RNA–Protein interactions for RNA: ENST00000559002.5

CHRNA3-204, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 1 (best)

Gene CHRNA3, Length 333 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-204ENST00000559002 TRACP01848 142 aa3.93□□□□□ -1.78
CHRNA3-204ENST00000559002 ATXN8Q156A1 80 aa3.93□□□□□ -1.78
CHRNA3-204ENST00000559002 OCIAD2Q56VL3 154 aa3.93□□□□□ -1.78
CHRNA3-204ENST00000559002 PRR26Q8N8Z3 221 aa3.93□□□□□ -1.78
CHRNA3-204ENST00000559002 LINC01600Q96MT4 127 aa3.93□□□□□ -1.78
CHRNA3-204ENST00000559002 LAMTOR3Q9UHA4 124 aa3.93□□□□□ -1.78
CHRNA3-204ENST00000559002 TRBV20-1A0A075B6N2 111 aa3.92□□□□□ -1.78
CHRNA3-204ENST00000559002 A0A087X002 238 aa3.92□□□□□ -1.78
CHRNA3-204ENST00000559002 IGLV9-49A0A0B4J1Y8 123 aa3.92□□□□□ -1.78
CHRNA3-204ENST00000559002 F8WEM9 126 aa3.92□□□□□ -1.78
CHRNA3-204ENST00000559002 TCL1BO95988 128 aa3.92□□□□□ -1.78
CHRNA3-204ENST00000559002 SPRR1BP22528 89 aa3.92□□□□□ -1.78
CHRNA3-204ENST00000559002 LINC01547P58512 204 aaPredicted RBP3.92□□□□□ -1.78
CHRNA3-204ENST00000559002 C9orf153Q5TBE3 101 aa3.92□□□□□ -1.78
CHRNA3-204ENST00000559002 PPDPFLQ8WWR9 84 aa3.92□□□□□ -1.78
CHRNA3-204ENST00000559002 ORMDL1Q9P0S3 153 aa3.92□□□□□ -1.78
CHRNA3-204ENST00000559002 KRTAP29-1A8MX34 341 aaPredicted RBP3.91□□□□□ -1.78
CHRNA3-204ENST00000559002 H3BQ85 93 aa3.91□□□□□ -1.78
CHRNA3-204ENST00000559002 J3QL48 77 aa3.91□□□□□ -1.78
CHRNA3-204ENST00000559002 Q8N377 158 aa3.91□□□□□ -1.78
CHRNA3-204ENST00000559002 C3orf22Q8N5N4 141 aa3.91□□□□□ -1.78
CHRNA3-204ENST00000559002 TYMSOSQ8TAI1 123 aa3.91□□□□□ -1.78
CHRNA3-204ENST00000559002 MOBPQ13875 183 aa3.9□□□□□ -1.79
CHRNA3-204ENST00000559002 KRTAP13-2Q52LG2 175 aa3.9□□□□□ -1.79
CHRNA3-204ENST00000559002 Q8NBF4 154 aa3.9□□□□□ -1.79
CHRNA3-204ENST00000559002 SPCS1Q9Y6A9 102 aa3.9□□□□□ -1.79
CHRNA3-204ENST00000559002 TMEM256-PLSCR3K7ERE1 68 aa3.89□□□□□ -1.79
CHRNA3-204ENST00000559002 SMIM29Q86T20 159 aa3.89□□□□□ -1.79
CHRNA3-204ENST00000559002 C9JAW5 83 aa3.88□□□□□ -1.79
CHRNA3-204ENST00000559002 BAALC-AS2P0C853 105 aa3.88□□□□□ -1.79
CHRNA3-204ENST00000559002 NDUFV3P56181 108 aaKnown RBP3.88□□□□□ -1.79
CHRNA3-204ENST00000559002 KRTAP10-8P60410 259 aa3.88□□□□□ -1.79
CHRNA3-204ENST00000559002 SSBP3-AS1Q7Z2R9 100 aa3.88□□□□□ -1.79
CHRNA3-204ENST00000559002 H3BMG7 143 aa3.87□□□□□ -1.79
CHRNA3-204ENST00000559002 K7EP34 96 aa3.87□□□□□ -1.79
CHRNA3-204ENST00000559002 MT1HL1P0DM35 61 aa3.87□□□□□ -1.79
CHRNA3-204ENST00000559002 C4orf48Q5BLP8 95 aa3.87□□□□□ -1.79
CHRNA3-204ENST00000559002 GTF2H5Q6ZYL4 71 aa3.87□□□□□ -1.79
CHRNA3-204ENST00000559002 LINC00304Q8N9R0 145 aa3.87□□□□□ -1.79
CHRNA3-204ENST00000559002 A0A1B0GV72 72 aa3.86□□□□□ -1.79
CHRNA3-204ENST00000559002 UBE2V1Q13404 147 aa3.86□□□□□ -1.79
CHRNA3-204ENST00000559002 Q6JHZ5 121 aa3.86□□□□□ -1.79
CHRNA3-204ENST00000559002 ANKRD29Q8N6D5 301 aa3.86□□□□□ -1.79
CHRNA3-204ENST00000559002 IGLV8-61A0A075B6I0 122 aa3.85□□□□□ -1.79
CHRNA3-204ENST00000559002 H3BT86 120 aa3.85□□□□□ -1.79
CHRNA3-204ENST00000559002 SPAG11AQ6PDA7 123 aa3.85□□□□□ -1.79
CHRNA3-204ENST00000559002 MTURNQ8N3F0 131 aa3.85□□□□□ -1.79
CHRNA3-204ENST00000559002 KRTAP4-8Q9BYQ9 185 aa3.84□□□□□ -1.79
CHRNA3-204ENST00000559002 HERC1Q15751 4861 aa3.84□□□□□ -1.8
CHRNA3-204ENST00000559002 A0A0G2JQZ4 141 aa3.83□□□□□ -1.8
CHRNA3-204ENST00000559002 JMJD7-PLA2G4BH0Y9G9 81 aa3.83□□□□□ -1.8
CHRNA3-204ENST00000559002 RBM3P98179 157 aaKnown RBP3.83□□□□□ -1.8
CHRNA3-204ENST00000559002 IGFL1Q6UW32 110 aa3.83□□□□□ -1.8
CHRNA3-204ENST00000559002 HRCT1Q6UXD1 115 aa3.83□□□□□ -1.8
CHRNA3-204ENST00000559002 DSCR8Q96T75 97 aa3.83□□□□□ -1.8
CHRNA3-204ENST00000559002 A0A1B0GV90 55 aa3.82□□□□□ -1.8
CHRNA3-204ENST00000559002 SPINK1P00995 79 aa3.82□□□□□ -1.8
CHRNA3-204ENST00000559002 CD164Q04900 197 aa3.82□□□□□ -1.8
CHRNA3-204ENST00000559002 LIMD2Q9BT23 127 aa3.82□□□□□ -1.8
CHRNA3-204ENST00000559002 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.81□□□□□ -1.8
CHRNA3-204ENST00000559002 SMCPP49901 116 aaPredicted RBP3.81□□□□□ -1.8
CHRNA3-204ENST00000559002 TRBV7-4A0A0J9YYF1 115 aa3.8□□□□□ -1.8
CHRNA3-204ENST00000559002 F8W1H4 67 aa3.8□□□□□ -1.8
CHRNA3-204ENST00000559002 RPS29P62273 56 aaKnown RBP3.8□□□□□ -1.8
CHRNA3-204ENST00000559002 TEN1Q86WV5 123 aa3.8□□□□□ -1.8
CHRNA3-204ENST00000559002 VPS25Q9BRG1 176 aa3.8□□□□□ -1.8
CHRNA3-204ENST00000559002 C14orf132Q9NPU4 83 aa3.8□□□□□ -1.8
CHRNA3-204ENST00000559002 PRO0461Q9UI25 63 aa3.8□□□□□ -1.8
CHRNA3-204ENST00000559002 TRBV7-7A0A0K0K1E9 115 aa3.79□□□□□ -1.8
CHRNA3-204ENST00000559002 CCKP06307 115 aa3.79□□□□□ -1.8
CHRNA3-204ENST00000559002 PDE6GP18545 87 aa3.79□□□□□ -1.8
CHRNA3-204ENST00000559002 C21orf62-AS1Q17RA5 79 aa3.79□□□□□ -1.8
CHRNA3-204ENST00000559002 Q6Q795 121 aa3.79□□□□□ -1.8
CHRNA3-204ENST00000559002 SS18L2Q9UHA2 77 aa3.79□□□□□ -1.8
CHRNA3-204ENST00000559002 LOC110117498A0A087WWA1 95 aa3.78□□□□□ -1.8
CHRNA3-204ENST00000559002 A0A1W2PNM2 257 aa3.78□□□□□ -1.8
CHRNA3-204ENST00000559002 OBSCN-AS1Q96MR7 158 aa3.78□□□□□ -1.8
CHRNA3-204ENST00000559002 A0A087WSZ3 146 aa3.77□□□□□ -1.81
CHRNA3-204ENST00000559002 LCE2CQ5TA81 110 aa3.77□□□□□ -1.81
CHRNA3-204ENST00000559002 Q6ZQT0 140 aa3.77□□□□□ -1.81
CHRNA3-204ENST00000559002 RETNLBQ9BQ08 111 aa3.77□□□□□ -1.81
CHRNA3-204ENST00000559002 KRTAP9-2Q9BYQ4 174 aa3.77□□□□□ -1.81
CHRNA3-204ENST00000559002 HMCN2Q8NDA2 5059 aa3.76□□□□□ -1.81
CHRNA3-204ENST00000559002 KRTAP9-6A0A140TA67 174 aa3.76□□□□□ -1.81
CHRNA3-204ENST00000559002 PRR4Q16378 134 aa3.76□□□□□ -1.81
CHRNA3-204ENST00000559002 ETDBQ3ZM63 59 aa3.76□□□□□ -1.81
CHRNA3-204ENST00000559002 Q5XG85 94 aa3.76□□□□□ -1.81
CHRNA3-204ENST00000559002 A0A1B0GW54 56 aa3.74□□□□□ -1.81
CHRNA3-204ENST00000559002 XP32Q5T750 250 aa3.74□□□□□ -1.81
CHRNA3-204ENST00000559002 FP248Q71RG6 208 aaPredicted RBP3.74□□□□□ -1.81
CHRNA3-204ENST00000559002 ASB16-AS1Q495Z4 193 aa3.73□□□□□ -1.81
CHRNA3-204ENST00000559002 C1orf195Q5TG92 126 aa3.73□□□□□ -1.81
CHRNA3-204ENST00000559002 IGLV7-46A0A075B6I9 117 aa3.72□□□□□ -1.81
CHRNA3-204ENST00000559002 NREPQ16612 68 aa3.71□□□□□ -1.82
CHRNA3-204ENST00000559002 SIGMAR1Q99720 223 aa3.71□□□□□ -1.82
CHRNA3-204ENST00000559002 IGKV4-1P06312 121 aa3.69□□□□□ -1.82
CHRNA3-204ENST00000559002 LORP23490 312 aaPredicted RBP3.69□□□□□ -1.82
CHRNA3-204ENST00000559002 DEFB116Q30KQ4 102 aa3.69□□□□□ -1.82
CHRNA3-204ENST00000559002 Q96NJ1 140 aa3.69□□□□□ -1.82
CHRNA3-204ENST00000559002 J3KT08 172 aa3.68□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms