RNA–Protein interactions for RNA: ENST00000560107.6

LRRC49-221, Transcript of leucine rich repeat containing 49, humanhuman

TSL 5

Gene LRRC49, Length 2,721 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC49-221ENST00000560107 LCE6AA0A183 80 aa3.3□□□□□ -1.88
LRRC49-221ENST00000560107 ETDCA0A1B0GVM5 59 aa3.3□□□□□ -1.88
LRRC49-221ENST00000560107 K7EQZ3 153 aa3.3□□□□□ -1.88
LRRC49-221ENST00000560107 UBE2AP49459 152 aa3.3□□□□□ -1.88
LRRC49-221ENST00000560107 Q75L30 129 aa3.3□□□□□ -1.88
LRRC49-221ENST00000560107 TENM3Q9P273 2699 aa3.3□□□□□ -1.88
LRRC49-221ENST00000560107 hDV103S1A0JD37 113 aa3.29□□□□□ -1.88
LRRC49-221ENST00000560107 INAFM1C9JVW0 142 aa3.29□□□□□ -1.88
LRRC49-221ENST00000560107 LINC01556Q5JQF7 62 aa3.29□□□□□ -1.88
LRRC49-221ENST00000560107 ATP11AUNQ6ZP68 121 aa3.29□□□□□ -1.88
LRRC49-221ENST00000560107 KRTAP7-1Q8IUC3 87 aa3.29□□□□□ -1.88
LRRC49-221ENST00000560107 A0A0G2JQZ4 141 aa3.29□□□□□ -1.88
LRRC49-221ENST00000560107 A0A1B0GW54 56 aa3.29□□□□□ -1.88
LRRC49-221ENST00000560107 A0A1W2PNN7 141 aa3.29□□□□□ -1.88
LRRC49-221ENST00000560107 PSPHP1O15172 72 aa3.29□□□□□ -1.88
LRRC49-221ENST00000560107 C1orf64Q8NEQ6 169 aa3.29□□□□□ -1.88
LRRC49-221ENST00000560107 SPRR4Q96PI1 79 aa3.29□□□□□ -1.88
LRRC49-221ENST00000560107 NSD1Q96L73 2696 aaPredicted RBP3.28□□□□□ -1.88
LRRC49-221ENST00000560107 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.28□□□□□ -1.88
LRRC49-221ENST00000560107 SPRR1AP35321 89 aa3.28□□□□□ -1.88
LRRC49-221ENST00000560107 CASC10Q5T4H9 136 aa3.28□□□□□ -1.88
LRRC49-221ENST00000560107 ZCCHC13Q8WW36 166 aaKnown RBP3.28□□□□□ -1.88
LRRC49-221ENST00000560107 KRTAP9-9Q9BYP9 154 aa3.28□□□□□ -1.88
LRRC49-221ENST00000560107 KRTAP9-4Q9BYQ2 154 aa3.28□□□□□ -1.88
LRRC49-221ENST00000560107 PLA2G2DQ9UNK4 145 aa3.28□□□□□ -1.88
LRRC49-221ENST00000560107 TLX1NBP0CAT3 122 aa3.28□□□□□ -1.88
LRRC49-221ENST00000560107 PRR4Q16378 134 aa3.28□□□□□ -1.88
LRRC49-221ENST00000560107 DNAH10Q8IVF4 4471 aa3.28□□□□□ -1.88
LRRC49-221ENST00000560107 C16orf90A8MZG2 172 aa3.28□□□□□ -1.89
LRRC49-221ENST00000560107 DEFB116Q30KQ4 102 aa3.28□□□□□ -1.89
LRRC49-221ENST00000560107 DEFB131BA0A096LNP1 70 aa3.27□□□□□ -1.89
LRRC49-221ENST00000560107 KRTAP10-11P60412 298 aa3.27□□□□□ -1.89
LRRC49-221ENST00000560107 KRTAP4-7Q9BYR0 210 aa3.27□□□□□ -1.89
LRRC49-221ENST00000560107 F8P00451 2351 aa3.27□□□□□ -1.89
LRRC49-221ENST00000560107 IGLV5-37A0A075B6J1 123 aa3.27□□□□□ -1.89
LRRC49-221ENST00000560107 HCG22E2RYF7 251 aa3.27□□□□□ -1.89
LRRC49-221ENST00000560107 PSCAO43653 123 aa3.27□□□□□ -1.89
LRRC49-221ENST00000560107 LINC00476Q8WZB0 136 aa3.27□□□□□ -1.89
LRRC49-221ENST00000560107 BAHCC1Q9P281 2608 aa3.27□□□□□ -1.89
LRRC49-221ENST00000560107 CMYA5Q8N3K9 4069 aa3.26□□□□□ -1.89
LRRC49-221ENST00000560107 PRB2P02812 416 aaPredicted RBP3.26□□□□□ -1.89
LRRC49-221ENST00000560107 HECTD1Q9ULT8 2610 aa3.26□□□□□ -1.89
LRRC49-221ENST00000560107 IGHV6-1A0A0B4J1U7 121 aa3.26□□□□□ -1.89
LRRC49-221ENST00000560107 TRAV22A0A0B4J277 110 aa3.26□□□□□ -1.89
LRRC49-221ENST00000560107 DNAH10OSP0CZ25 163 aa3.26□□□□□ -1.89
LRRC49-221ENST00000560107 WFDC13Q8IUB5 93 aa3.26□□□□□ -1.89
LRRC49-221ENST00000560107 PLA2G1BP04054 148 aaKnown RBP3.25□□□□□ -1.89
LRRC49-221ENST00000560107 REG3GQ6UW15 175 aa3.25□□□□□ -1.89
LRRC49-221ENST00000560107 IGFL1Q6UW32 110 aa3.25□□□□□ -1.89
LRRC49-221ENST00000560107 DNAH9Q9NYC9 4486 aa3.24□□□□□ -1.89
LRRC49-221ENST00000560107 RPL37AP61513 92 aaKnown RBP3.24□□□□□ -1.89
LRRC49-221ENST00000560107 FLNBO75369 2602 aaKnown RBP3.24□□□□□ -1.89
LRRC49-221ENST00000560107 A0A087WSZ3 146 aa3.24□□□□□ -1.89
LRRC49-221ENST00000560107 PRLHP81277 87 aa3.24□□□□□ -1.89
LRRC49-221ENST00000560107 CYP4F30PQ9H0H9 118 aa3.24□□□□□ -1.89
LRRC49-221ENST00000560107 J3QKU1 62 aa3.23□□□□□ -1.89
LRRC49-221ENST00000560107 LINC00208Q96KT6 92 aa3.23□□□□□ -1.89
LRRC49-221ENST00000560107 HUWE1Q7Z6Z7 4374 aaKnown RBP3.23□□□□□ -1.89
LRRC49-221ENST00000560107 LYSTQ99698 3801 aa3.23□□□□□ -1.89
LRRC49-221ENST00000560107 SRRM2Q9UQ35 2752 aaKnown RBP3.22□□□□□ -1.89
LRRC49-221ENST00000560107 NDUFB1O75438 58 aa3.22□□□□□ -1.89
LRRC49-221ENST00000560107 Q5VV11 94 aa3.22□□□□□ -1.89
LRRC49-221ENST00000560107 IGKV2-24A0A0C4DH68 120 aa3.21□□□□□ -1.89
LRRC49-221ENST00000560107 CHKB-CPT1BH3BT56 60 aa3.21□□□□□ -1.89
LRRC49-221ENST00000560107 DNAH3Q8TD57 4116 aa3.21□□□□□ -1.9
