RNA–Protein interactions for RNA: ENST00000558911.1

LRRC28-212, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 490 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-212ENST00000558911 PI4KAP42356 2102 aa1.54□□□□□ -2.16
LRRC28-212ENST00000558911 INTS1Q8N201 2190 aaKnown RBP1.54□□□□□ -2.16
LRRC28-212ENST00000558911 IGKV2-40A0A087WW87 121 aaPredicted RBP1.54□□□□□ -2.16
LRRC28-212ENST00000558911 HMGN4O00479 90 aa1.54□□□□□ -2.16
LRRC28-212ENST00000558911 IGKV2D-40P01614 121 aaPredicted RBP1.54□□□□□ -2.16
LRRC28-212ENST00000558911 SPAG11BQ08648 103 aa1.54□□□□□ -2.16
LRRC28-212ENST00000558911 SPAG11AQ6PDA7 123 aa1.54□□□□□ -2.16
LRRC28-212ENST00000558911 LINC00208Q96KT6 92 aa1.54□□□□□ -2.16
LRRC28-212ENST00000558911 CDC42SE2Q9NRR3 84 aa1.54□□□□□ -2.16
LRRC28-212ENST00000558911 SPCS1Q9Y6A9 102 aa1.54□□□□□ -2.16
LRRC28-212ENST00000558911 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.53□□□□□ -2.16
LRRC28-212ENST00000558911 A0A087WTM6 91 aa1.53□□□□□ -2.16
LRRC28-212ENST00000558911 KRTAP21-2Q3LI59 83 aa1.53□□□□□ -2.16
LRRC28-212ENST00000558911 KRTAP13-4Q3LI77 160 aa1.53□□□□□ -2.16
LRRC28-212ENST00000558911 HIGD1BQ9P298 99 aa1.53□□□□□ -2.16
LRRC28-212ENST00000558911 V9GYH0 126 aa1.53□□□□□ -2.16
LRRC28-212ENST00000558911 DNAH2Q9P225 4427 aa1.52□□□□□ -2.17
LRRC28-212ENST00000558911 VPS13BQ7Z7G8 4022 aa1.52□□□□□ -2.17
LRRC28-212ENST00000558911 A0A1W2PPM0 123 aa1.52□□□□□ -2.17
LRRC28-212ENST00000558911 CCL18P55774 89 aa1.52□□□□□ -2.17
LRRC28-212ENST00000558911 ADIRFQ15847 76 aa1.52□□□□□ -2.17
LRRC28-212ENST00000558911 Q86TA4 180 aa1.52□□□□□ -2.17
LRRC28-212ENST00000558911 FAM223AQ8IWN6 122 aa1.52□□□□□ -2.17
LRRC28-212ENST00000558911 ST20Q9HBF5 79 aa1.52□□□□□ -2.17
LRRC28-212ENST00000558911 RABAC1Q9UI14 185 aa1.52□□□□□ -2.17
LRRC28-212ENST00000558911 V9GYV3 84 aa1.52□□□□□ -2.17
LRRC28-212ENST00000558911 ZNF236Q9UL36 1845 aa1.52□□□□□ -2.17
LRRC28-212ENST00000558911 LOC285095A0A1B0GVY8 99 aa1.51□□□□□ -2.17
LRRC28-212ENST00000558911 TMEM14DPA8MWL7 114 aa1.51□□□□□ -2.17
LRRC28-212ENST00000558911 KRTAP10-10P60014 251 aa1.51□□□□□ -2.17
LRRC28-212ENST00000558911 PMCHL1Q16048 86 aa1.51□□□□□ -2.17
LRRC28-212ENST00000558911 ETDBQ3ZM63 59 aa1.51□□□□□ -2.17
LRRC28-212ENST00000558911 PPP1R1CQ8WVI7 109 aa1.51□□□□□ -2.17
LRRC28-212ENST00000558911 USF3Q68DE3 2245 aa1.5□□□□□ -2.17
LRRC28-212ENST00000558911 TRBV25-1A0A075B6N4 114 aa1.5□□□□□ -2.17
LRRC28-212ENST00000558911 TMEM170BQ5T4T1 132 aa1.5□□□□□ -2.17
LRRC28-212ENST00000558911 UNQ6190/PRO20217Q6UXQ8 127 aa1.5□□□□□ -2.17
LRRC28-212ENST00000558911 Q6ZQY7 126 aa1.5□□□□□ -2.17
LRRC28-212ENST00000558911 ZNF563Q8TA94 476 aa1.5□□□□□ -2.17
LRRC28-212ENST00000558911 CCL19Q99731 98 aa1.5□□□□□ -2.17
LRRC28-212ENST00000558911 R4GMQ9 66 aa1.5□□□□□ -2.17
LRRC28-212ENST00000558911 ARL2-SNX15V9GYD0 113 aa1.5□□□□□ -2.17
LRRC28-212ENST00000558911 LPAP08519 4548 aa1.5□□□□□ -2.17
LRRC28-212ENST00000558911 MYO7BQ6PIF6 2116 aa1.49□□□□□ -2.17
LRRC28-212ENST00000558911 FAM223BA6NKX1 122 aa1.49□□□□□ -2.17
LRRC28-212ENST00000558911 C10orf142B7Z368 130 aa1.49□□□□□ -2.17
LRRC28-212ENST00000558911 EFNA4P52798 201 aa1.49□□□□□ -2.17
LRRC28-212ENST00000558911 CAV3P56539 151 aa1.49□□□□□ -2.17
LRRC28-212ENST00000558911 KLKP1Q107X0 134 aa1.49□□□□□ -2.17
LRRC28-212ENST00000558911 WFDC2Q14508 124 aa1.49□□□□□ -2.17
LRRC28-212ENST00000558911 PCOTHQ58A44 107 aa1.49□□□□□ -2.17
LRRC28-212ENST00000558911 NMSQ5H8A3 153 aa1.49□□□□□ -2.17
LRRC28-212ENST00000558911 PSMG4Q5JS54 123 aa1.49□□□□□ -2.17
LRRC28-212ENST00000558911 ZCCHC13Q8WW36 166 aaKnown RBP1.49□□□□□ -2.17
LRRC28-212ENST00000558911 CTXND1A0A1B0GTU2 59 aa1.48□□□□□ -2.17
LRRC28-212ENST00000558911 ZNF815PA8K554 130 aa1.48□□□□□ -2.17
LRRC28-212ENST00000558911 F8VRH5 84 aa1.48□□□□□ -2.17
LRRC28-212ENST00000558911 TMEM14BQ9NUH8 114 aa1.48□□□□□ -2.17
LRRC28-212ENST00000558911 DNAH17Q9UFH2 4485 aa1.47□□□□□ -2.17
LRRC28-212ENST00000558911 TRGV1A0A0A0MS02 117 aa1.47□□□□□ -2.17
LRRC28-212ENST00000558911 F2Z2F3 143 aa1.47□□□□□ -2.17
LRRC28-212ENST00000558911 F8WEM9 126 aa1.47□□□□□ -2.17
LRRC28-212ENST00000558911 M0R135 149 aa1.47□□□□□ -2.17
LRRC28-212ENST00000558911 SAA2P0DJI9 122 aaPredicted RBP1.47□□□□□ -2.17
LRRC28-212ENST00000558911 COX6B1P14854 86 aa1.47□□□□□ -2.17
LRRC28-212ENST00000558911 SMIM11AP58511 58 aa1.47□□□□□ -2.17
LRRC28-212ENST00000558911 BAGE3Q86Y29 109 aa1.47□□□□□ -2.17
LRRC28-212ENST00000558911 Q96NJ1 140 aa1.47□□□□□ -2.17
LRRC28-212ENST00000558911 WFDC6Q9BQY6 131 aa1.47□□□□□ -2.17
LRRC28-212ENST00000558911 TRAV1-2A0A0B4J238 106 aa1.46□□□□□ -2.18
LRRC28-212ENST00000558911 H3BUT2 72 aa1.46□□□□□ -2.18
LRRC28-212ENST00000558911 BCE1O60756 84 aa1.46□□□□□ -2.18
LRRC28-212ENST00000558911 IGLC2P0DOY2 106 aa1.46□□□□□ -2.18
LRRC28-212ENST00000558911 IGLC3P0DOY3 106 aa1.46□□□□□ -2.18
LRRC28-212ENST00000558911 ACYP2P14621 99 aa1.46□□□□□ -2.18
LRRC28-212ENST00000558911 SNRPFP62306 86 aaKnown RBP1.46□□□□□ -2.18
LRRC28-212ENST00000558911 DEFA5Q01523 94 aa1.46□□□□□ -2.18
LRRC28-212ENST00000558911 BVES-AS1Q5T3Y7 98 aa1.46□□□□□ -2.18
LRRC28-212ENST00000558911 CFAP126Q5VTH2 177 aa1.46□□□□□ -2.18
LRRC28-212ENST00000558911 AMELXQ99217 191 aa1.46□□□□□ -2.18
LRRC28-212ENST00000558911 PRR15LQ9BU68 103 aa1.46□□□□□ -2.18
LRRC28-212ENST00000558911 TNXBP22105 4242 aa1.45□□□□□ -2.18
LRRC28-212ENST00000558911 SMIM31A0A1B0GVY4 71 aa1.45□□□□□ -2.18
LRRC28-212ENST00000558911 KANTRA0A1W2PQU2 76 aa1.45□□□□□ -2.18
LRRC28-212ENST00000558911 M0R3E3 92 aa1.45□□□□□ -2.18
LRRC28-212ENST00000558911 KRTAP12-1P59990 96 aa1.45□□□□□ -2.18
LRRC28-212ENST00000558911 BAGE2Q86Y30 109 aa1.45□□□□□ -2.18
LRRC28-212ENST00000558911 FDCSPQ8NFU4 85 aa1.45□□□□□ -2.18
LRRC28-212ENST00000558911 SMCO4Q9NRQ5 59 aa1.45□□□□□ -2.18
LRRC28-212ENST00000558911 LINC01558Q9Y6Z2 57 aa1.45□□□□□ -2.18
LRRC28-212ENST00000558911 ANKARQ7Z5J8 1434 aa1.44□□□□□ -2.18
LRRC28-212ENST00000558911 TRBV30A0A0K0K1B3 111 aa1.44□□□□□ -2.18
LRRC28-212ENST00000558911 NCR3O14931 201 aa1.44□□□□□ -2.18
LRRC28-212ENST00000558911 UQCR11O14957 56 aa1.44□□□□□ -2.18
LRRC28-212ENST00000558911 ZNF137PP52743 207 aa1.44□□□□□ -2.18
LRRC28-212ENST00000558911 PSENENQ9NZ42 101 aa1.44□□□□□ -2.18
LRRC28-212ENST00000558911 RGPD2P0DJD1 1756 aa1.44□□□□□ -2.18
LRRC28-212ENST00000558911 NCOA6Q14686 2063 aaPredicted RBP1.43□□□□□ -2.18
LRRC28-212ENST00000558911 A0A087WVE0 104 aa1.43□□□□□ -2.18
LRRC28-212ENST00000558911 A0A1B0GWA3 101 aa1.43□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 260.7 ms