RNA–Protein interactions for RNA: ENST00000560070.5

USP3-217, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-217ENST00000560070 FXYD2P54710 66 aa4.93□□□□□ -1.62
USP3-217ENST00000560070 LINC00575Q6W349 94 aa4.93□□□□□ -1.62
USP3-217ENST00000560070 LAMTOR3Q9UHA4 124 aa4.93□□□□□ -1.62
USP3-217ENST00000560070 HMCN2Q8NDA2 5059 aa4.93□□□□□ -1.62
USP3-217ENST00000560070 TEX49A0A1B0GTD5 131 aa4.92□□□□□ -1.62
USP3-217ENST00000560070 hADV29S1A0JD25 119 aa4.92□□□□□ -1.62
USP3-217ENST00000560070 SPAG11AQ6PDA7 123 aa4.92□□□□□ -1.62
USP3-217ENST00000560070 UQCR10Q9UDW1 63 aa4.92□□□□□ -1.62
USP3-217ENST00000560070 A0A0G2JQZ4 141 aa4.91□□□□□ -1.62
USP3-217ENST00000560070 SPRR1BP22528 89 aa4.91□□□□□ -1.62
USP3-217ENST00000560070 LINC01547P58512 204 aaPredicted RBP4.91□□□□□ -1.62
USP3-217ENST00000560070 Q8N377 158 aa4.91□□□□□ -1.62
USP3-217ENST00000560070 NHP2Q9NX24 153 aaKnown RBP4.91□□□□□ -1.62
USP3-217ENST00000560070 PRO1854Q9UHT4 67 aa4.91□□□□□ -1.62
USP3-217ENST00000560070 A0A0B4J2C4 111 aa4.9□□□□□ -1.63
USP3-217ENST00000560070 TMEM238LA0A1B0GVL6 79 aa4.9□□□□□ -1.63
USP3-217ENST00000560070 A6NJY4 79 aa4.9□□□□□ -1.63
USP3-217ENST00000560070 HSD52Q0P140 79 aa4.9□□□□□ -1.63
USP3-217ENST00000560070 SMIM29Q86T20 159 aa4.9□□□□□ -1.63
USP3-217ENST00000560070 K7ERJ3 54 aa4.89□□□□□ -1.63
USP3-217ENST00000560070 SPINK1P00995 79 aa4.89□□□□□ -1.63
USP3-217ENST00000560070 BVES-AS1Q5T3Y7 98 aa4.89□□□□□ -1.63
USP3-217ENST00000560070 Q6ZQY7 126 aa4.89□□□□□ -1.63
USP3-217ENST00000560070 IGLV7-46A0A075B6I9 117 aa4.88□□□□□ -1.63
USP3-217ENST00000560070 KRTAP9-7A8MTY7 169 aa4.88□□□□□ -1.63
USP3-217ENST00000560070 IGLV5-48A0A075B6I7 105 aa4.87□□□□□ -1.63
USP3-217ENST00000560070 PSMB2P49721 201 aa4.87□□□□□ -1.63
USP3-217ENST00000560070 LOC105371267A0A1B0GV96 52 aa4.86□□□□□ -1.63
USP3-217ENST00000560070 H0YGX0 51 aa4.86□□□□□ -1.63
USP3-217ENST00000560070 CTAG1AP78358 180 aa4.86□□□□□ -1.63
USP3-217ENST00000560070 FAM218AQ96MZ4 157 aa4.86□□□□□ -1.63
USP3-217ENST00000560070 SNHG12Q9BXW3 62 aa4.86□□□□□ -1.63
USP3-217ENST00000560070 F8WEM9 126 aa4.85□□□□□ -1.63
USP3-217ENST00000560070 TRIAP1O43715 76 aa4.85□□□□□ -1.63
USP3-217ENST00000560070 SNCGO76070 127 aa4.85□□□□□ -1.63
USP3-217ENST00000560070 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.85□□□□□ -1.63
USP3-217ENST00000560070 CLEC2BQ92478 149 aa4.85□□□□□ -1.63
USP3-217ENST00000560070 SMIM6P0DI80 62 aa4.83□□□□□ -1.64
USP3-217ENST00000560070 FABP2P12104 132 aa4.83□□□□□ -1.64
USP3-217ENST00000560070 OCIAD2Q56VL3 154 aa4.83□□□□□ -1.64
USP3-217ENST00000560070 H3BUT2 72 aa4.82□□□□□ -1.64
USP3-217ENST00000560070 SCGB1C2P0DMR2 95 aa4.82□□□□□ -1.64
USP3-217ENST00000560070 CDIP1Q9H305 208 aa4.82□□□□□ -1.64
USP3-217ENST00000560070 NAA38Q9BRA0 125 aaKnown RBP4.81□□□□□ -1.64
USP3-217ENST00000560070 UBR4Q5T4S7 5183 aa4.8□□□□□ -1.64
USP3-217ENST00000560070 LPAP08519 4548 aa4.8□□□□□ -1.64
USP3-217ENST00000560070 A0A1B0GV72 72 aa4.8□□□□□ -1.64
USP3-217ENST00000560070 COX6CP09669 75 aa4.8□□□□□ -1.64
USP3-217ENST00000560070 RPS29P62273 56 aaKnown RBP4.8□□□□□ -1.64
