RNA–Protein interactions for RNA: ENST00000559100.1

GABPB1-209, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 3

Gene GABPB1, Length 290 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-209ENST00000559100 LMTK2Q8IWU2 1503 aa-0.03□□□□□ -2.41
GABPB1-209ENST00000559100 TNRC18O15417 2968 aaPredicted RBP-0.03□□□□□ -2.41
GABPB1-209ENST00000559100 CREBBPQ92793 2442 aa-0.04□□□□□ -2.42
GABPB1-209ENST00000559100 DSPP15924 2871 aaKnown RBP-0.04□□□□□ -2.42
GABPB1-209ENST00000559100 IAPPP10997 89 aa-0.04□□□□□ -2.42
GABPB1-209ENST00000559100 ATXN8Q156A1 80 aa-0.04□□□□□ -2.42
GABPB1-209ENST00000559100 PLXNC1O60486 1568 aa-0.05□□□□□ -2.42
GABPB1-209ENST00000559100 ABCA8O94911 1581 aa-0.05□□□□□ -2.42
GABPB1-209ENST00000559100 PDZD2O15018 2839 aa-0.05□□□□□ -2.42
GABPB1-209ENST00000559100 H3BNG1 76 aa-0.05□□□□□ -2.42
GABPB1-209ENST00000559100 DEFB130BP0DP73 79 aa-0.05□□□□□ -2.42
GABPB1-209ENST00000559100 DEFB130AP0DP74 79 aa-0.05□□□□□ -2.42
GABPB1-209ENST00000559100 HILPDAQ9Y5L2 63 aa-0.05□□□□□ -2.42
GABPB1-209ENST00000559100 DEPDC5O75140 1603 aa-0.05□□□□□ -2.42
GABPB1-209ENST00000559100 NF1P21359 2839 aa-0.06□□□□□ -2.42
GABPB1-209ENST00000559100 SETD2Q9BYW2 2564 aaPredicted RBP-0.06□□□□□ -2.42
GABPB1-209ENST00000559100 LYNX1G3V0Z9 82 aa-0.06□□□□□ -2.42
GABPB1-209ENST00000559100 LRP1BQ9NZR2 4599 aa-0.06□□□□□ -2.42
GABPB1-209ENST00000559100 LYSTQ99698 3801 aa-0.06□□□□□ -2.42
GABPB1-209ENST00000559100 SVEP1Q4LDE5 3571 aa-0.06□□□□□ -2.42
GABPB1-209ENST00000559100 TGP01266 2768 aa-0.06□□□□□ -2.42
GABPB1-209ENST00000559100 SPTBN4Q9H254 2564 aa-0.06□□□□□ -2.42
GABPB1-209ENST00000559100 WIZO95785 1651 aa-0.07□□□□□ -2.42
GABPB1-209ENST00000559100 CD163L1Q9NR16 1453 aa-0.07□□□□□ -2.42
GABPB1-209ENST00000559100 STAB2Q8WWQ8 2551 aa-0.07□□□□□ -2.42
GABPB1-209ENST00000559100 HTTP42858 3142 aa-0.07□□□□□ -2.42
GABPB1-209ENST00000559100 NBASA2RRP1 2371 aa-0.07□□□□□ -2.42
GABPB1-209ENST00000559100 KCNQ1DNQ9H478 68 aa-0.07□□□□□ -2.42
GABPB1-209ENST00000559100 DUOX2Q9NRD8 1548 aa-0.08□□□□□ -2.42
GABPB1-209ENST00000559100 UGGT2Q9NYU1 1516 aa-0.08□□□□□ -2.42
GABPB1-209ENST00000559100 SYNE2Q8WXH0 6885 aaKnown RBP-0.08□□□□□ -2.42
GABPB1-209ENST00000559100 SRRM2Q9UQ35 2752 aaKnown RBP-0.08□□□□□ -2.42
GABPB1-209ENST00000559100 ETDCA0A1B0GVM5 59 aa-0.08□□□□□ -2.42
GABPB1-209ENST00000559100 CRIP1P50238 77 aa-0.08□□□□□ -2.42
GABPB1-209ENST00000559100 THOC2Q8NI27 1593 aaKnown RBP-0.08□□□□□ -2.42
GABPB1-209ENST00000559100 MYO5CQ9NQX4 1742 aa-0.08□□□□□ -2.42
GABPB1-209ENST00000559100 FSIP2Q5CZC0 6907 aa-0.08□□□□□ -2.42
GABPB1-209ENST00000559100 EIF2AK4Q9P2K8 1649 aaKnown RBP-0.09□□□□□ -2.42
GABPB1-209ENST00000559100 ITSN1Q15811 1721 aa-0.09□□□□□ -2.42
GABPB1-209ENST00000559100 SPRR2AP35326 72 aa-0.09□□□□□ -2.42
GABPB1-209ENST00000559100 PRLHP81277 87 aa-0.09□□□□□ -2.42
GABPB1-209ENST00000559100 KRTAP6-1Q3LI64 71 aa-0.09□□□□□ -2.42
GABPB1-209ENST00000559100 PKHD1P08F94 4074 aa-0.09□□□□□ -2.42
GABPB1-209ENST00000559100 ZZEF1O43149 2961 aa-0.09□□□□□ -2.42
GABPB1-209ENST00000559100 LRRIQ1Q96JM4 1722 aa-0.1□□□□□ -2.42
GABPB1-209ENST00000559100 DIP2AQ14689 1571 aa-0.1□□□□□ -2.42
GABPB1-209ENST00000559100 SSPOA2VEC9 5147 aa-0.1□□□□□ -2.43
GABPB1-209ENST00000559100 KRTAP6-2Q3LI66 62 aa-0.1□□□□□ -2.43
GABPB1-209ENST00000559100 MINOS1Q5TGZ0 78 aa-0.1□□□□□ -2.43
GABPB1-209ENST00000559100 DEFB106AQ8N104 65 aa-0.1□□□□□ -2.43
GABPB1-209ENST00000559100 FLGP20930 4061 aaPredicted RBP-0.1□□□□□ -2.43
GABPB1-209ENST00000559100 MUC2Q02817 5179 aa-0.1□□□□□ -2.43
GABPB1-209ENST00000559100 IQGAP3Q86VI3 1631 aa-0.1□□□□□ -2.43
GABPB1-209ENST00000559100 TJP1Q07157 1748 aa-0.1□□□□□ -2.43
GABPB1-209ENST00000559100 DMXL1Q9Y485 3027 aa-0.11□□□□□ -2.43
GABPB1-209ENST00000559100 HIVEP1P15822 2718 aa-0.11□□□□□ -2.43
GABPB1-209ENST00000559100 KIAA0586Q9BVV6 1533 aa-0.11□□□□□ -2.43
GABPB1-209ENST00000559100 C9orf92A6NGG3 77 aa-0.11□□□□□ -2.43
GABPB1-209ENST00000559100 MACF1Q9UPN3 7388 aaKnown RBP-0.11□□□□□ -2.43
GABPB1-209ENST00000559100 CUBNO60494 3623 aa-0.12□□□□□ -2.43
GABPB1-209ENST00000559100 AKAP9Q99996 3911 aa-0.12□□□□□ -2.43
GABPB1-209ENST00000559100 PARP4Q9UKK3 1724 aaKnown RBP-0.12□□□□□ -2.43
GABPB1-209ENST00000559100 CDC42BPGQ6DT37 1551 aa-0.12□□□□□ -2.43
GABPB1-209ENST00000559100 MXRA5Q9NR99 2828 aa-0.12□□□□□ -2.43
GABPB1-209ENST00000559100 KALRNO60229 2985 aa-0.12□□□□□ -2.43
GABPB1-209ENST00000559100 NRAPQ86VF7 1730 aa-0.13□□□□□ -2.43
GABPB1-209ENST00000559100 KRTAP19-7Q3SYF9 63 aa-0.13□□□□□ -2.43
GABPB1-209ENST00000559100 NBPF19A0A087WUL8 3843 aa-0.13□□□□□ -2.43
GABPB1-209ENST00000559100 RNF17Q9BXT8 1623 aaKnown RBP-0.13□□□□□ -2.43
GABPB1-209ENST00000559100 ASXL1Q8IXJ9 1541 aa-0.13□□□□□ -2.43
GABPB1-209ENST00000559100 SPG11Q96JI7 2443 aa-0.14□□□□□ -2.43
GABPB1-209ENST00000559100 ZC3H13Q5T200 1668 aaKnown RBP-0.14□□□□□ -2.43
GABPB1-209ENST00000559100 ANKRD11Q6UB99 2663 aaPredicted RBP-0.14□□□□□ -2.43
GABPB1-209ENST00000559100 FCER1GP30273 86 aa-0.14□□□□□ -2.43
GABPB1-209ENST00000559100 S4R3F8 94 aa-0.14□□□□□ -2.43
GABPB1-209ENST00000559100 PKD1P98161 4303 aa-0.14□□□□□ -2.43
GABPB1-209ENST00000559100 SONP18583 2426 aaKnown RBP-0.14□□□□□ -2.43
GABPB1-209ENST00000559100 GCN1Q92616 2671 aaKnown RBP-0.14□□□□□ -2.43
GABPB1-209ENST00000559100 BPTFQ12830 3046 aa-0.15□□□□□ -2.43
GABPB1-209ENST00000559100 TACC2O95359 2948 aa-0.15□□□□□ -2.43
GABPB1-209ENST00000559100 LINC01549A6NIU2 74 aa-0.15□□□□□ -2.43
GABPB1-209ENST00000559100 WT1-ASQ06250 92 aa-0.15□□□□□ -2.43
GABPB1-209ENST00000559100 DEFB114Q30KQ6 69 aa-0.15□□□□□ -2.43
GABPB1-209ENST00000559100 C6orf48Q9UBA6 75 aa-0.15□□□□□ -2.43
GABPB1-209ENST00000559100 NHSQ6T4R5 1651 aa-0.15□□□□□ -2.43
GABPB1-209ENST00000559100 LAMA5O15230 3695 aa-0.15□□□□□ -2.43
GABPB1-209ENST00000559100 UTP20O75691 2785 aaKnown RBP-0.16□□□□□ -2.43
GABPB1-209ENST00000559100 ABCA9Q8IUA7 1624 aa-0.16□□□□□ -2.43
GABPB1-209ENST00000559100 EPG5Q9HCE0 2579 aa-0.16□□□□□ -2.43
GABPB1-209ENST00000559100 ABCC6O95255 1503 aa-0.16□□□□□ -2.43
GABPB1-209ENST00000559100 SPRR2EP22531 72 aa-0.16□□□□□ -2.44
GABPB1-209ENST00000559100 NCBP2-AS2Q69YL0 99 aa-0.16□□□□□ -2.44
GABPB1-209ENST00000559100 TIMM8BQ9Y5J9 83 aaPredicted RBP-0.16□□□□□ -2.44
GABPB1-209ENST00000559100 DNMBPQ6XZF7 1577 aa-0.16□□□□□ -2.44
GABPB1-209ENST00000559100 INO80Q9ULG1 1556 aaPredicted RBP-0.16□□□□□ -2.44
GABPB1-209ENST00000559100 VPS13BQ7Z7G8 4022 aa-0.16□□□□□ -2.44
GABPB1-209ENST00000559100 FASNP49327 2511 aaKnown RBP-0.17□□□□□ -2.44
GABPB1-209ENST00000559100 DNAH9Q9NYC9 4486 aa-0.17□□□□□ -2.44
GABPB1-209ENST00000559100 CEP290O15078 2479 aa-0.17□□□□□ -2.44
GABPB1-209ENST00000559100 MTORP42345 2549 aa-0.18□□□□□ -2.44
Retrieved 100 of 20,778 RNA–protein pairs in 150 ms