RNA–Protein interactions for RNA: ENST00000560175.5

SMAD3-213, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 542 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-213ENST00000560175 HRCT1Q6UXD1 115 aa7.3□□□□□ -1.24
SMAD3-213ENST00000560175 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.3□□□□□ -1.24
SMAD3-213ENST00000560175 XP32Q5T750 250 aa7.29□□□□□ -1.24
SMAD3-213ENST00000560175 CEND1Q8N111 149 aa7.29□□□□□ -1.24
SMAD3-213ENST00000560175 PPDPFLQ8WWR9 84 aa7.29□□□□□ -1.24
SMAD3-213ENST00000560175 A0A0G2JQZ4 141 aa7.28□□□□□ -1.24
SMAD3-213ENST00000560175 A0A0U1RQV1 116 aa7.27□□□□□ -1.25
SMAD3-213ENST00000560175 H0YGX0 51 aa7.26□□□□□ -1.25
SMAD3-213ENST00000560175 C1orf195Q5TG92 126 aa7.26□□□□□ -1.25
SMAD3-213ENST00000560175 RAB37Q96AX2 223 aa7.26□□□□□ -1.25
SMAD3-213ENST00000560175 FAT4Q6V0I7 4981 aa7.25□□□□□ -1.25
SMAD3-213ENST00000560175 OCIAD2Q56VL3 154 aa7.25□□□□□ -1.25
SMAD3-213ENST00000560175 Q6JHZ5 121 aa7.25□□□□□ -1.25
SMAD3-213ENST00000560175 FXYD2P54710 66 aa7.24□□□□□ -1.25
SMAD3-213ENST00000560175 SEC61BP60468 96 aaKnown RBP7.24□□□□□ -1.25
SMAD3-213ENST00000560175 PRO1854Q9UHT4 67 aa7.24□□□□□ -1.25
SMAD3-213ENST00000560175 TMEM238LA0A1B0GVL6 79 aa7.23□□□□□ -1.25
SMAD3-213ENST00000560175 A6NJY4 79 aa7.23□□□□□ -1.25
SMAD3-213ENST00000560175 F8WEM9 126 aa7.23□□□□□ -1.25
SMAD3-213ENST00000560175 LCE2AQ5TA79 106 aaPredicted RBP7.23□□□□□ -1.25
SMAD3-213ENST00000560175 FAM218AQ96MZ4 157 aa7.23□□□□□ -1.25
SMAD3-213ENST00000560175 A0A1B0GX51 115 aa7.22□□□□□ -1.25
SMAD3-213ENST00000560175 IGFL1Q6UW32 110 aa7.22□□□□□ -1.25
SMAD3-213ENST00000560175 CLEC2BQ92478 149 aa7.22□□□□□ -1.25
SMAD3-213ENST00000560175 KRTAP4-1Q9BYQ7 146 aa7.22□□□□□ -1.25
SMAD3-213ENST00000560175 TCL1BO95988 128 aa7.2□□□□□ -1.26
SMAD3-213ENST00000560175 HSD52Q0P140 79 aa7.2□□□□□ -1.26
SMAD3-213ENST00000560175 TRBV7-7A0A0K0K1E9 115 aa7.19□□□□□ -1.26
SMAD3-213ENST00000560175 SNCGO76070 127 aa7.19□□□□□ -1.26
SMAD3-213ENST00000560175 SNHG12Q9BXW3 62 aa7.19□□□□□ -1.26
SMAD3-213ENST00000560175 TMA7Q9Y2S6 64 aaKnown RBP7.18□□□□□ -1.26
SMAD3-213ENST00000560175 Q6Q795 121 aa7.17□□□□□ -1.26
SMAD3-213ENST00000560175 UQCR10Q9UDW1 63 aa7.17□□□□□ -1.26
SMAD3-213ENST00000560175 TRIAP1O43715 76 aa7.16□□□□□ -1.26
SMAD3-213ENST00000560175 C9orf92A6NGG3 77 aa7.15□□□□□ -1.26
SMAD3-213ENST00000560175 GHRHP01286 108 aa7.15□□□□□ -1.26
SMAD3-213ENST00000560175 NDUFV3P56181 108 aaKnown RBP7.15□□□□□ -1.26
SMAD3-213ENST00000560175 H3BUT2 72 aa7.14□□□□□ -1.27
SMAD3-213ENST00000560175 TEN1Q86WV5 123 aa7.12□□□□□ -1.27
SMAD3-213ENST00000560175 H3BQ85 93 aa7.1□□□□□ -1.27
SMAD3-213ENST00000560175 K7ERJ3 54 aa7.1□□□□□ -1.27
SMAD3-213ENST00000560175 PCOTHQ58A44 107 aa7.1□□□□□ -1.27
SMAD3-213ENST00000560175 H3BMG7 143 aa7.09□□□□□ -1.27
SMAD3-213ENST00000560175 COX6CP09669 75 aa7.08□□□□□ -1.28
SMAD3-213ENST00000560175 RPL37P61927 97 aaKnown RBP7.08□□□□□ -1.28
SMAD3-213ENST00000560175 LST1O00453 97 aa7.07□□□□□ -1.28
SMAD3-213ENST00000560175 FABP2P12104 132 aa7.07□□□□□ -1.28
SMAD3-213ENST00000560175 KRTAP19-2Q3LHN2 52 aa7.07□□□□□ -1.28
SMAD3-213ENST00000560175 TMEM256-PLSCR3K7ERE1 68 aa7.06□□□□□ -1.28
SMAD3-213ENST00000560175 PSMB2P49721 201 aa7.06□□□□□ -1.28
SMAD3-213ENST00000560175 LCE2CQ5TA81 110 aa7.06□□□□□ -1.28
SMAD3-213ENST00000560175 ORMDL1Q9P0S3 153 aa7.06□□□□□ -1.28
SMAD3-213ENST00000560175 SS18L2Q9UHA2 77 aa7.06□□□□□ -1.28
SMAD3-213ENST00000560175 A0A1W2PNM2 257 aa7.05□□□□□ -1.28
SMAD3-213ENST00000560175 DNAL4O96015 105 aa7.04□□□□□ -1.28
SMAD3-213ENST00000560175 TRACP01848 142 aa7.04□□□□□ -1.28
SMAD3-213ENST00000560175 Q96NJ1 140 aa7.04□□□□□ -1.28
SMAD3-213ENST00000560175 UBE2V1Q13404 147 aa7.03□□□□□ -1.28
SMAD3-213ENST00000560175 A0A087WSZ3 146 aa7.02□□□□□ -1.29
SMAD3-213ENST00000560175 TRBV7-4A0A0J9YYF1 115 aa7.02□□□□□ -1.29
SMAD3-213ENST00000560175 SMIM6P0DI80 62 aa7.01□□□□□ -1.29
SMAD3-213ENST00000560175 Q75L30 129 aa7□□□□□ -1.29
SMAD3-213ENST00000560175 ANKRD29Q8N6D5 301 aa7□□□□□ -1.29
SMAD3-213ENST00000560175 OBSCN-AS1Q96MR7 158 aa6.99□□□□□ -1.29
SMAD3-213ENST00000560175 SCGB1C2P0DMR2 95 aa6.98□□□□□ -1.29
SMAD3-213ENST00000560175 M0R143 59 aa6.97□□□□□ -1.29
SMAD3-213ENST00000560175 C20orf166-AS1Q96NR2 134 aa6.96□□□□□ -1.3
SMAD3-213ENST00000560175 LINC00472Q9H8W2 130 aa6.95□□□□□ -1.3
SMAD3-213ENST00000560175 A8MUU9 505 aa6.94□□□□□ -1.3
SMAD3-213ENST00000560175 CCKP06307 115 aa6.94□□□□□ -1.3
SMAD3-213ENST00000560175 BAALC-AS2P0C853 105 aa6.93□□□□□ -1.3
SMAD3-213ENST00000560175 RBM3P98179 157 aaKnown RBP6.93□□□□□ -1.3
SMAD3-213ENST00000560175 KRTAP9-2Q9BYQ4 174 aa6.93□□□□□ -1.3
SMAD3-213ENST00000560175 LOC105371267A0A1B0GV96 52 aa6.92□□□□□ -1.3
SMAD3-213ENST00000560175 MT1HP80294 61 aa6.92□□□□□ -1.3
SMAD3-213ENST00000560175 ATP11AUNQ6ZP68 121 aa6.91□□□□□ -1.3
SMAD3-213ENST00000560175 A0A1B0GV72 72 aa6.9□□□□□ -1.3
SMAD3-213ENST00000560175 FLGP20930 4061 aaPredicted RBP6.9□□□□□ -1.31
SMAD3-213ENST00000560175 IGKV4-1P06312 121 aa6.89□□□□□ -1.31
SMAD3-213ENST00000560175 ATXN8Q156A1 80 aa6.89□□□□□ -1.31
SMAD3-213ENST00000560175 DSCR8Q96T75 97 aa6.89□□□□□ -1.31
SMAD3-213ENST00000560175 KRTAP16-1A8MUX0 517 aa6.88□□□□□ -1.31
SMAD3-213ENST00000560175 TSTD3H0UI37 97 aa6.88□□□□□ -1.31
SMAD3-213ENST00000560175 DSCR10P59022 87 aa6.87□□□□□ -1.31
SMAD3-213ENST00000560175 LINC00313P59037 77 aa6.87□□□□□ -1.31
SMAD3-213ENST00000560175 C21orf62-AS1Q17RA5 79 aa6.87□□□□□ -1.31
SMAD3-213ENST00000560175 NAA38Q9BRA0 125 aaKnown RBP6.87□□□□□ -1.31
SMAD3-213ENST00000560175 C9JAW5 83 aa6.86□□□□□ -1.31
SMAD3-213ENST00000560175 SIGMAR1Q99720 223 aa6.86□□□□□ -1.31
SMAD3-213ENST00000560175 A0A1B0GW54 56 aa6.85□□□□□ -1.31
SMAD3-213ENST00000560175 JMJD7-PLA2G4BH0Y9G9 81 aa6.85□□□□□ -1.31
SMAD3-213ENST00000560175 NOTCH2NLQ7Z3S9 236 aa6.85□□□□□ -1.31
SMAD3-213ENST00000560175 TRBV20-1A0A075B6N2 111 aa6.84□□□□□ -1.31
SMAD3-213ENST00000560175 DEFB116Q30KQ4 102 aa6.84□□□□□ -1.31
SMAD3-213ENST00000560175 Q6ZQT0 140 aa6.84□□□□□ -1.31
SMAD3-213ENST00000560175 LOC110117498A0A087WWA1 95 aa6.83□□□□□ -1.32
SMAD3-213ENST00000560175 LCE2DQ5TA82 110 aaPredicted RBP6.82□□□□□ -1.32
SMAD3-213ENST00000560175 LYRM7Q5U5X0 104 aa6.82□□□□□ -1.32
SMAD3-213ENST00000560175 PDE6GP18545 87 aa6.81□□□□□ -1.32
SMAD3-213ENST00000560175 VPS25Q9BRG1 176 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms