RNA–Protein interactions for RNA: ENST00000559715.1

HERC1-204, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 495 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-204ENST00000559715 HSD52Q0P140 79 aa6.05□□□□□ -1.44
HERC1-204ENST00000559715 A0A0B4J2C4 111 aa6.04□□□□□ -1.44
HERC1-204ENST00000559715 ELOF1P60002 83 aaKnown RBP6.04□□□□□ -1.44
HERC1-204ENST00000559715 C6orf99Q4VX62 202 aa6.04□□□□□ -1.44
HERC1-204ENST00000559715 CEND1Q8N111 149 aa6.04□□□□□ -1.44
HERC1-204ENST00000559715 A0A1B0GWB2 263 aa6.02□□□□□ -1.45
HERC1-204ENST00000559715 CFC1BP0CG36 223 aa6.02□□□□□ -1.45
HERC1-204ENST00000559715 CFC1P0CG37 223 aa6.02□□□□□ -1.45
HERC1-204ENST00000559715 SMIM11BQ8TCY0 68 aa6.02□□□□□ -1.45
HERC1-204ENST00000559715 C12orf57Q99622 126 aa6.02□□□□□ -1.45
HERC1-204ENST00000559715 DHRS4-AS1Q9P1J3 65 aa6.02□□□□□ -1.45
HERC1-204ENST00000559715 COX7BP24311 80 aa6.01□□□□□ -1.45
HERC1-204ENST00000559715 FXYD2P54710 66 aa6.01□□□□□ -1.45
HERC1-204ENST00000559715 ST20-AS1Q8NBB2 130 aa6.01□□□□□ -1.45
HERC1-204ENST00000559715 KRTAP10-6P60371 365 aaPredicted RBP6□□□□□ -1.45
HERC1-204ENST00000559715 PCOTHQ58A44 107 aa6□□□□□ -1.45
HERC1-204ENST00000559715 RAB37Q96AX2 223 aa5.99□□□□□ -1.45
HERC1-204ENST00000559715 PRO1933Q9H354 126 aa5.98□□□□□ -1.45
HERC1-204ENST00000559715 SPRR1BP22528 89 aa5.97□□□□□ -1.45
HERC1-204ENST00000559715 VAMP3Q15836 100 aa5.97□□□□□ -1.45
HERC1-204ENST00000559715 BVES-AS1Q5T3Y7 98 aa5.97□□□□□ -1.45
HERC1-204ENST00000559715 NHP2Q9NX24 153 aaKnown RBP5.97□□□□□ -1.45
HERC1-204ENST00000559715 PRO1854Q9UHT4 67 aa5.97□□□□□ -1.45
HERC1-204ENST00000559715 IGLV8-61A0A075B6I0 122 aa5.96□□□□□ -1.46
HERC1-204ENST00000559715 TSTD3H0UI37 97 aa5.96□□□□□ -1.46
HERC1-204ENST00000559715 LINC00575Q6W349 94 aa5.95□□□□□ -1.46
HERC1-204ENST00000559715 IGLV5-48A0A075B6I7 105 aa5.94□□□□□ -1.46
HERC1-204ENST00000559715 C9orf92A6NGG3 77 aa5.94□□□□□ -1.46
HERC1-204ENST00000559715 M0R143 59 aa5.94□□□□□ -1.46
HERC1-204ENST00000559715 C9orf153Q5TBE3 101 aa5.94□□□□□ -1.46
HERC1-204ENST00000559715 H7C2G1 150 aa5.93□□□□□ -1.46
HERC1-204ENST00000559715 H0YGX0 51 aa5.92□□□□□ -1.46
HERC1-204ENST00000559715 K7ERJ3 54 aa5.92□□□□□ -1.46
HERC1-204ENST00000559715 hADV29S1A0JD25 119 aa5.91□□□□□ -1.46
HERC1-204ENST00000559715 Q1RN00 199 aa5.91□□□□□ -1.46
HERC1-204ENST00000559715 TEX49A0A1B0GTD5 131 aa5.9□□□□□ -1.46
HERC1-204ENST00000559715 A0A1B0GX51 115 aa5.9□□□□□ -1.46
HERC1-204ENST00000559715 TRIAP1O43715 76 aa5.9□□□□□ -1.46
HERC1-204ENST00000559715 HRCT1Q6UXD1 115 aa5.9□□□□□ -1.46
HERC1-204ENST00000559715 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.9□□□□□ -1.46
HERC1-204ENST00000559715 Q6ZQY7 126 aa5.89□□□□□ -1.47
HERC1-204ENST00000559715 PPDPFLQ8WWR9 84 aa5.89□□□□□ -1.47
HERC1-204ENST00000559715 SSPOA2VEC9 5147 aa5.88□□□□□ -1.47
HERC1-204ENST00000559715 USH2AO75445 5202 aa5.88□□□□□ -1.47
HERC1-204ENST00000559715 CD164Q04900 197 aa5.88□□□□□ -1.47
HERC1-204ENST00000559715 Q5XG85 94 aa5.88□□□□□ -1.47
HERC1-204ENST00000559715 SMIM29Q86T20 159 aa5.88□□□□□ -1.47
HERC1-204ENST00000559715 LIMD2Q9BT23 127 aa5.88□□□□□ -1.47
HERC1-204ENST00000559715 LAMTOR3Q9UHA4 124 aa5.88□□□□□ -1.47
HERC1-204ENST00000559715 SNCGO76070 127 aa5.87□□□□□ -1.47
HERC1-204ENST00000559715 C1orf195Q5TG92 126 aa5.87□□□□□ -1.47
HERC1-204ENST00000559715 FAM218AQ96MZ4 157 aa5.87□□□□□ -1.47
HERC1-204ENST00000559715 A0A0G2JQZ4 141 aa5.86□□□□□ -1.47
HERC1-204ENST00000559715 COX6CP09669 75 aa5.86□□□□□ -1.47
HERC1-204ENST00000559715 RPL37P61927 97 aaKnown RBP5.86□□□□□ -1.47
HERC1-204ENST00000559715 OCIAD2Q56VL3 154 aa5.86□□□□□ -1.47
HERC1-204ENST00000559715 KRTAP4-8Q9BYQ9 185 aa5.86□□□□□ -1.47
HERC1-204ENST00000559715 PSMB2P49721 201 aa5.85□□□□□ -1.47
HERC1-204ENST00000559715 DEFB105AQ8NG35 78 aa5.85□□□□□ -1.47
HERC1-204ENST00000559715 CLEC2BQ92478 149 aa5.83□□□□□ -1.48
HERC1-204ENST00000559715 PCP4L1A6NKN8 68 aa5.82□□□□□ -1.48
HERC1-204ENST00000559715 H3BQ85 93 aa5.81□□□□□ -1.48
HERC1-204ENST00000559715 M0R2T5 61 aa5.81□□□□□ -1.48
HERC1-204ENST00000559715 LST1O00453 97 aa5.81□□□□□ -1.48
HERC1-204ENST00000559715 TRACP01848 142 aa5.81□□□□□ -1.48
HERC1-204ENST00000559715 F8WEM9 126 aa5.8□□□□□ -1.48
HERC1-204ENST00000559715 DNAL4O96015 105 aa5.8□□□□□ -1.48
HERC1-204ENST00000559715 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.79□□□□□ -1.48
HERC1-204ENST00000559715 SCGB1C2P0DMR2 95 aa5.79□□□□□ -1.48
HERC1-204ENST00000559715 BATFQ16520 125 aa5.79□□□□□ -1.48
HERC1-204ENST00000559715 LYRM7Q5U5X0 104 aa5.79□□□□□ -1.48
HERC1-204ENST00000559715 Q6JHZ5 121 aa5.79□□□□□ -1.48
HERC1-204ENST00000559715 KRTAP19-4Q3LI73 84 aa5.78□□□□□ -1.48
HERC1-204ENST00000559715 SNHG12Q9BXW3 62 aa5.78□□□□□ -1.48
HERC1-204ENST00000559715 KRTAP9-8Q9BYQ0 159 aa5.78□□□□□ -1.48
HERC1-204ENST00000559715 ORMDL1Q9P0S3 153 aa5.78□□□□□ -1.48
HERC1-204ENST00000559715 FCGBPQ9Y6R7 5405 aaPredicted RBP5.77□□□□□ -1.49
HERC1-204ENST00000559715 KRTAP9-7A8MTY7 169 aa5.76□□□□□ -1.49
HERC1-204ENST00000559715 TMEM256-PLSCR3K7ERE1 68 aa5.76□□□□□ -1.49
HERC1-204ENST00000559715 TAX1BP3O14907 124 aa5.76□□□□□ -1.49
HERC1-204ENST00000559715 NDUFV3P56181 108 aaKnown RBP5.76□□□□□ -1.49
HERC1-204ENST00000559715 COX6B2Q6YFQ2 88 aa5.76□□□□□ -1.49
HERC1-204ENST00000559715 KRTAP19-1Q8IUB9 90 aa5.76□□□□□ -1.49
HERC1-204ENST00000559715 KRTAP4-12Q9BQ66 201 aa5.76□□□□□ -1.49
HERC1-204ENST00000559715 NAA38Q9BRA0 125 aaKnown RBP5.76□□□□□ -1.49
HERC1-204ENST00000559715 TRBV20-1A0A075B6N2 111 aa5.75□□□□□ -1.49
HERC1-204ENST00000559715 C9orf118A6NHY6 69 aa5.75□□□□□ -1.49
HERC1-204ENST00000559715 UBE2V1Q13404 147 aa5.75□□□□□ -1.49
HERC1-204ENST00000559715 ATXN8Q156A1 80 aa5.75□□□□□ -1.49
HERC1-204ENST00000559715 IGFL1Q6UW32 110 aa5.75□□□□□ -1.49
HERC1-204ENST00000559715 H3BUT2 72 aa5.74□□□□□ -1.49
HERC1-204ENST00000559715 TCL1BO95988 128 aa5.74□□□□□ -1.49
HERC1-204ENST00000559715 FABP2P12104 132 aa5.74□□□□□ -1.49
HERC1-204ENST00000559715 COL5A1-AS1Q5SY13 56 aa5.73□□□□□ -1.49
HERC1-204ENST00000559715 Q6Q795 121 aa5.73□□□□□ -1.49
HERC1-204ENST00000559715 A0A1W2PPM0 123 aa5.72□□□□□ -1.49
HERC1-204ENST00000559715 H3BMG7 143 aa5.72□□□□□ -1.49
HERC1-204ENST00000559715 TRBV7-7A0A0K0K1E9 115 aa5.7□□□□□ -1.5
HERC1-204ENST00000559715 BAALC-AS2P0C853 105 aa5.69□□□□□ -1.5
HERC1-204ENST00000559715 Q75L30 129 aa5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms