213 LYRM7Q5U5X0 104 aa9.27□□□□□ -0.93
LRRC28-217ENST00000560213 IGLV7-46A0A075B6I9 117 aa9.26□□□□□ -0.93
LRRC28-217ENST00000560213 H3BMG7 143 aa9.26□□□□□ -0.93
LRRC28-217ENST00000560213 TCL1BO95988 128 aa9.26□□□□□ -0.93
LRRC28-217ENST00000560213 ATXN8Q156A1 80 aa9.26□□□□□ -0.93
LRRC28-217ENST00000560213 C9orf118A6NHY6 69 aa9.25□□□□□ -0.93
LRRC28-217ENST00000560213 FP248Q71RG6 208 aaPredicted RBP9.25□□□□□ -0.93
LRRC28-217ENST00000560213 TAX1BP3O14907 124 aa9.24□□□□□ -0.93
LRRC28-217ENST00000560213 PCP4L1A6NKN8 68 aa9.22□□□□□ -0.93
LRRC28-217ENST00000560213 BAALC-AS2P0C853 105 aa9.22□□□□□ -0.93
LRRC28-217ENST00000560213 UBE2V1Q13404 147 aa9.22□□□□□ -0.93
LRRC28-217ENST00000560213 TRBV20-1A0A075B6N2 111 aa9.21□□□□□ -0.94
LRRC28-217ENST00000560213 Q5XG85 94 aa9.21□□□□□ -0.94
LRRC28-217ENST00000560213 HMCN2Q8NDA2 5059 aa9.21□□□□□ -0.94
LRRC28-217ENST00000560213 TRBV7-7A0A0K0K1E9 115 aa9.2□□□□□ -0.94
LRRC28-217ENST00000560213 A0A1B0GV72 72 aa9.19□□□□□ -0.94
LRRC28-217ENST00000560213 A0A1W2PPM0 123 aa9.18□□□□□ -0.94
LRRC28-217ENST00000560213 COL5A1-AS1Q5SY13 56 aa9.18□□□□□ -0.94
LRRC28-217ENST00000560213 ANKRD29Q8N6D5 301 aa9.18□□□□□ -0.94
LRRC28-217ENST00000560213 TEN1Q86WV5 123 aa9.17□□□□□ -0.94
LRRC28-217ENST00000560213 TPRXLQ17RH7 258 aa9.16□□□□□ -0.94
LRRC28-217ENST00000560213 Q6Q795 121 aa9.16□□□□□ -0.94
LRRC28-217ENST00000560213 C9JAW5 83 aa9.14□□□□□ -0.95
LRRC28-217ENST00000560213 RBM3P98179 157 aaKnown RBP9.14□□□□□ -0.95
LRRC28-217ENST00000560213 C1orf195Q5TG92 126 aa9.13□□□□□ -0.95
LRRC28-217ENST00000560213 CDIP1Q9H305 208 aa9.13□□□□□ -0.95
LRRC28-217ENST00000560213 A0A1W2PNM2 257 aa9.11□□□□□ -0.95
LRRC28-217ENST00000560213 ASB16-AS1Q495Z4 193 aa9.11□□□□□ -0.95
LRRC28-217ENST00000560213 DSCR8Q96T75 97 aa9.11□□□□□ -0.95
LRRC28-217ENST00000560213 KRTAP13-3Q3SY46 172 aa9.1□□□□□ -0.95
LRRC28-217ENST00000560213 SS18L2Q9UHA2 77 aa9.1□□□□□ -0.95
LRRC28-217ENST00000560213 SPCS1Q9Y6A9 102 aa9.1□□□□□ -0.95
LRRC28-217ENST00000560213 A0A087WSZ3 146 aa9.09□□□□□ -0.95
LRRC28-217ENST00000560213 CCKP06307 115 aa9.09□□□□□ -0.95
LRRC28-217ENST00000560213 TRBV7-4A0A0J9YYF1 115 aa9.08□□□□□ -0.96
LRRC28-217ENST00000560213 JMJD7-PLA2G4BH0Y9G9 81 aa9.08□□□□□ -0.96
LRRC28-217ENST00000560213 H3BT86 120 aa9.05□□□□□ -0.96
LRRC28-217ENST00000560213 VPS25Q9BRG1 176 aa9.05□□□□□ -0.96
LRRC28-217ENST00000560213 LRP2P98164 4655 aa9.04□□□□□ -0.96
LRRC28-217ENST00000560213 MTURNQ8N3F0 131 aa9.04□□□□□ -0.96
LRRC28-217ENST00000560213 LPAP08519 4548 aa9.04□□□□□ -0.96
LRRC28-217ENST00000560213 C9orf92A6NGG3 77 aa9□□□□□ -0.97
LRRC28-217ENST00000560213 K7EP34 96 aa9□□□□□ -0.97
LRRC28-217ENST00000560213 PDE6GP18545 87 aa9□□□□□ -0.97
LRRC28-217ENST00000560213 OBSCN-AS1Q96MR7 158 aa9□□□□□ -0.97
LRRC28-217ENST00000560213 C14orf132Q9NPU4 83 aa9□□□□□ -0.97
LRRC28-217ENST00000560213 LOC110117498A0A087WWA1 95 aa8.99□□□□□ -0.97
LRRC28-217ENST00000560213 Q6ZQT0 140 aa8.98□□□□□ -0.97
LRRC28-217ENST00000560213 C21orf62-AS1Q17RA5 79 aa8.97□□□□□ -0.97
LRRC28-217ENST00000560213 GTF2H5Q6ZYL4 71 aa8.97□□□□□ -0.97
LRRC28-217ENST00000560213 XP32Q5T750 250 aa8.96□□□□□ -0.98
LRRC28-217ENST00000560213 Q96NJ1 140 aa8.96□□□□□ -0.98
LRRC28-217ENST00000560213 A0A1B0GW54 56 aa8.93□□□□□ -0.98
LRRC28-217ENST00000560213 IGKV4-1P06312 121 aa8.92□□□□□ -0.98
LRRC28-217ENST00000560213 SIGMAR1Q99720 223 aa8.91□□□□□ -0.98
LRRC28-217ENST00000560213 LINC00472Q9H8W2 130 aa8.91□□□□□ -0.98
LRRC28-217ENST00000560213 PRO0461Q9UI25 63 aa8.91□□□□□ -0.98
LRRC28-217ENST00000560213 SEC61BP60468 96 aaKnown RBP8.9□□□□□ -0.98
LRRC28-217ENST00000560213 DEFB116Q30KQ4 102 aa8.9□□□□□ -0.98
LRRC28-217ENST00000560213 UBR4Q5T4S7 5183 aa8.9□□□□□ -0.99
LRRC28-217ENST00000560213 F8W1H4 67 aa8.85□□□□□ -0.99
LRRC28-217ENST00000560213 J3KT08 172 aa8.83□□□□□ -1
LRRC28-217ENST00000560213 LCE2CQ5TA81 110 aa8.83□□□□□ -1
LRRC28-217ENST00000560213 NREPQ16612 68 aa8.82□□□□□ -1
LRRC28-217ENST00000560213 DSCR10P59022 87 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms