RNA–Protein interactions for RNA: ENST00000560127.1

RABGGTA-213, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 4

Gene RABGGTA, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-213ENST00000560127 SPRR1BP22528 89 aa6.79□□□□□ -1.32
RABGGTA-213ENST00000560127 HIGD1BQ9P298 99 aa6.79□□□□□ -1.32
RABGGTA-213ENST00000560127 CBY1Q9Y3M2 126 aa6.79□□□□□ -1.32
RABGGTA-213ENST00000560127 TRAV13-2A0A0B4J235 113 aa6.78□□□□□ -1.32
RABGGTA-213ENST00000560127 HIST1H4GQ99525 98 aa6.78□□□□□ -1.32
RABGGTA-213ENST00000560127 SLC25A34Q6PIV7 304 aa6.77□□□□□ -1.33
RABGGTA-213ENST00000560127 DHRS4-AS1Q9P1J3 65 aa6.77□□□□□ -1.33
RABGGTA-213ENST00000560127 A0A1B0GWB2 263 aa6.76□□□□□ -1.33
RABGGTA-213ENST00000560127 KRTAP9-8Q9BYQ0 159 aa6.76□□□□□ -1.33
RABGGTA-213ENST00000560127 CFC1P0CG37 223 aa6.75□□□□□ -1.33
RABGGTA-213ENST00000560127 HINT1P49773 126 aaPredicted RBP6.75□□□□□ -1.33
RABGGTA-213ENST00000560127 RPL37P61927 97 aaKnown RBP6.75□□□□□ -1.33
RABGGTA-213ENST00000560127 SMIM29Q86T20 159 aa6.75□□□□□ -1.33
RABGGTA-213ENST00000560127 LIMD2Q9BT23 127 aa6.75□□□□□ -1.33
RABGGTA-213ENST00000560127 IGLV5-48A0A075B6I7 105 aa6.74□□□□□ -1.33
RABGGTA-213ENST00000560127 HRCT1Q6UXD1 115 aa6.74□□□□□ -1.33
RABGGTA-213ENST00000560127 KRTAP19-1Q8IUB9 90 aa6.74□□□□□ -1.33
RABGGTA-213ENST00000560127 FXYD2P54710 66 aa6.73□□□□□ -1.33
RABGGTA-213ENST00000560127 LINC00575Q6W349 94 aa6.71□□□□□ -1.34
RABGGTA-213ENST00000560127 A0A0B4J2C4 111 aa6.7□□□□□ -1.34
RABGGTA-213ENST00000560127 CEND1Q8N111 149 aa6.7□□□□□ -1.34
RABGGTA-213ENST00000560127 TAL2Q16559 108 aa6.69□□□□□ -1.34
RABGGTA-213ENST00000560127 Q1RN00 199 aa6.69□□□□□ -1.34
RABGGTA-213ENST00000560127 DEFB105AQ8NG35 78 aa6.69□□□□□ -1.34
RABGGTA-213ENST00000560127 A0A0G2JQZ4 141 aa6.68□□□□□ -1.34
RABGGTA-213ENST00000560127 TEX49A0A1B0GTD5 131 aa6.68□□□□□ -1.34
RABGGTA-213ENST00000560127 H7C2G1 150 aa6.68□□□□□ -1.34
RABGGTA-213ENST00000560127 Q6Q795 121 aa6.68□□□□□ -1.34
RABGGTA-213ENST00000560127 FAM218AQ96MZ4 157 aa6.67□□□□□ -1.34
RABGGTA-213ENST00000560127 K7ERJ3 54 aa6.66□□□□□ -1.34
RABGGTA-213ENST00000560127 HSD52Q0P140 79 aa6.66□□□□□ -1.34
RABGGTA-213ENST00000560127 Q6ZQY7 126 aa6.66□□□□□ -1.34
RABGGTA-213ENST00000560127 LCE2BO14633 110 aa6.65□□□□□ -1.34
RABGGTA-213ENST00000560127 LAMTOR3Q9UHA4 124 aa6.65□□□□□ -1.34
RABGGTA-213ENST00000560127 hADV29S1A0JD25 119 aa6.64□□□□□ -1.35
RABGGTA-213ENST00000560127 RAB37Q96AX2 223 aa6.64□□□□□ -1.35
RABGGTA-213ENST00000560127 NHP2Q9NX24 153 aaKnown RBP6.64□□□□□ -1.35
RABGGTA-213ENST00000560127 UQCR10Q9UDW1 63 aa6.64□□□□□ -1.35
RABGGTA-213ENST00000560127 C1orf195Q5TG92 126 aa6.63□□□□□ -1.35
RABGGTA-213ENST00000560127 VAMP3Q15836 100 aa6.62□□□□□ -1.35
RABGGTA-213ENST00000560127 BVES-AS1Q5T3Y7 98 aa6.62□□□□□ -1.35
RABGGTA-213ENST00000560127 PRO1933Q9H354 126 aa6.62□□□□□ -1.35
RABGGTA-213ENST00000560127 PRO1854Q9UHT4 67 aa6.62□□□□□ -1.35
RABGGTA-213ENST00000560127 LOC105371267A0A1B0GV96 52 aa6.61□□□□□ -1.35
RABGGTA-213ENST00000560127 TRIAP1O43715 76 aa6.61□□□□□ -1.35
RABGGTA-213ENST00000560127 CD164Q04900 197 aa6.61□□□□□ -1.35
RABGGTA-213ENST00000560127 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.61□□□□□ -1.35
RABGGTA-213ENST00000560127 TMEM238LA0A1B0GVL6 79 aa6.6□□□□□ -1.35
RABGGTA-213ENST00000560127 A6NJY4 79 aa6.6□□□□□ -1.35
RABGGTA-213ENST00000560127 MT2AP02795 61 aa6.6□□□□□ -1.35
RABGGTA-213ENST00000560127 Q5XG85 94 aa6.6□□□□□ -1.35
RABGGTA-213ENST00000560127 SMIM6P0DI80 62 aa6.59□□□□□ -1.35
RABGGTA-213ENST00000560127 CLEC2BQ92478 149 aa6.57□□□□□ -1.36
RABGGTA-213ENST00000560127 H0YGX0 51 aa6.56□□□□□ -1.36
RABGGTA-213ENST00000560127 IGFL1Q6UW32 110 aa6.56□□□□□ -1.36
RABGGTA-213ENST00000560127 KRTAP9-3Q9BYQ3 159 aa6.56□□□□□ -1.36
RABGGTA-213ENST00000560127 MT1FP04733 61 aa6.55□□□□□ -1.36
RABGGTA-213ENST00000560127 H3BUT2 72 aa6.54□□□□□ -1.36
RABGGTA-213ENST00000560127 OCIAD2Q56VL3 154 aa6.54□□□□□ -1.36
RABGGTA-213ENST00000560127 PPDPFLQ8WWR9 84 aa6.54□□□□□ -1.36
RABGGTA-213ENST00000560127 NEBP20929 6669 aa6.53□□□□□ -1.36
RABGGTA-213ENST00000560127 A0A1B0GX51 115 aa6.52□□□□□ -1.37
RABGGTA-213ENST00000560127 F8WEM9 126 aa6.51□□□□□ -1.37
RABGGTA-213ENST00000560127 ATP11AUNQ6ZP68 121 aa6.51□□□□□ -1.37
RABGGTA-213ENST00000560127 Q6JHZ5 121 aa6.5□□□□□ -1.37
RABGGTA-213ENST00000560127 TRBV7-7A0A0K0K1E9 115 aa6.49□□□□□ -1.37
RABGGTA-213ENST00000560127 NDUFV3P56181 108 aaKnown RBP6.49□□□□□ -1.37
RABGGTA-213ENST00000560127 KRTAP6-3Q3LI67 103 aa6.49□□□□□ -1.37
RABGGTA-213ENST00000560127 Q75L30 129 aa6.49□□□□□ -1.37
RABGGTA-213ENST00000560127 PSMB2P49721 201 aa6.48□□□□□ -1.37
RABGGTA-213ENST00000560127 KRTAP19-6Q3LI70 58 aa6.48□□□□□ -1.37
RABGGTA-213ENST00000560127 SNHG12Q9BXW3 62 aa6.48□□□□□ -1.37
RABGGTA-213ENST00000560127 KRTAP10-10P60014 251 aa6.47□□□□□ -1.37
RABGGTA-213ENST00000560127 NAA38Q9BRA0 125 aaKnown RBP6.47□□□□□ -1.37
RABGGTA-213ENST00000560127 LINC00846Q9NV44 126 aa6.47□□□□□ -1.37
RABGGTA-213ENST00000560127 LST1O00453 97 aa6.46□□□□□ -1.38
RABGGTA-213ENST00000560127 OBSCN-AS1Q96MR7 158 aa6.45□□□□□ -1.38
RABGGTA-213ENST00000560127 A0A1W2PNM2 257 aa6.44□□□□□ -1.38
RABGGTA-213ENST00000560127 M0R143 59 aa6.44□□□□□ -1.38
RABGGTA-213ENST00000560127 TCL1BO95988 128 aa6.44□□□□□ -1.38
RABGGTA-213ENST00000560127 FABP2P12104 132 aa6.44□□□□□ -1.38
RABGGTA-213ENST00000560127 H3BMG7 143 aa6.43□□□□□ -1.38
RABGGTA-213ENST00000560127 TRACP01848 142 aa6.43□□□□□ -1.38
RABGGTA-213ENST00000560127 ORMDL1Q9P0S3 153 aa6.43□□□□□ -1.38
RABGGTA-213ENST00000560127 A0A1B0GV72 72 aa6.42□□□□□ -1.38
RABGGTA-213ENST00000560127 TSTD3H0UI37 97 aa6.42□□□□□ -1.38
RABGGTA-213ENST00000560127 SNCGO76070 127 aa6.41□□□□□ -1.38
RABGGTA-213ENST00000560127 DNAL4O96015 105 aa6.41□□□□□ -1.38
RABGGTA-213ENST00000560127 COX6CP09669 75 aa6.41□□□□□ -1.38
RABGGTA-213ENST00000560127 Q96NJ1 140 aa6.41□□□□□ -1.38
RABGGTA-213ENST00000560127 TRBV20-1A0A075B6N2 111 aa6.4□□□□□ -1.38
RABGGTA-213ENST00000560127 TEN1Q86WV5 123 aa6.39□□□□□ -1.39
RABGGTA-213ENST00000560127 A0A087WSZ3 146 aa6.38□□□□□ -1.39
RABGGTA-213ENST00000560127 SCGB1C2P0DMR2 95 aa6.38□□□□□ -1.39
RABGGTA-213ENST00000560127 MUC12Q9UKN1 5478 aa6.38□□□□□ -1.39
RABGGTA-213ENST00000560127 TMEM256-PLSCR3K7ERE1 68 aa6.37□□□□□ -1.39
RABGGTA-213ENST00000560127 UBE2V1Q13404 147 aa6.37□□□□□ -1.39
RABGGTA-213ENST00000560127 BATFQ16520 125 aa6.37□□□□□ -1.39
RABGGTA-213ENST00000560127 TRBV7-4A0A0J9YYF1 115 aa6.36□□□□□ -1.39
RABGGTA-213ENST00000560127 TAX1BP3O14907 124 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 102.4 ms