USP3-217ENST00000560070 BATFQ16520 125 aa4.8□□□□□ -1.64
USP3-217ENST00000560070 FP248Q71RG6 208 aaPredicted RBP4.8□□□□□ -1.64
USP3-217ENST00000560070 LIMD2Q9BT23 127 aa4.8□□□□□ -1.64
USP3-217ENST00000560070 NDUFV3P56181 108 aaKnown RBP4.79□□□□□ -1.64
USP3-217ENST00000560070 IGFL1Q6UW32 110 aa4.79□□□□□ -1.64
USP3-217ENST00000560070 LRP2P98164 4655 aa4.79□□□□□ -1.64
USP3-217ENST00000560070 A0A1B0GX51 115 aa4.78□□□□□ -1.64
USP3-217ENST00000560070 TSTD3H0UI37 97 aa4.78□□□□□ -1.64
USP3-217ENST00000560070 M0R143 59 aa4.78□□□□□ -1.64
USP3-217ENST00000560070 DNAL4O96015 105 aa4.78□□□□□ -1.64
USP3-217ENST00000560070 CD164Q04900 197 aa4.78□□□□□ -1.64
USP3-217ENST00000560070 Q6JHZ5 121 aa4.78□□□□□ -1.64
USP3-217ENST00000560070 PPDPFLQ8WWR9 84 aa4.78□□□□□ -1.64
USP3-217ENST00000560070 H3BMG7 143 aa4.77□□□□□ -1.65
USP3-217ENST00000560070 TPRXLQ17RH7 258 aa4.77□□□□□ -1.65
USP3-217ENST00000560070 KRTAP13-3Q3SY46 172 aa4.77□□□□□ -1.65
USP3-217ENST00000560070 IGLV8-61A0A075B6I0 122 aa4.76□□□□□ -1.65
USP3-217ENST00000560070 C9orf92A6NGG3 77 aa4.76□□□□□ -1.65
USP3-217ENST00000560070 C1orf195Q5TG92 126 aa4.76□□□□□ -1.65
USP3-217ENST00000560070 ORMDL1Q9P0S3 153 aa4.76□□□□□ -1.65
USP3-217ENST00000560070 TCL1BO95988 128 aa4.75□□□□□ -1.65
USP3-217ENST00000560070 GHRHP01286 108 aa4.75□□□□□ -1.65
USP3-217ENST00000560070 TRBV7-7A0A0K0K1E9 115 aa4.74□□□□□ -1.65
USP3-217ENST00000560070 KRTAP9-3Q9BYQ3 159 aa4.74□□□□□ -1.65
USP3-217ENST00000560070 TMEM256-PLSCR3K7ERE1 68 aa4.73□□□□□ -1.65
USP3-217ENST00000560070 LST1O00453 97 aa4.73□□□□□ -1.65
USP3-217ENST00000560070 BAALC-AS2P0C853 105 aa4.73□□□□□ -1.65
USP3-217ENST00000560070 TRACP01848 142 aa4.72□□□□□ -1.65
USP3-217ENST00000560070 Q5XG85 94 aa4.72□□□□□ -1.65
USP3-217ENST00000560070 ANKRD29Q8N6D5 301 aa4.72□□□□□ -1.65
USP3-217ENST00000560070 H3BQ85 93 aa4.71□□□□□ -1.66
USP3-217ENST00000560070 A0A087WSZ3 146 aa4.7□□□□□ -1.66
USP3-217ENST00000560070 A0A1W2PNM2 257 aa4.7□□□□□ -1.66
USP3-217ENST00000560070 ATXN8Q156A1 80 aa4.7□□□□□ -1.66
USP3-217ENST00000560070 TEN1Q86WV5 123 aa4.7□□□□□ -1.66
USP3-217ENST00000560070 UBE2V1Q13404 147 aa4.69□□□□□ -1.66
USP3-217ENST00000560070 VPS25Q9BRG1 176 aa4.69□□□□□ -1.66
USP3-217ENST00000560070 RNF213Q63HN8 5207 aa4.69□□□□□ -1.66
USP3-217ENST00000560070 TAX1BP3O14907 124 aa4.68□□□□□ -1.66
USP3-217ENST00000560070 C9orf118A6NHY6 69 aa4.67□□□□□ -1.66
USP3-217ENST00000560070 PCP4L1A6NKN8 68 aa4.67□□□□□ -1.66
USP3-217ENST00000560070 RBM3P98179 157 aaKnown RBP4.67□□□□□ -1.66
USP3-217ENST00000560070 ASB16-AS1Q495Z4 193 aa4.67□□□□□ -1.66
USP3-217ENST00000560070 Q6Q795 121 aa4.67□□□□□ -1.66
USP3-217ENST00000560070 CCKP06307 115 aa4.66□□□□□ -1.66
USP3-217ENST00000560070 SEC61BP60468 96 aaKnown RBP4.66□□□□□ -1.66
USP3-217ENST00000560070 DEFB116Q30KQ4 102 aa4.66□□□□□ -1.66
USP3-217ENST00000560070 DSCR8Q96T75 97 aa4.66□□□□□ -1.66
USP3-217ENST00000560070 SS18L2Q9UHA2 77 aa4.66□□□□□ -1.66
USP3-217ENST00000560070 C9JAW5 83 aa4.65□□□□□ -1.67
USP3-217ENST00000560070 LYRM7Q5U5X0 104 aa4.65□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 93.7 ms