LRRC49-221ENST00000560107 KRTAP29-1A8MX34 341 aaPredicted RBP3.21□□□□□ -1.9
LRRC49-221ENST00000560107 B9D2Q9BPU9 175 aa3.21□□□□□ -1.9
LRRC49-221ENST00000560107 CSMD3Q7Z407 3707 aa3.21□□□□□ -1.9
LRRC49-221ENST00000560107 A0A096LNI7 61 aa3.21□□□□□ -1.9
LRRC49-221ENST00000560107 PRAC1Q96KF2 57 aa3.21□□□□□ -1.9
LRRC49-221ENST00000560107 MAST4O15021 2626 aa3.2□□□□□ -1.9
LRRC49-221ENST00000560107 IGLV8-61A0A075B6I0 122 aa3.2□□□□□ -1.9
LRRC49-221ENST00000560107 H0Y9P7 68 aa3.2□□□□□ -1.9
LRRC49-221ENST00000560107 CASC2Q6XLA1 102 aa3.2□□□□□ -1.9
LRRC49-221ENST00000560107 CNBPP62633 177 aaKnown RBP3.2□□□□□ -1.9
LRRC49-221ENST00000560107 LCE1DQ5T752 114 aa3.19□□□□□ -1.9
LRRC49-221ENST00000560107 KRTAP11-1Q8IUC1 163 aa3.19□□□□□ -1.9
LRRC49-221ENST00000560107 NOTCH1P46531 2555 aa3.19□□□□□ -1.9
LRRC49-221ENST00000560107 KMT2BQ9UMN6 2715 aaPredicted RBP3.19□□□□□ -1.9
LRRC49-221ENST00000560107 FBN1P35555 2871 aaKnown RBP3.19□□□□□ -1.9
LRRC49-221ENST00000560107 STAB1Q9NY15 2570 aa3.19□□□□□ -1.9
LRRC49-221ENST00000560107 RETNLBQ9BQ08 111 aa3.18□□□□□ -1.9
LRRC49-221ENST00000560107 SPANXA2-OT1Q8N9U9 137 aa3.18□□□□□ -1.9
LRRC49-221ENST00000560107 LINC00472Q9H8W2 130 aa3.18□□□□□ -1.9
LRRC49-221ENST00000560107 A8MWP4 228 aa3.17□□□□□ -1.9
LRRC49-221ENST00000560107 CHTF8P0CG12 524 aa3.17□□□□□ -1.9
LRRC49-221ENST00000560107 Q8N9P0 234 aaPredicted RBP3.17□□□□□ -1.9
LRRC49-221ENST00000560107 MOBPQ13875 183 aa3.17□□□□□ -1.9
LRRC49-221ENST00000560107 C9orf163Q8N9P6 203 aa3.17□□□□□ -1.9
LRRC49-221ENST00000560107 KRTAP1-5Q9BYS1 174 aa3.17□□□□□ -1.9
LRRC49-221ENST00000560107 H3BPC8 53 aa3.16□□□□□ -1.9
LRRC49-221ENST00000560107 PRR15LQ9BU68 103 aa3.16□□□□□ -1.9
LRRC49-221ENST00000560107 NBEAL1Q6ZS30 2694 aa3.16□□□□□ -1.9
LRRC49-221ENST00000560107 COL6A5A8TX70 2615 aa3.16□□□□□ -1.9
LRRC49-221ENST00000560107 A6NED7 52 aa3.16□□□□□ -1.9
LRRC49-221ENST00000560107 CDC42SE1Q9NRR8 79 aa3.16□□□□□ -1.9
LRRC49-221ENST00000560107 TENM2Q9NT68 2774 aa3.16□□□□□ -1.9
LRRC49-221ENST00000560107 MMP24-AS1A0A0U1RRL7 71 aa3.15□□□□□ -1.9
LRRC49-221ENST00000560107 SPRR1BP22528 89 aa3.15□□□□□ -1.9
LRRC49-221ENST00000560107 LIMD2Q9BT23 127 aa3.15□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms